EWM29842.1, cds858 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|585112423|gb|EWM29842.1| (Protein of unknown function DUF1517 [Nannochloropsis gaditana]) HSP 1 Score: 845.114 bits (2182), Expect = 0.000e+0 Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0
Query: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKIRIQDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKIRIQDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL
Sbjct: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKIRIQDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|585112422|gb|EWM29841.1| (Protein of unknown function DUF1517 [Nannochloropsis gaditana]) HSP 1 Score: 831.247 bits (2146), Expect = 0.000e+0 Identity = 413/417 (99.04%), Postives = 413/417 (99.04%), Query Frame = 0
Query: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKIRIQDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPK DGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL
Sbjct: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPK----DGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|553195590|ref|XP_005856177.1| (membrane protein [Nannochloropsis gaditana CCMP526] >gi|422292880|gb|EKU20181.1| membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 491.886 bits (1265), Expect = 6.507e-173 Identity = 243/244 (99.59%), Postives = 244/244 (100.00%), Query Frame = 0
Query: 174 LVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
+VHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL
Sbjct: 1 MVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 244
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|656720236|gb|KEF42941.1| (hypothetical protein ER33_03485 [Cyanobium sp. CACIAM 14]) HSP 1 Score: 87.8113 bits (216), Expect = 1.177e-15 Identity = 69/204 (33.82%), Postives = 102/204 (50.00%), Query Frame = 0
Query: 214 EGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
+G V + Q+ L R L L+RLA A+T+TS+GL + SL LLR + WV A G+ +AE FN SM+ER K E T +A RR + + AS A +V+TL+VA RN + + +G+AE L SL++ A ++LA++V W P+G GE+LS + +P+L L
Sbjct: 129 DGPVSIAQIQVGLL-ASARDLQDDLRRLAASADTSTSSGLQRVLQETSLSLLRHPDLWVYANGEVGQVP-FTSAESTFNRLSMQERSKLERELTAN------VAGRRFSAPAAVAPGASD-AASDFIVVTLLVASRN----RLAIKGAGTAEDLRESLQKLGAV----GADDLLALEVIWQPEGAGEVLSTEQLITAYPDLQHL 315
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|949108659|gb|KRO93606.1| (hypothetical protein ABR96_08565 [cyanobacterium BACL30 MAG-120619-bin27]) HSP 1 Score: 85.5001 bits (210), Expect = 7.082e-15 Identity = 69/214 (32.24%), Postives = 109/214 (50.93%), Query Frame = 0
Query: 204 RRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
R + +G G +G V + Q+ L R L L+RLA A+T+ +AGL +L +L LLR + WV A + G+ A+AE FN SM ER K E T + +R ++S +A S A + +TL+VA R+ + + SGSA+ + SL++ A ++LA++V W P+G GE+LS ++ +P+L L
Sbjct: 128 RSDLVGGGRPDGPVTISQLQVGLL-ASARQLQTDLRRLAGSADTSHAAGLQALLQETTLALLRHPDLWVYANSEVGQVP-FASAESTFNRLSMTERSKLQREVTTN------VGGKRFSDDSV--AAGDSDASSDFIAVTLLVASRS----RLALKGSGSADQVRDSLQQLGAV----GAADLLAIEVIWQPEGAGEVLSTEELLTAYPQLQHL 323
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|1200347588|gb|OUU67506.1| (hypothetical protein CBC26_06095 [Synechococcus sp. TMED66]) HSP 1 Score: 85.5001 bits (210), Expect = 8.279e-15 Identity = 65/203 (32.02%), Postives = 103/203 (50.74%), Query Frame = 0
Query: 215 GDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
G V L+ QI L + L L++LA A+T+TS+GL + +L LLR E WV A SG A+E FN SM ER K E T + R GN ++ SS+ + A + +V+T++VA R + + +++ S EAL +L + + +++A++V W PDG G++LS ++ +P L L
Sbjct: 139 GPVSLLQMQIGLL-ASAKSLQTDLRQLAASADTSTSSGLQRVLQETTLALLRQPELWVYANVESGSVP-FNASESTFNRLSMTERSKLRAEITTN------VGGVRNGNTAELSSSGDADATNEFIVVTVLVASR----QSVKLKQADSGEALRETLRILGS----TSSSDLMALEVIWQPDGSGDVLSADELVMAYPNLQHL 325
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|351675446|gb|EHA58607.1| (hypothetical protein Syn8016DRAFT_2923 [Synechococcus sp. WH 8016]) HSP 1 Score: 83.5741 bits (205), Expect = 2.412e-14 Identity = 63/203 (31.03%), Postives = 102/203 (50.25%), Query Frame = 0
Query: 215 GDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
G V ++ QI L + L L++LA A+T+TS+GL + +L LLR E WV A SG A+E FN SM ER K E T + R GN ++ SS+ + A + +V+T++VA R + + +++ S E L +L + + +++A++V W PDG G++LS ++ +P L L
Sbjct: 114 GPVSMLQMQIGLL-ASAKALQTDLRQLAASADTSTSSGLQRVLQETTLALLRQPELWVYANVESGSVP-FNASESTFNRLSMTERSKLRAEITTN------VGGVRNGNAAELSSSGDADATNEFIVVTVLVASR----QSVKLKQANSGEDLRETLRILGS----TSSSDLMALEVIWQPDGSGDVLSADELVMAYPNLQHL 300
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|1137233961|gb|OMO96457.1| (hypothetical protein COLO4_15279 [Corchorus olitorius]) HSP 1 Score: 84.3445 bits (207), Expect = 3.808e-14 Identity = 60/183 (32.79%), Postives = 99/183 (54.10%), Query Frame = 0
Query: 232 RGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPEL 414
R L + L R+AE A+T+TS GL+ + + ++ LLR E ++A ++ M E+ FN+ S+ ER K+ E+ V RRK S++ S S+ + LV+T++VA G+H LP +GS + L+ +L++ A+ K LAV+V WTP + + LS ++ +PEL
Sbjct: 238 RSLQRELNRIAEDADTSTSKGLSYVLTETAVALLRHPEYCISAYSSVNVKYSMDGGEKHFNQLSIEERAKF-----DEETLVNVDNVRRKNKASQKPSGFSN----EYLVVTILVAAE---GEHKLPPINGSKD-LKEALQKLASITTSK----TLAVEVLWTPQDENDTLSEKELLEDYPEL 403
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|740172171|ref|WP_038015021.1| (DUF1517 domain-containing protein [Synechococcus sp. WH 8016]) HSP 1 Score: 82.8037 bits (203), Expect = 5.006e-14 Identity = 63/203 (31.03%), Postives = 102/203 (50.25%), Query Frame = 0
Query: 215 GDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
G V ++ QI L + L L++LA A+T+TS+GL + +L LLR E WV A SG A+E FN SM ER K E T + R GN ++ SS+ + A + +V+T++VA R + + +++ S E L +L + + +++A++V W PDG G++LS ++ +P L L
Sbjct: 135 GPVSMLQMQIGLL-ASAKALQTDLRQLAASADTSTSSGLQRVLQETTLALLRQPELWVYANVESGSVP-FNASESTFNRLSMTERSKLRAEITTN------VGGVRNGNAAELSSSGDADATNEFIVVTVLVASR----QSVKLKQANSGEDLRETLRILGST----SSSDLMALEVIWQPDGSGDVLSADELVMAYPNLQHL 321
BLAST of EWM29842.1 vs. NCBI_GenBank
Match: gi|1137188191|gb|OMO62272.1| (hypothetical protein CCACVL1_22923 [Corchorus capsularis]) HSP 1 Score: 83.5741 bits (205), Expect = 5.628e-14 Identity = 72/235 (30.64%), Postives = 117/235 (49.79%), Query Frame = 0
Query: 180 IRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPEL 414
I K + VFGG +G+ A + L + V + Q+ L R L + L R+AE A+T+TS GL+ + + ++ LLR E ++A ++ A E+ FN+ S+ ER K+ E+ V RRKG S++ S S+ + LV+T++VA G H LP +GS + L+ +L++ A+ K L V+V WTP + + LS ++ +PEL
Sbjct: 165 IGKFFLVVFGGLLGLFFV-ATLVDMLSSLQRTSV------IKLQVGLSGM-ARSLQRELNRIAEVADTSTSKGLSYVLTETAVALLRHPEYCISAYSSVDVKYSTDAGEKHFNKLSIEERAKF-----DEETLVNVDNLRRKGKASQKPSGFSN----EYLVVTILVAAE---GVHKLPPINGSKD-LKEALQKLASITTSK----TLGVEVLWTPQVENDTLSEKELLEDYPEL 374 The following BLAST results are available for this feature:
BLAST of EWM29842.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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