EWM22101.1, cds8595 (CDS) Nannochloropsis gaditana

Overview
NameEWM22101.1
Unique Namecds8595
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:447371..448013 -
Alignment locationKK037249.1:447191..447270 -

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Properties
Property NameValue
Protein idEWM22101.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100039g8.4439.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:447371..448013 -
KK037249.1supercontigKK037249.1:447191..447270 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22101.1 vs. NCBI_GenBank
Match: gi|585102518|gb|EWM22101.1| (hypothetical protein Naga_100039g8 [Nannochloropsis gaditana])

HSP 1 Score: 496.123 bits (1276), Expect = 1.474e-177
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
Query:    1 MWRAAGIWDRRWPFFTLIPIVFIFSFPSHTCGYHSPQISLSLRRHVMQRPCHALQQRRHALRHALTVSLGVCLGANLTPRPLPSARAADRSGGRKGLVNILRIRAFIVTLKETLKELVDKGATSAPAEVNQQIKYLVRTVRMPESINDAAMLIESSRDREAARGVGRSGYEYLTQVIEFSGFEDMKREGVSKYATLSSPERIEFALKCLTAAEQELERYFRYFPSAVIADAQGIYESYFL 240
            MWRAAGIWDRRWPFFTLIPIVFIFSFPSHTCGYHSPQISLSLRRHVMQRPCHALQQRRHALRHALTVSLGVCLGANLTPRPLPSARAADRSGGRKGLVNILRIRAFIVTLKETLKELVDKGATSAPAEVNQQIKYLVRTVRMPESINDAAMLIESSRDREAARGVGRSGYEYLTQVIEFSGFEDMKREGVSKYATLSSPERIEFALKCLTAAEQELERYFRYFPSAVIADAQGIYESYFL
Sbjct:    1 MWRAAGIWDRRWPFFTLIPIVFIFSFPSHTCGYHSPQISLSLRRHVMQRPCHALQQRRHALRHALTVSLGVCLGANLTPRPLPSARAADRSGGRKGLVNILRIRAFIVTLKETLKELVDKGATSAPAEVNQQIKYLVRTVRMPESINDAAMLIESSRDREAARGVGRSGYEYLTQVIEFSGFEDMKREGVSKYATLSSPERIEFALKCLTAAEQELERYFRYFPSAVIADAQGIYESYFL 240          
BLAST of EWM22101.1 vs. NCBI_GenBank
Match: gi|299472708|emb|CBN80276.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 67.781 bits (164), Expect = 3.783e-10
Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 0
Query:   87 AADRSGG------RKGLVNILRIRAFIVTLKETLKELVDKGATSAPAEVNQQIKYLVRTVRMPESINDAAMLIESSRDREAARGVGRSGYEYLTQVIEFSGFEDMKREGVSKYATLSSPERIEFALKCLTAAEQELERYFRYFPSAVIADAQ 232
             A  SGG      R  L+N+ R+R     L++TL          AP  +   +K L++  ++ ES+   A  IESS DR AA   GR   EYL Q  E+   E   R G +K   LSS E +EF +  L A   +L+ +    PS  +A+A+
Sbjct:   62 GAGSSGGKATKPLRDCLLNVERVRISTKQLEDTLTN------DGAPPGLTGLVKGLIKNYKLDESLQQGAKYIESSGDRNAAASAGREALEYLAQTAEYFPVEVDDRTGATK--KLSS-EALEFTVNALIATRAKLDLFLSKVPSDALAEAR 204          
The following BLAST results are available for this feature:
BLAST of EWM22101.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102518|gb|EWM22101.1|1.474e-177100.00hypothetical protein Naga_100039g8 [Nannochloropsi... [more]
gi|299472708|emb|CBN80276.1|3.783e-1033.55conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8622rna8622Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications