EWM22077.1, cds8571 (CDS) Nannochloropsis gaditana

Overview
NameEWM22077.1
Unique Namecds8571
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:371764..372101 +
Alignment locationKK037249.1:372230..372533 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22077.1
ProductBasic-leucine zipper domain protein
Orig transcript idgnl|cribi|Naga_100039g39.4415.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:371764..372101 +
KK037249.1supercontigKK037249.1:372230..372533 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
Homology
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BLAST of EWM22077.1 vs. NCBI_GenBank
Match: gi|585102494|gb|EWM22077.1| (Basic-leucine zipper domain protein [Nannochloropsis gaditana])

HSP 1 Score: 422.55 bits (1085), Expect = 1.945e-149
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 
Query:    1 MPVFHYPADSQTNGTAISYIPVSSQSHPQESGGPSSSPTRQPRGHATDPDCNDLDHEALPTKMDEDEDEDEEEEEEEGWEDEESKRQKRLEQNRKAAHESRQRKKIKYQQLSEALEALRAESLQLSQQSQSMREQLAATRPTRHSQERARLEEENQRLRQALLLALQGLAEDEEEEPIEEEREGGQGEGHSALREEEESKEGNTSVTRAPMLE 213
            MPVFHYPADSQTNGTAISYIPVSSQSHPQESGGPSSSPTRQPRGHATDPDCNDLDHEALPTKMDEDEDEDEEEEEEEGWEDEESKRQKRLEQNRKAAHESRQRKKIKYQQLSEALEALRAESLQLSQQSQSMREQLAATRPTRHSQERARLEEENQRLRQALLLALQGLAEDEEEEPIEEEREGGQGEGHSALREEEESKEGNTSVTRAPMLE
Sbjct:    1 MPVFHYPADSQTNGTAISYIPVSSQSHPQESGGPSSSPTRQPRGHATDPDCNDLDHEALPTKMDEDEDEDEEEEEEEGWEDEESKRQKRLEQNRKAAHESRQRKKIKYQQLSEALEALRAESLQLSQQSQSMREQLAATRPTRHSQERARLEEENQRLRQALLLALQGLAEDEEEEPIEEEREGGQGEGHSALREEEESKEGNTSVTRAPMLE 213
The following BLAST results are available for this feature:
BLAST of EWM22077.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102494|gb|EWM22077.1|1.945e-149100.00Basic-leucine zipper domain protein [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8598rna8598Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications