EWM22097.1, cds8578 (CDS) Nannochloropsis gaditana

Overview
NameEWM22097.1
Unique Namecds8578
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:387999..390839 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22097.1
Productrna polymerase ii-associated protein 3
Orig transcript idgnl|cribi|Naga_100039g27.4435.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:387999..390839 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom
IPR025986RPAP3-like_C
IPR013105TPR_2
IPR019734TPR_repeat
Homology
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|585102514|gb|EWM22097.1| (rna polymerase ii-associated protein 3 [Nannochloropsis gaditana])

HSP 1 Score: 1918.28 bits (4968), Expect = 0.000e+0
Identity = 946/946 (100.00%), Postives = 946/946 (100.00%), Query Frame = 0
Query:    1 MDLVSELFLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEALAPKVEDGNEDEEEVRAAESLLAATRQTCDSLPAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLRWGAGSMDGKVAREALALLHQMDEEGRACSQDGKDAVQGLRDETSAPASTPSSCVPSGPRDREGSASKPEKGYPEATPRPVPLADISNETCSMEMPSLEADFPPPLAEGFRRVPVVEGEAGRPSSIRALSTASPQAPREVSLPLHTLHPRASFPQEASGERMRPSNDTLVQTNVSSEGASGGGSAPVKGKRSRNGGPLRETLALKEMGNKALARGDLARAIQYYSEGIERDAGHLPLYNNRCLAYLRQGLWEEARRDASRVLESEPENIKARYRRGKAACRAAESRVARVEEVLGSTAGAGESLKGDRDPTVPLEAAEKALTAALKDLDWILERDKKNTEAQKEQGVARLLLSKLQTMRQPSTLPAARKQSSKTNKSLNSPVPDVAPSDGTVGALIKENLAQEPEDVLLAQRTGLEASHGARTGGKKGGETKGGSWFVREVSTQPRQCPAEPVRRVRVVEESCGSRDPVPCSTGARQPKDRPFPPAVDVLKVPPPPKTVTMLETHWRTLKKRGDVGYLAAYLRGFNPKTFPRVFKRVTDQDVVNDVFSVTAQVFCQGKDKGDAKMVCKVLEGMACVESFEMMRLLMSDVDKENIKAAFRFLEERSSSLPNVQASGRDSRDMKDAKMVLEDLRRKYFP 946
            MDLVSELFLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEALAPKVEDGNEDEEEVRAAESLLAATRQTCDSLPAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLRWGAGSMDGKVAREALALLHQMDEEGRACSQDGKDAVQGLRDETSAPASTPSSCVPSGPRDREGSASKPEKGYPEATPRPVPLADISNETCSMEMPSLEADFPPPLAEGFRRVPVVEGEAGRPSSIRALSTASPQAPREVSLPLHTLHPRASFPQEASGERMRPSNDTLVQTNVSSEGASGGGSAPVKGKRSRNGGPLRETLALKEMGNKALARGDLARAIQYYSEGIERDAGHLPLYNNRCLAYLRQGLWEEARRDASRVLESEPENIKARYRRGKAACRAAESRVARVEEVLGSTAGAGESLKGDRDPTVPLEAAEKALTAALKDLDWILERDKKNTEAQKEQGVARLLLSKLQTMRQPSTLPAARKQSSKTNKSLNSPVPDVAPSDGTVGALIKENLAQEPEDVLLAQRTGLEASHGARTGGKKGGETKGGSWFVREVSTQPRQCPAEPVRRVRVVEESCGSRDPVPCSTGARQPKDRPFPPAVDVLKVPPPPKTVTMLETHWRTLKKRGDVGYLAAYLRGFNPKTFPRVFKRVTDQDVVNDVFSVTAQVFCQGKDKGDAKMVCKVLEGMACVESFEMMRLLMSDVDKENIKAAFRFLEERSSSLPNVQASGRDSRDMKDAKMVLEDLRRKYFP
Sbjct:    1 MDLVSELFLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEALAPKVEDGNEDEEEVRAAESLLAATRQTCDSLPAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLRWGAGSMDGKVAREALALLHQMDEEGRACSQDGKDAVQGLRDETSAPASTPSSCVPSGPRDREGSASKPEKGYPEATPRPVPLADISNETCSMEMPSLEADFPPPLAEGFRRVPVVEGEAGRPSSIRALSTASPQAPREVSLPLHTLHPRASFPQEASGERMRPSNDTLVQTNVSSEGASGGGSAPVKGKRSRNGGPLRETLALKEMGNKALARGDLARAIQYYSEGIERDAGHLPLYNNRCLAYLRQGLWEEARRDASRVLESEPENIKARYRRGKAACRAAESRVARVEEVLGSTAGAGESLKGDRDPTVPLEAAEKALTAALKDLDWILERDKKNTEAQKEQGVARLLLSKLQTMRQPSTLPAARKQSSKTNKSLNSPVPDVAPSDGTVGALIKENLAQEPEDVLLAQRTGLEASHGARTGGKKGGETKGGSWFVREVSTQPRQCPAEPVRRVRVVEESCGSRDPVPCSTGARQPKDRPFPPAVDVLKVPPPPKTVTMLETHWRTLKKRGDVGYLAAYLRGFNPKTFPRVFKRVTDQDVVNDVFSVTAQVFCQGKDKGDAKMVCKVLEGMACVESFEMMRLLMSDVDKENIKAAFRFLEERSSSLPNVQASGRDSRDMKDAKMVLEDLRRKYFP 946          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|553192398|ref|XP_005855564.1| (rna polymerase ii associated protein 3, partial [Nannochloropsis gaditana CCMP526] >gi|422293495|gb|EKU20795.1| rna polymerase ii associated protein 3, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 494.582 bits (1272), Expect = 1.760e-166
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query:   76 GKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEALAPKVEDGNEDEEEVRAAESLLAATRQTCDSLPAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLRWGAGSMDGKV 320
            GKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEALAPKVEDGNEDEEEVRAAESLLAATRQTCDSLPAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLRWGAGSMDGKV
Sbjct:    1 GKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEALAPKVEDGNEDEEEVRAAESLLAATRQTCDSLPAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLRWGAGSMDGKV 245          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|570318899|gb|ETO66847.1| (hypothetical protein F444_16074 [Phytophthora parasitica P1976])

HSP 1 Score: 129.798 bits (325), Expect = 2.096e-28
Identity = 104/332 (31.33%), Postives = 152/332 (45.78%), Query Frame = 0
Query:    8 FLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGA-------REGTDYRAPTI--VSSKSMQEALAPKVEDGNEDEEEVRA----------AESLLAATRQTCDSL----------PAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLR 310
            F + H   + P  I   +LD  F++ C D   L+GIL  L+SGK+G   DLE+  +DR+    P + R K+T +R      E+  E   L  W A +  +++AL                  P    L PVR  ++    +S  V A       ++    +A TI     +S ++    K  D   D+E  RA           E   AA ++  +SL          P  R + A   K++GN  FK  E   AL  YT+S+ ++  D  +  NRALV++R+  +  AE DCT A   DP+Y K W RRG  R +RGK AE+ +D EE LR
Sbjct:   11 FFSLHT--RKPKTIDVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPDLEKATEDRILAVLPERERTKITGMRCGPTANELTTEIDELASWAAAMDVKNEALKRQT--------------PFKRELPPVRGQKSSREMQSEWVRAPTKLASTKKAEQKKAKTIPAYDFRSWEKYDVDKALDEI-DQESERAREQARMQQEEQEKRAAARKRELESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAYDDTDAILYANRALVHLRMKNFATAEDDCTRATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALR 325          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|953490768|emb|CEG46422.1| (FOG: TPR repeat [Plasmopara halstedii])

HSP 1 Score: 129.798 bits (325), Expect = 2.228e-28
Identity = 95/324 (29.32%), Postives = 157/324 (48.46%), Query Frame = 0
Query:    8 FLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATA----------VESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEALAPKVEDGNEDEEEVRAAESL-LAATRQTCDSL----------PAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLR 310
            F A H   + P  I   +LD  F++ C +   L+GIL  L+SGK+G   +LE+  ++R+    P + R K+ ++R++    E+  E   L  W A +  R++AL+  A           + ++  ELV   R  ++++   R       +  + + A    D+R+     +    E +  + +   +   + +A + + L A +Q   SL          P  R + A   K++GN  FK  E   AL  YT+S+ ++  D  +  NRALV++RL  +  AE D T AI  +P+Y K W RRG  R +RGK AE+ +D EE LR
Sbjct:   11 FFALHN--RKPKTIDVEMLDYGFVERCTNLDELKGILVTLRSGKEGRYPELEKATENRILAVLPERERKKIISMRSRLSANEVTTEVDELASWAAAMDLRNEALIRQAPLKREHPPVRGQKALQSELV---RDQAEKINHKR-------AEEKSLKAISAYDFRSWEKYDADKALEDIDAETDRARQQARQQQAEQDMRLVARKQELQSLSKSVELDKLEPETRKLYAGYEKQKGNDCFKANEVETALLHYTRSIAYDDTDAIIYANRALVHLRLKNFAAAEDDATRAILLNPAYLKGWSRRGMTRYRRGKYAESIQDFEEALR 322          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|566015165|gb|ETI38076.1| (hypothetical protein F443_16089 [Phytophthora parasitica P1569] >gi|567952624|gb|ETK78296.1| hypothetical protein L915_15634 [Phytophthora parasitica] >gi|567981283|gb|ETL31726.1| hypothetical protein L916_15530 [Phytophthora parasitica] >gi|568040675|gb|ETM38123.1| hypothetical protein L914_15485 [Phytophthora parasitica] >gi|570942704|gb|ETP07961.1| hypothetical protein F441_15918 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 129.413 bits (324), Expect = 2.258e-28
Identity = 103/332 (31.02%), Postives = 150/332 (45.18%), Query Frame = 0
Query:    8 FLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGA-------REGTDYRAPTI--VSSKSMQEALAPKVEDGNEDEEEVRA----------AESLLAATRQTCDSL----------PAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLR 310
            F + H   + P  I   +LD  F++ C D   L+GIL  L+SGK+G   DLE+  +DR+    P + R K+T +R      E+  E   L  W A +               +  E +    P    L PVR  ++    +S  V A       ++    +A TI     +S ++    K  D   D+E  RA           E   AA ++  +SL          P  R + A   K++GN  FK  E   AL  YT+S+ ++  D  +  NRALV++R+  +  AE DCT A   DP+Y K W RRG  R +RGK AE+ +D EE LR
Sbjct:   11 FFSLHT--RKPKTIDVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPDLEKATEDRILAVLPERERTKITGMRCGPTANELTTEIDELASWAAAM--------------DVKNEALKRQTPFKRELPPVRGQKSSREMQSEWVRAPTKLASTKKAEQKKAKTIPAYDFRSWEKYDVDKALD-EIDQESERAREQARMQQEEQEKRAAARKRELESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAYDDTDAILYANRALVHLRMKNFATAEDDCTRATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALR 325          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|570973345|gb|ETP36006.1| (hypothetical protein F442_15940 [Phytophthora parasitica P10297])

HSP 1 Score: 129.413 bits (324), Expect = 2.322e-28
Identity = 104/332 (31.33%), Postives = 152/332 (45.78%), Query Frame = 0
Query:    8 FLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGA-------REGTDYRAPTI--VSSKSMQEALAPKVEDGNEDEEEVRA----------AESLLAATRQTCDSL----------PAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLR 310
            F + H   + P  I   +LD  F++ C D   L+GIL  L+SGK+G   DLE+  +DR+    P + R K+T +R      E+  E   L  W A +  +++AL                  P    L PVR  ++    +S  V A       ++    +A TI     +S ++    K  D   D+E  RA           E   AA ++  +SL          P  R + A   K++GN  FK  E   AL  YT+S+ ++  D  +  NRALV++R+  +  AE DCT A   DP+Y K W RRG  R +RGK AE+ +D EE LR
Sbjct:   11 FFSLHT--RKPKTIDVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPDLEKATEDRILAVLPERERTKITGMRCGPTANELTTEIDELASWAAAMDVKNEALKRQT--------------PFKRELPPVRGQKSSREMQSEWVRAPTNLASTKKAEQKKAKTIPAYDFRSWEKYDVDKALDEI-DQESERAREQARMQQEEQEKRAAARKRELESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAYDDTDAILYANRALVHLRMKNFATAEDDCTRATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALR 325          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|970658138|gb|KUF95939.1| (Sperm-associated antigen 1 [Phytophthora nicotianae])

HSP 1 Score: 129.413 bits (324), Expect = 2.573e-28
Identity = 104/332 (31.33%), Postives = 152/332 (45.78%), Query Frame = 0
Query:    8 FLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGA-------REGTDYRAPTI--VSSKSMQEALAPKVEDGNEDEEEVRA----------AESLLAATRQTCDSL----------PAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLR 310
            F + H   + P  I   +LD  F++ C D   L+GIL  L+SGK+G   DLE+  +DR+    P + R K+T +R      E+  E   L  W A +  +++AL                  P    L PVR  ++    +S  V A       ++    +A TI     +S ++    K  D   D+E  RA           E   AA ++  +SL          P  R + A   K++GN  FK  E   AL  YT+S+ ++  D  +  NRALV++R+  +  AE DCT A   DP+Y K W RRG  R +RGK AE+ +D EE LR
Sbjct:   11 FFSLHT--RKPKTIDVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPDLEKATEDRILAVLPERERTKITRMRCGPTANELTTEIDELASWAAAMDVKNEALKRQT--------------PFKRELPPVRGQKSSREMQSEWVRAPTNLASTKKAEQKKAKTIPAYDFRSWEKYDVDKALDEI-DQESERAREQARMQQEEQEKRAAARKRELESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAYDDTDAILYANRALVHLRMKNFATAEDDCTRATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALR 325          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|675204559|ref|XP_008911164.1| (hypothetical protein PPTG_15644 [Phytophthora parasitica INRA-310] >gi|568088534|gb|ETN03391.1| hypothetical protein PPTG_15644 [Phytophthora parasitica INRA-310])

HSP 1 Score: 129.413 bits (324), Expect = 2.721e-28
Identity = 103/332 (31.02%), Postives = 150/332 (45.18%), Query Frame = 0
Query:    8 FLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGA-------REGTDYRAPTI--VSSKSMQEALAPKVEDGNEDEEEVRA----------AESLLAATRQTCDSL----------PAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLR 310
            F + H   + P  I   +LD  F++ C D   L+GIL  L+SGK+G   DLE+  +DR+    P + R K+T +R      E+  E   L  W A +               +  E +    P    L PVR  ++    +S  V A       ++    +A TI     +S ++    K  D   D+E  RA           E   AA ++  +SL          P  R + A   K++GN  FK  E   AL  YT+S+ ++  D  +  NRALV++R+  +  AE DCT A   DP+Y K W RRG  R +RGK AE+ +D EE LR
Sbjct:   11 FFSLHT--RKPKTIDVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPDLEKATEDRILAVLPERERTKITRMRCGPTANELTTEIDELASWAAAM--------------DVKNEALKRQTPFKRELPPVRGQKSSREMQSEWVRAPTKLASTKKAEQKKAKTIPAYDFRSWEKYDVDKALDEI-DQESERAREQARMQQEEQEKRAAARKRELESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAYDDTDAILYANRALVHLRMKNFATAEDDCTRATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALR 325          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|568010771|gb|ETL84954.1| (hypothetical protein L917_15352 [Phytophthora parasitica])

HSP 1 Score: 129.028 bits (323), Expect = 3.218e-28
Identity = 103/332 (31.02%), Postives = 150/332 (45.18%), Query Frame = 0
Query:    8 FLAGHEDEKPPIRITPALLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRPNSDRLTPVRPMRTVTASRSRVVGA-------REGTDYRAPTI--VSSKSMQEALAPKVEDGNEDEEEVRA----------AESLLAATRQTCDSL----------PAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVLR 310
            F + H   + P  I   +LD  F++ C D   L+GIL  L+SGK+G   DLE+  +DR+    P + R K+T +R      E+  E   L  W A +               +  E +    P    L PVR  ++    +S  V A       ++    +A TI     +S ++    K  D   D+E  RA           E   AA ++  +SL          P  R + A   K++GN  FK  E   AL  YT+S+ ++  D  +  NRALV++R+  +  AE DCT A   DP+Y K W RRG  R +RGK AE+ +D EE LR
Sbjct:   11 FFSLHT--RKPKTIDVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPDLEKATEDRILAVLPERERTKITRMRCGPTANELTTEIDELASWAAAM--------------DVKNEALKRQTPFKRELPPVRGQKSSREMQSEWVRAPTKLASTKKAEQKKAKTIPAYDFRSWEKYDVDKALDEI-DQESERAREQARMQQEEQEKRAAARKREFESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAYDDTDAILYANRALVHLRMKNFATAEDDCTRATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALR 325          
BLAST of EWM22097.1 vs. NCBI_GenBank
Match: gi|1173929802|gb|OQR82971.1| (hypothetical protein ACHHYP_15288 [Achlya hypogyna])

HSP 1 Score: 120.939 bits (302), Expect = 1.791e-25
Identity = 95/303 (31.35%), Postives = 147/303 (48.51%), Query Frame = 0
Query:   25 LLDANFIQSCDDPKVLRGILRRLKSGKDGLSADLEREVKDRLWLFSPAQVRGKVTTLRAQTPPEEIADEEARLEKWTAEICQRDKALLATAVESSIGGELVDLDRP---NSDRLTPVRP-----MRTVTASRSRVVGAREGTDYRAPTIVSSKSMQEAL----APKVEDGNEDEEEV------RAAESLLAATRQTCDSLPAQRMVMAASLKEEGNAFFKRGEYAKALASYTKSLGFNALDPAVCGNRALVYMRLGEWVKAEVDCTLAIARDPSYAKAWLRRGTIRRQRGKRAEARKDLEEVL 309
            +LD ++++ C D ++L+ IL  L+SGK+G    LER  + +L    P   R ++  LR+Q    +I  E+  L  W  ++    +A L    E +     V   RP      + +P  P     M T TA++ +   A    D+RA      +  +  L      K E+  +  EE+      R AE+ +  +    +  P +R V A   K +GN  FK GE  +A+  Y++SL ++  +  V  NRAL ++RL  + KAE DC+ AI  D SY KAW RRG  R +RGK +EA  D  + L
Sbjct:   25 MLDYDYVEKCTDVELLKNILAVLQSGKEGKYPQLERATEAQLLKVLPQSERDRIERLRSQPSYSDIDGEKQALASWERDM----EAKLRRFEEEAQHKSAVPRQRPAVRGRPQTSPAAPLVQEVMATTTATKKK--QAIPAYDWRAWEKYDVEKAEAELDMEEVRKAEESRKQREELAAHAKRRQAEANMPISVDVENLTPTEREVYALHEKHKGNECFKLGENDEAILYYSRSLAYDPTNAIVHANRALTHLRLQNFAKAEDDCSRAIELDSSYVKAWSRRGMTRFRRGKYSEAVADFTQAL 321          
The following BLAST results are available for this feature:
BLAST of EWM22097.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102514|gb|EWM22097.1|0.000e+0100.00rna polymerase ii-associated protein 3 [Nannochlor... [more]
gi|553192398|ref|XP_005855564.1|1.760e-166100.00rna polymerase ii associated protein 3, partial [N... [more]
gi|570318899|gb|ETO66847.1|2.096e-2831.33hypothetical protein F444_16074 [Phytophthora para... [more]
gi|953490768|emb|CEG46422.1|2.228e-2829.32FOG: TPR repeat [Plasmopara halstedii][more]
gi|566015165|gb|ETI38076.1|2.258e-2831.02hypothetical protein F443_16089 [Phytophthora para... [more]
gi|570973345|gb|ETP36006.1|2.322e-2831.33hypothetical protein F442_15940 [Phytophthora para... [more]
gi|970658138|gb|KUF95939.1|2.573e-2831.33Sperm-associated antigen 1 [Phytophthora nicotiana... [more]
gi|675204559|ref|XP_008911164.1|2.721e-2831.02hypothetical protein PPTG_15644 [Phytophthora para... [more]
gi|568010771|gb|ETL84954.1|3.218e-2831.02hypothetical protein L917_15352 [Phytophthora para... [more]
gi|1173929802|gb|OQR82971.1|1.791e-2531.35hypothetical protein ACHHYP_15288 [Achlya hypogyna... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8605rna8605Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications