EWM22080.1, cds8583 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|585102497|gb|EWM22080.1| (anaphase-promoting complex subunit 11 [Nannochloropsis gaditana]) HSP 1 Score: 181.415 bits (459), Expect = 3.939e-58 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFRA 86
MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFRA
Sbjct: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFRA 86
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|695396192|ref|XP_009521384.1| (hypothetical protein PHYSODRAFT_345071 [Phytophthora sojae] >gi|348686281|gb|EGZ26096.1| hypothetical protein PHYSODRAFT_345071 [Phytophthora sojae]) HSP 1 Score: 130.183 bits (326), Expect = 1.236e-37 Identity = 61/85 (71.76%), Postives = 68/85 (80.00%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKV IKRWH VATW W V++E CGIC AFEACCPDC +PGD CPPVWG CNHAFHMHC+MKWL S Q+ +Q CP CRQ W+FR
Sbjct: 9 MKVTIKRWHGVATWTWGVDEECCGICRYAFEACCPDCAMPGDGCPPVWGACNHAFHMHCLMKWLESLQSM-RQHCPMCRQDWKFR 92
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|1214696943|gb|OWZ10335.1| (Anaphase-promoting complex subunit 11 [Phytophthora megakarya]) HSP 1 Score: 129.413 bits (324), Expect = 1.691e-37 Identity = 60/85 (70.59%), Postives = 69/85 (81.18%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKV IK+WH VATW+W V++E CGIC AFEACCPDC +PGD CPPVWG CNHAFHMHC+MKWL S Q+ +Q CP CRQ W+FR
Sbjct: 1 MKVTIKKWHGVATWKWGVDEECCGICRYAFEACCPDCTMPGDGCPPVWGACNHAFHMHCLMKWLESLQSM-RQHCPMCRQDWKFR 84
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|567950514|gb|ETK76225.1| (hypothetical protein L915_17343 [Phytophthora parasitica] >gi|567979181|gb|ETL29663.1| hypothetical protein L916_17236 [Phytophthora parasitica] >gi|570940551|gb|ETP05808.1| hypothetical protein F441_17691 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 129.798 bits (325), Expect = 2.278e-37 Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKV IKRWH VATW+W V++E CGIC AFEACCP+C +PGD CPPVWG CNHAFHMHC++KWL S Q+ +Q CP CRQ W+FR
Sbjct: 17 MKVTIKRWHGVATWKWGVDEECCGICRYAFEACCPECTMPGDGCPPVWGACNHAFHMHCLVKWLESLQSM-RQHCPMCRQDWKFR 100
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|570970799|gb|ETP33918.1| (hypothetical protein F442_17671 [Phytophthora parasitica P10297]) HSP 1 Score: 129.413 bits (324), Expect = 2.627e-37 Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKV IKRWH VATW+W V++E CGIC AFEACCP+C +PGD CPPVWG CNHAFHMHC++KWL S Q+ +Q CP CRQ W+FR
Sbjct: 17 MKVTIKRWHGVATWKWGVDEECCGICRYAFEACCPECTMPGDGCPPVWGACNHAFHMHCLVKWLESLQSM-RQHCPMCRQDWKFR 100
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|675174881|ref|XP_008896325.1| (hypothetical protein PPTG_04211 [Phytophthora parasitica INRA-310] >gi|566013079|gb|ETI35990.1| hypothetical protein F443_17814 [Phytophthora parasitica P1569] >gi|568008668|gb|ETL82885.1| hypothetical protein L917_17069 [Phytophthora parasitica] >gi|568038592|gb|ETM36118.1| hypothetical protein L914_17139 [Phytophthora parasitica] >gi|568104031|gb|ETN18688.1| hypothetical protein PPTG_04211 [Phytophthora parasitica INRA-310] >gi|570316761|gb|ETO64709.1| hypothetical protein F444_17851 [Phytophthora parasitica P1976]) HSP 1 Score: 127.872 bits (320), Expect = 7.357e-37 Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKV IKRWH VATW+W V++E CGIC AFEACCP+C +PGD CPPVWG CNHAFHMHC++KWL S Q+ +Q CP CRQ W+FR
Sbjct: 1 MKVTIKRWHGVATWKWGVDEECCGICRYAFEACCPECTMPGDGCPPVWGACNHAFHMHCLVKWLESLQSM-RQHCPMCRQDWKFR 84
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|1191053786|ref|XP_020904846.1| (anaphase-promoting complex subunit 11-like [Exaiptasia pallida]) HSP 1 Score: 126.716 bits (317), Expect = 1.983e-36 Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKVKIKRW VATW+W ND+ CGIC AF+ CCPDC IPGDDCP VWG C+H FHMHCI+KWLNSQ ++Q CP CRQ+W+F+
Sbjct: 1 MKVKIKRWIGVATWRWVANDDSCGICRMAFDGCCPDCKIPGDDCPLVWGKCSHVFHMHCILKWLNSQ--LHQQLCPMCRQEWQFK 83
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|1160119598|ref|XP_020386128.1| (anaphase-promoting complex subunit 11 [Rhincodon typus]) HSP 1 Score: 126.716 bits (317), Expect = 2.338e-36 Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
M+VK+KRW+A+ATW W NDE CGIC TAF CCPDC +PGDDCP VWG C+H FHMHCI+KWLNSQQ +Q CP CRQ+W+F+
Sbjct: 1 MRVKVKRWNAIATWFWVANDENCGICRTAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLNSQQ--VQQHCPMCRQEWKFK 83
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|1173926822|gb|OQR80959.1| (anaphase-promoting complex subunit 11-like [Achlya hypogyna]) HSP 1 Score: 126.716 bits (317), Expect = 2.380e-36 Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKV+IKR H VATW W V++E CGIC AFEACCPDC PGD CPPVWG CNHAFHMHC++KWL S Q + +Q CP CRQ+W+FR
Sbjct: 1 MKVRIKRIHGVATWSWGVDEECCGICRYAFEACCPDCSAPGDGCPPVWGNCNHAFHMHCLVKWLESLQ-STRQHCPMCRQEWKFR 84
BLAST of EWM22080.1 vs. NCBI_GenBank
Match: gi|813114441|ref|XP_012195377.1| (anaphase-promoting complex subunit 11 [Saprolegnia parasitica CBS 223.65] >gi|641539892|gb|KDO33687.1| anaphase-promoting complex subunit 11 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 126.331 bits (316), Expect = 2.765e-36 Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = 0
Query: 1 MKVKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEFR 85
MKV IKR H VATW W V++E CGIC AFEACCPDC PGD CPPVWG CNHAFHMHC++KWL S Q+A +Q CP CRQ+W+FR
Sbjct: 1 MKVTIKRIHGVATWSWGVDEECCGICRCAFEACCPDCSAPGDACPPVWGNCNHAFHMHCLVKWLESLQSA-RQHCPMCRQEWKFR 84 The following BLAST results are available for this feature:
BLAST of EWM22080.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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