EWM22086.1, cds8575 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|585102503|gb|EWM22086.1| (hypothetical protein Naga_100039g34 [Nannochloropsis gaditana]) HSP 1 Score: 1812.74 bits (4694), Expect = 0.000e+0 Identity = 911/911 (100.00%), Postives = 911/911 (100.00%), Query Frame = 0 Query: 1 MDHSTAVPASSITSTTNFGGSTGNSVASANTSTIIKTGKPSIMAPGFPSPPFSLPGASLYGMGFPPPAHSGNATHLPQNLFAPPPGVGGGVMDPFHPQGGPQQHLHNLHRPGGDMLAAGHSSGGGGGGGGRGRGEQHRGGAARPSEEGPVVSSGPLVGGTEKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDGDGGEDDDDSASEEDDTEDEDDGGGGRGGGKFSGVGVSRGGFVSPSPPSTREKDKGRPGSRTGGGLTTISTGLAGIAGGVRGSGRKSPKALPPAGSRVPSPFSPMAASPGANSGLSPSPNPMMAYQGLFNKAQMGALVGTGGQANSHAGTRNFSSLPGFPALNAFAPHGPFGSQTPAHSPPFSNLTSIPAQSPPNFPFFDFNAAAAAAAAAAAGGFPGFPMGAPAGPSPFSPLNAYQMALFQQQHQQQLQAAHMAMSMQQQQQQQQQQQQQQQQQQQQQQQQQHAPAPVPPSRRRASPSAQAKRQQQQEQDLKIPLSSATHPLEGRKDRQNGSGEKRDGSSPSSLGQALTPQADKAGVGEAGNIQKPSSGSASSTPPTGHSAFQSTYPGSASSSTGGSHAGSAEKKGAKTTGDETDVLAALVSLGSHPRSSSSASSSPKASEGGDGSSSSSRVSDSGSVGGEEGPAGGFGGGDKAGVRASEVEAGARDEGGREKEEGEAGMEGRRREEEESGKTAAEIATGGEVGKEGGAQERAQEDAGPLSALLGSRREGEKDVGEETCGQEEVGAGAGGGEEWKRKATSEEMEGSGCGKKLRVGEDDKQGQESVILGMAMGAKKPLAEEEKEGEAGERVPAKERGQ 911 MDHSTAVPASSITSTTNFGGSTGNSVASANTSTIIKTGKPSIMAPGFPSPPFSLPGASLYGMGFPPPAHSGNATHLPQNLFAPPPGVGGGVMDPFHPQGGPQQHLHNLHRPGGDMLAAGHSSGGGGGGGGRGRGEQHRGGAARPSEEGPVVSSGPLVGGTEKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDGDGGEDDDDSASEEDDTEDEDDGGGGRGGGKFSGVGVSRGGFVSPSPPSTREKDKGRPGSRTGGGLTTISTGLAGIAGGVRGSGRKSPKALPPAGSRVPSPFSPMAASPGANSGLSPSPNPMMAYQGLFNKAQMGALVGTGGQANSHAGTRNFSSLPGFPALNAFAPHGPFGSQTPAHSPPFSNLTSIPAQSPPNFPFFDFNAAAAAAAAAAAGGFPGFPMGAPAGPSPFSPLNAYQMALFQQQHQQQLQAAHMAMSMQQQQQQQQQQQQQQQQQQQQQQQQQHAPAPVPPSRRRASPSAQAKRQQQQEQDLKIPLSSATHPLEGRKDRQNGSGEKRDGSSPSSLGQALTPQADKAGVGEAGNIQKPSSGSASSTPPTGHSAFQSTYPGSASSSTGGSHAGSAEKKGAKTTGDETDVLAALVSLGSHPRSSSSASSSPKASEGGDGSSSSSRVSDSGSVGGEEGPAGGFGGGDKAGVRASEVEAGARDEGGREKEEGEAGMEGRRREEEESGKTAAEIATGGEVGKEGGAQERAQEDAGPLSALLGSRREGEKDVGEETCGQEEVGAGAGGGEEWKRKATSEEMEGSGCGKKLRVGEDDKQGQESVILGMAMGAKKPLAEEEKEGEAGERVPAKERGQ Sbjct: 1 MDHSTAVPASSITSTTNFGGSTGNSVASANTSTIIKTGKPSIMAPGFPSPPFSLPGASLYGMGFPPPAHSGNATHLPQNLFAPPPGVGGGVMDPFHPQGGPQQHLHNLHRPGGDMLAAGHSSGGGGGGGGRGRGEQHRGGAARPSEEGPVVSSGPLVGGTEKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDGDGGEDDDDSASEEDDTEDEDDGGGGRGGGKFSGVGVSRGGFVSPSPPSTREKDKGRPGSRTGGGLTTISTGLAGIAGGVRGSGRKSPKALPPAGSRVPSPFSPMAASPGANSGLSPSPNPMMAYQGLFNKAQMGALVGTGGQANSHAGTRNFSSLPGFPALNAFAPHGPFGSQTPAHSPPFSNLTSIPAQSPPNFPFFDFNAAAAAAAAAAAGGFPGFPMGAPAGPSPFSPLNAYQMALFQQQHQQQLQAAHMAMSMQQQQQQQQQQQQQQQQQQQQQQQQQHAPAPVPPSRRRASPSAQAKRQQQQEQDLKIPLSSATHPLEGRKDRQNGSGEKRDGSSPSSLGQALTPQADKAGVGEAGNIQKPSSGSASSTPPTGHSAFQSTYPGSASSSTGGSHAGSAEKKGAKTTGDETDVLAALVSLGSHPRSSSSASSSPKASEGGDGSSSSSRVSDSGSVGGEEGPAGGFGGGDKAGVRASEVEAGARDEGGREKEEGEAGMEGRRREEEESGKTAAEIATGGEVGKEGGAQERAQEDAGPLSALLGSRREGEKDVGEETCGQEEVGAGAGGGEEWKRKATSEEMEGSGCGKKLRVGEDDKQGQESVILGMAMGAKKPLAEEEKEGEAGERVPAKERGQ 911
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|299115109|emb|CBN75476.1| (putative c-myb-like transcription factor [Ectocarpus siliculosus]) HSP 1 Score: 175.637 bits (444), Expect = 2.633e-42 Identity = 87/155 (56.13%), Postives = 101/155 (65.16%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKF----EGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDGDGGEDDDDSASEE--DDTEDEDDGGGGRGGGKFSGVG 309 +++R VRKW QED + LV E G K WG+I ++ E RTGKQCRERWHNQLDP IKKD WTK EED L++AH+ GN+WAEIAK+LPGRTDNAIKN WNSAKRRLSRQ D S S D+ E D GGG + G G Sbjct: 18 KRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGEDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVSSVLDRRRSVSSSGGDEEEPHPDRGGGPAASEGCGAG 172
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|1214700878|gb|OWZ13371.1| (Myb-like DNA-binding protein [Phytophthora megakarya]) HSP 1 Score: 165.236 bits (417), Expect = 8.702e-41 Identity = 84/164 (51.22%), Postives = 106/164 (64.63%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDGDGGEDDDDSASEEDDTED--EDDGGGGRGGGKFSGVGVSRGGFVSPSPPS 322 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT DEE LL + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R + P + D S SE + D E G G + + + F S P S Sbjct: 23 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTSDEEQLLKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGNRPTASQRKCRDSSGSESSFSGDLPEIPSPGSLGINPLNPLLTDQLDFTSLYPTS 186
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|570990459|gb|ETP48411.1| (hypothetical protein F442_05841 [Phytophthora parasitica P10297]) HSP 1 Score: 162.54 bits (410), Expect = 1.074e-40 Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT DEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|568053489|gb|ETM50316.1| (hypothetical protein L914_05605 [Phytophthora parasitica]) HSP 1 Score: 162.54 bits (410), Expect = 1.106e-40 Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT DEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|566027727|gb|ETI50638.1| (hypothetical protein F443_05796 [Phytophthora parasitica P1569]) HSP 1 Score: 162.155 bits (409), Expect = 1.394e-40 Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT DEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|970651509|gb|KUF90316.1| (Myb-related protein B [Phytophthora nicotianae]) HSP 1 Score: 162.155 bits (409), Expect = 1.412e-40 Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT DEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 23 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 130
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|675188847|ref|XP_008903308.1| (hypothetical protein PPTG_10384 [Phytophthora parasitica INRA-310] >gi|568023098|gb|ETL97162.1| hypothetical protein L917_05487 [Phytophthora parasitica] >gi|568096770|gb|ETN11517.1| hypothetical protein PPTG_10384 [Phytophthora parasitica INRA-310]) HSP 1 Score: 162.155 bits (409), Expect = 1.421e-40 Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT DEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|301123585|ref|XP_002909519.1| (myb-like DNA-binding protein, putative [Phytophthora infestans T30-4] >gi|262100281|gb|EEY58333.1| myb-like DNA-binding protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 162.155 bits (409), Expect = 1.440e-40 Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268 ++R+ V KW +ED L+ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT +EE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 27 KERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPEEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 134
BLAST of EWM22086.1 vs. NCBI_GenBank
Match: gi|567965126|gb|ETK90599.1| (hypothetical protein L915_05663 [Phytophthora parasitica] >gi|567993842|gb|ETL44010.1| hypothetical protein L916_05601 [Phytophthora parasitica] >gi|570331513|gb|ETO79461.1| hypothetical protein F444_05844 [Phytophthora parasitica P1976] >gi|570955226|gb|ETP20412.1| hypothetical protein F441_05801 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 162.155 bits (409), Expect = 1.691e-40 Identity = 70/108 (64.81%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 161 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 268 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+K+ WT DEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131 The following BLAST results are available for this feature:
BLAST of EWM22086.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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