EWM22078.1, cds8592 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|585102495|gb|EWM22078.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 889.026 bits (2296), Expect = 0.000e+0 Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query: 1 MTVEMELARPGLLTSPHPLRHTMNYVQTLLPFLSHRSEAEQQKCLMSLKLSQRFLCTVYFCFILPWIQAWDAPIHQEDTTLNARTATSFRPQSNLIQREYGYNETMARHFVDLCGCAYCCIRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLCDLFQMKDKENSRHMRSRGDQEVQTEELLRSTQ 424
MTVEMELARPGLLTSPHPLRHTMNYVQTLLPFLSHRSEAEQQKCLMSLKLSQRFLCTVYFCFILPWIQAWDAPIHQEDTTLNARTATSFRPQSNLIQREYGYNETMARHFVDLCGCAYCCIRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLCDLFQMKDKENSRHMRSRGDQEVQTEELLRSTQ
Sbjct: 1 MTVEMELARPGLLTSPHPLRHTMNYVQTLLPFLSHRSEAEQQKCLMSLKLSQRFLCTVYFCFILPWIQAWDAPIHQEDTTLNARTATSFRPQSNLIQREYGYNETMARHFVDLCGCAYCCIRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLCDLFQMKDKENSRHMRSRGDQEVQTEELLRSTQ 424
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|585112660|gb|EWM30033.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 179.874 bits (455), Expect = 3.777e-49 Identity = 113/298 (37.92%), Postives = 149/298 (50.00%), Query Frame = 0
Query: 97 QREYGYNETMARHFVDLCGCAYCC------IRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFP--GCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFL-HEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPF 385
Q YNET R +D AY C C C +P V V+ V +G+GFVG D + VV + F GTD +V N+ DDLD + +P GC+ C VH GF TY LR Q+ + DHP A + +TGHSLG A+AV ++L+ SL V+ + FGQPRVGN F +F+ ++ SLS C +R+ HRDP+ HLPP S GF H P EVFY N+T+ Y +CD GED SD + +D + DH+ YLG F
Sbjct: 62 QNSSFYNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLL-SLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLC-FYRLVHHRDPVPHLPPA-----SFGFHHSPFEVFY---------------TKNETY--------------YHICD-ATGEDKHCSDHYLIDPSIKDHLNYLGVLF 322
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|585108471|gb|EWM26431.1| (lipase [Nannochloropsis gaditana]) HSP 1 Score: 179.104 bits (453), Expect = 7.322e-47 Identity = 120/344 (34.88%), Postives = 164/344 (47.67%), Query Frame = 0
Query: 51 SQRFLCTVYFCFILPWIQAWDAPIHQEDTTLNARTATSFRPQ-SNLIQREYGYNETMARHFVDLCGCAYCCIRG------CDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFP--GCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPF 385
SQ F C P+I +D + ++A +A +F P S Q YN T R +D +Y C C TC +P V + + DG GFVG ++ + + + F GT + + +LDF +FP GCEGC VH GFY YL LR QV + + F HP A + +TGHSLG A+AV ++L+ SL V+ + FGQPRVGN F TF+ +R+ HRDP+ HLPP R+ GF H+P EVFY + + YIVC+ GED + SD+F VDL+ DH+ YLG P
Sbjct: 277 SQCFCCAT---VCTPFI--YDPAFDVQKVLVSATSAPTFTPAPSPSDQNRRLYNITAVRTILDYAEASYSCKTSACEAWNCSTCSRHPDTEVRRISAP--DGDGFVGYNSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLM-SLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPP-----RAFGFHHQPFEVFY-----------------------------NEDQTSYIVCND-SGEDLQCSDQFLVDLDVADHLNYLGVPM 577
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|145475475|ref|XP_001423760.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124390821|emb|CAK56362.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 162.155 bits (409), Expect = 5.311e-43 Identity = 101/299 (33.78%), Postives = 153/299 (51.17%), Query Frame = 0
Query: 102 YNETMARHFVDLCGCAYCCIR-----GCDT-CWTYPALNVTEVHSRVLDGH-GFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGC-EGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLC 392
Y+ET A + C +YC C T C P ++ ++ + + G+ G D N + IVF GT P +++N+F+D+++I FP C C VHRGFY++YLG++DQVL+ + +P+AKL ITGHSLGGA++ A + L + G RV Y+FG PRVG++AF ++ S+ A FR+T DP+ HLP GF H E +Y K F ++ V +C+ + EDPR S++ +DL+ DH YLG+ ++C
Sbjct: 32 YDETAATRYWYFCAASYCNPNVILNWSCTTPCSKTPYMDDVQIFVNATNENAGYSGYDPKHNEIIIVFRGTLPWSIKNWFEDINYIKTSFPYCTNNCQVHRGFYYSYLGIQDQVLNAAKRLTSKYPNAKLVITGHSLGGALSTHALVALTVN-GYRVDHYYSFGSPRVGDSAFFNYVK---SIYPSAKFRVTHDHDPVPHLP-----MEVQGFHHINTEAYY------------------KDFLIFHKDVK--------ICNDEKKEDPRCSNQNLLDLSVDDHCNYLGYNLAIGVLVC 295
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|954187221|gb|KRX00063.1| (hypothetical protein PPERSA_07260 [Pseudocohnilembus persalinus]) HSP 1 Score: 156.762 bits (395), Expect = 7.637e-41 Identity = 91/298 (30.54%), Postives = 141/298 (47.32%), Query Frame = 0
Query: 102 YNETMARHFVDLCGCAYCCIRGCDT------CWTYPALN-VTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLC 392
Y++ + AYC + C Y + +T + S GF G P + + I + GT + ++ + +D D+ +P C+GC VH+GF+ + GL+ HP +K+++TGHSLG A++VF A++LI + G+ Y FGQPR+GN A ++ L+ R+T H+DP+ H+PP +S GF H QE+FY SDP S + +C GEDP SD++++D N VDHV Y G+ + N LC
Sbjct: 52 YDQETGKMLAAFTQAAYCLPKKITKWKCGKPCKKYQGMQEITVIQSANKVNKGFTGYYEPLDAIIISWKGT--IKIRQWLEDFDYFKTAYPYCDGCEVHKGFWQGWEGLQSYFWLAFNKLREAHPESKIYLTGHSLGAALSVFNAMDLIEN-GITDFVWYNFGQPRIGNQAVVDYIQNNLTNRL---MRVTHHKDPVPHVPP-----KSFGFFHPAQEIFY-------------------------DKSSDP-SKSHTLCSTTNGEDPTCSDKYKLDTNVVDHVFYEGWDYVYNIGLC 312
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|954187220|gb|KRX00062.1| (hypothetical protein PPERSA_07259 [Pseudocohnilembus persalinus]) HSP 1 Score: 152.91 bits (385), Expect = 2.579e-39 Identity = 92/298 (30.87%), Postives = 140/298 (46.98%), Query Frame = 0
Query: 102 YNETMARHFVDLCGCAYCCIRGC------DTCWTYPALN-VTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLC 392
Y++ R AYC + + C Y + +T + S GF+G P + + I + GT L ++ + +DL++ ++P C+GC VHRGF+ + GL++ HP +++++TGHSLG A++VF A++LI G Y FGQPR+GN A ++ E LS R+T RDP+ HLPP + GF H QE+FY G S PE + +C GEDP S+++ + VDHV Y G+ + N LC
Sbjct: 52 YDQETGRMLAAFTQAAYCLPKKITKWKCGNPCKKYQGMQEITVIQSANKVNKGFIGYYEPLDAIVISWKGT--LKIRQWMEDLNYFKTDYPYCDGCKVHRGFWMGWQGLQNYFWVAFKKLREAHPESRIYLTGHSLGAALSVFNAMDLIQH-GYTDFVWYNFGQPRIGNQAVIDYISENLSNQL---MRVTHGRDPVPHLPP-----KDFGFSHPSQEIFYDKG-------------------------SSPEK-SHTLCSKTNGEDPECSNKYVFTTSVVDHVFYEGWDYVYNIGLC 312
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|954187207|gb|KRX00049.1| (hypothetical protein PPERSA_07246 [Pseudocohnilembus persalinus]) HSP 1 Score: 154.451 bits (389), Expect = 1.154e-38 Identity = 80/246 (32.52%), Postives = 125/246 (50.81%), Query Frame = 0
Query: 147 GFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLC 392
GF G P + + I + GT + ++ + +D D+ +P C+GC VH+GF+ + GL+ HP +K+++TGHSLG A++VF A++LI + G+ Y FGQPR+GN A ++ + L + R+T H+DP+ H+PP GF H QE+FY SDP ++I+C GEDP SD+++ D++ DHV Y G+ + N LC
Sbjct: 232 GFTGYYEPLDAIIISWKGT--IKIRQWLEDFDYFKTAYPYCDGCEVHKGFWQGWEGLQSYFWLAFNKLREAHPESKIYLTGHSLGAALSVFNAMDLIEN-GITDFVWYNFGQPRIGNKATADYIQKNL---TNKLMRVTHHKDPVPHVPP-----EDFGFYHSTQEIFY-------------------------VHSSDPNK-EHIICSDSNGEDPNCSDKYKADIDVNDHVFYEGWDYVYNIGLC 440
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|145523011|ref|XP_001447344.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124414855|emb|CAK79947.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 149.058 bits (375), Expect = 4.162e-38 Identity = 95/301 (31.56%), Postives = 147/301 (48.84%), Query Frame = 0
Query: 102 YNETMARHFVDLCGCAYC---------CIRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGC-EGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLC 392
++E A+H L +YC C + C P ++T + + G+ + +Y+VF GT P ++ N+ +D+DFI ++P C C VHRGFY+++LG++DQVL TL + +P AK+ ITGHSLGGA+A AL + + G + YTFG PRVG+ F T++++ L +R+T + DP+ HLP GF H QE +Y +L +K N S+ + +SC S+ VDL+ DH Y+G+ T + C
Sbjct: 23 FDEPFAKHLFYLTSASYCSEQHIRNWNCGKPCKEL--KPITDITMFINATNENAGYGAYHPETDEIYLVFRGTLPWSITNWIEDIDFIKTDYPYCPNNCQVHRGFYYSFLGIQDQVLTTLKSLTKKYPLAKITITGHSLGGALA-HHALVYLATRGFTISKFYTFGSPRVGDKNFFTYVNQ--QLFPGPKYRVTHNHDPVPHLPALI-----QGFHHVNQEAYYKDFLLV----------IHKKVQLCNDSLKEDDSC---------------SNANLVDLSVSDHANYMGYDMTLELLTC 288
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|145502200|ref|XP_001437079.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124404226|emb|CAK69682.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 147.517 bits (371), Expect = 1.353e-37 Identity = 95/301 (31.56%), Postives = 146/301 (48.50%), Query Frame = 0
Query: 102 YNETMARHFVDLCGCAYC---------CIRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGC-EGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLC 392
Y+E+ A+H L +YC C + C P ++T + + G+ + +Y+VF GT P ++ N+ +D+DFI ++P C C VHRGFY+++LG++DQVL+ L S +P AK+ ITGHSLGGA+A A + L + G + YTFG PRVG+ F T++++ L FRIT + DP+ HLP GF H QE +Y +L +K N ++ + +SC S+ DL+ DH Y+G+ + C
Sbjct: 23 YDESFAKHLFYLTSASYCSEQHIKSWNCGKPCKEL--KPITDITFFINATNENAGYGAYHPETDEIYLVFRGTLPWSLTNWIEDIDFIKTDYPYCPNNCEVHRGFYYSFLGIQDQVLNCLKSLSKKYPLAKITITGHSLGGALANHALVYLT-TRGFTISKFYTFGSPRVGDKNFFTYVNQ--QLFPGPKFRITHNHDPVPHLPALI-----QGFHHVNQEAYYKDYLLV----------IHKKVQMCNDNLKEDDSC---------------SNSNIADLSVSDHTNYMGYDMAVELLTC 288
BLAST of EWM22078.1 vs. NCBI_GenBank
Match: gi|118359347|ref|XP_001012913.1| (lipase family protein [Tetrahymena thermophila SB210] >gi|89294680|gb|EAR92668.1| lipase family protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 138.272 bits (347), Expect = 4.591e-34 Identity = 75/235 (31.91%), Postives = 125/235 (53.19%), Query Frame = 0
Query: 99 EYGYNETMARHFVDLCGCAYCCIR-----GCDT-CWTYPA--LNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLR--VQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGN 323
++ YNET+A+ +YC + C + C P + + ++++ L G++G A + + +VF GT P +QN+ DL+ I +++P CE C+VH+GFY + L+ Q++ + +PS+K+ +TGHSLG AM+ F ++ +I L + Y +G PRVGN A+ T+ + L + + RI DP+ HLPP P + F H E+FY + GN
Sbjct: 18 QFQYNETLAQDLAGFSLASYCNPKYLQQWNCGSACKKNPNGLTDFSYLYNKTLKASGYIGYSAHHDAIIVVFRGTVPWLIQNWIADLNTIKIQYPFCENCYVHKGFYKQFNQLKSQLIQSFTEIRQKYPSSKIFVTGHSLGAAMS-FHSMPIIFELNGNKPIDAFYNYGSPRVGNEAYATWFN--LQNFALQYGRINNAADPVPHLPPILFPFQ---FYHTNHEIFYTSFIEDGN 246 The following BLAST results are available for this feature:
BLAST of EWM22078.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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