EWM29841.1, cds857 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|585112422|gb|EWM29841.1| (Protein of unknown function DUF1517 [Nannochloropsis gaditana]) HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0 Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0
Query: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL
Sbjct: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|585112423|gb|EWM29842.1| (Protein of unknown function DUF1517 [Nannochloropsis gaditana]) HSP 1 Score: 831.247 bits (2146), Expect = 0.000e+0 Identity = 413/417 (99.04%), Postives = 413/417 (99.04%), Query Frame = 0
Query: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPK----DGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPK DGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL
Sbjct: 1 MCPSSERKGLSTMTVFRPCSRRRTSRARPIIVFVMTAAACCSTLQYTSGLRVFTPQLSRIRGRRSDGTFTFCMDDENLPERRVIHPKANLPAVLGGLSLPFLSQSAQALAAPGAGRIAGRATDIPPPPPPSNSRIERSVTPSSSSDSRFSFEFGRAIPKIRIQDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 417
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|553195590|ref|XP_005856177.1| (membrane protein [Nannochloropsis gaditana CCMP526] >gi|422292880|gb|EKU20181.1| membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 491.886 bits (1265), Expect = 7.363e-173 Identity = 243/244 (99.59%), Postives = 244/244 (100.00%), Query Frame = 0
Query: 170 LVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
+VHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL
Sbjct: 1 MVHGRPIRKTDVAVFGGFMGVAIAQAEMARRRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 244
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|656720236|gb|KEF42941.1| (hypothetical protein ER33_03485 [Cyanobium sp. CACIAM 14]) HSP 1 Score: 87.8113 bits (216), Expect = 1.139e-15 Identity = 69/204 (33.82%), Postives = 102/204 (50.00%), Query Frame = 0
Query: 210 EGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
+G V + Q+ L R L L+RLA A+T+TS+GL + SL LLR + WV A G+ +AE FN SM+ER K E T +A RR + + AS A +V+TL+VA RN + + +G+AE L SL++ A ++LA++V W P+G GE+LS + +P+L L
Sbjct: 129 DGPVSIAQIQVGLL-ASARDLQDDLRRLAASADTSTSSGLQRVLQETSLSLLRHPDLWVYANGEVGQVP-FTSAESTFNRLSMQERSKLERELTAN------VAGRRFSAPAAVAPGASD-AASDFIVVTLLVASRN----RLAIKGAGTAEDLRESLQKLGAV----GADDLLALEVIWQPEGAGEVLSTEQLITAYPDLQHL 315
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|949108659|gb|KRO93606.1| (hypothetical protein ABR96_08565 [cyanobacterium BACL30 MAG-120619-bin27]) HSP 1 Score: 85.5001 bits (210), Expect = 7.619e-15 Identity = 69/214 (32.24%), Postives = 109/214 (50.93%), Query Frame = 0
Query: 200 RRERLGQGGVEGDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
R + +G G +G V + Q+ L R L L+RLA A+T+ +AGL +L +L LLR + WV A + G+ A+AE FN SM ER K E T + +R ++S +A S A + +TL+VA R+ + + SGSA+ + SL++ A ++LA++V W P+G GE+LS ++ +P+L L
Sbjct: 128 RSDLVGGGRPDGPVTISQLQVGLL-ASARQLQTDLRRLAGSADTSHAAGLQALLQETTLALLRHPDLWVYANSEVGQVP-FASAESTFNRLSMTERSKLQREVTTN------VGGKRFSDDSV--AAGDSDASSDFIAVTLLVASRS----RLALKGSGSADQVRDSLQQLGAV----GAADLLAIEVIWQPEGAGEVLSTEELLTAYPQLQHL 323
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|1200347588|gb|OUU67506.1| (hypothetical protein CBC26_06095 [Synechococcus sp. TMED66]) HSP 1 Score: 85.1149 bits (209), Expect = 8.334e-15 Identity = 65/203 (32.02%), Postives = 103/203 (50.74%), Query Frame = 0
Query: 211 GDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
G V L+ QI L + L L++LA A+T+TS+GL + +L LLR E WV A SG A+E FN SM ER K E T + R GN ++ SS+ + A + +V+T++VA R + + +++ S EAL +L + + +++A++V W PDG G++LS ++ +P L L
Sbjct: 139 GPVSLLQMQIGLL-ASAKSLQTDLRQLAASADTSTSSGLQRVLQETTLALLRQPELWVYANVESGSVP-FNASESTFNRLSMTERSKLRAEITTN------VGGVRNGNTAELSSSGDADATNEFIVVTVLVASR----QSVKLKQADSGEALRETLRILGST----SSSDLMALEVIWQPDGSGDVLSADELVMAYPNLQHL 325
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|351675446|gb|EHA58607.1| (hypothetical protein Syn8016DRAFT_2923 [Synechococcus sp. WH 8016]) HSP 1 Score: 83.5741 bits (205), Expect = 2.342e-14 Identity = 63/203 (31.03%), Postives = 102/203 (50.25%), Query Frame = 0
Query: 211 GDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
G V ++ QI L + L L++LA A+T+TS+GL + +L LLR E WV A SG A+E FN SM ER K E T + R GN ++ SS+ + A + +V+T++VA R + + +++ S E L +L + + +++A++V W PDG G++LS ++ +P L L
Sbjct: 114 GPVSMLQMQIGLL-ASAKALQTDLRQLAASADTSTSSGLQRVLQETTLALLRQPELWVYANVESGSVP-FNASESTFNRLSMTERSKLRAEITTN------VGGVRNGNAAELSSSGDADATNEFIVVTVLVASR----QSVKLKQANSGEDLRETLRILGS----TSSSDLMALEVIWQPDGSGDVLSADELVMAYPNLQHL 300
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|1137233961|gb|OMO96457.1| (hypothetical protein COLO4_15279 [Corchorus olitorius]) HSP 1 Score: 84.3445 bits (207), Expect = 3.423e-14 Identity = 60/183 (32.79%), Postives = 99/183 (54.10%), Query Frame = 0
Query: 228 RGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPEL 410
R L + L R+AE A+T+TS GL+ + + ++ LLR E ++A ++ M E+ FN+ S+ ER K+ E+ V RRK S++ S S+ + LV+T++VA G+H LP +GS + L+ +L++ A+ K LAV+V WTP + + LS ++ +PEL
Sbjct: 238 RSLQRELNRIAEDADTSTSKGLSYVLTETAVALLRHPEYCISAYSSVNVKYSMDGGEKHFNQLSIEERAKF-----DEETLVNVDNVRRKNKASQKPSGFSN----EYLVVTILVAAE---GEHKLPPINGSKD-LKEALQKLASITTSK----TLAVEVLWTPQDENDTLSEKELLEDYPEL 403
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|740172171|ref|WP_038015021.1| (DUF1517 domain-containing protein [Synechococcus sp. WH 8016]) HSP 1 Score: 82.8037 bits (203), Expect = 4.907e-14 Identity = 63/203 (31.03%), Postives = 102/203 (50.25%), Query Frame = 0
Query: 211 GDVYLVTYQIALYDRDQRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGWVAAQATSGRFKDMAAAERAFNEASMRERKKWAFENTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGKHILPRRSGSAEALEGSLERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPELIDL 413
G V ++ QI L + L L++LA A+T+TS+GL + +L LLR E WV A SG A+E FN SM ER K E T + R GN ++ SS+ + A + +V+T++VA R + + +++ S E L +L + + +++A++V W PDG G++LS ++ +P L L
Sbjct: 135 GPVSMLQMQIGLL-ASAKALQTDLRQLAASADTSTSSGLQRVLQETTLALLRQPELWVYANVESGSVP-FNASESTFNRLSMTERSKLRAEITTN------VGGVRNGNAAELSSSGDADATNEFIVVTVLVASR----QSVKLKQANSGEDLRETLRILGST----SSSDLMALEVIWQPDGSGDVLSADELVMAYPNLQHL 321
BLAST of EWM29841.1 vs. NCBI_GenBank
Match: gi|298706488|emb|CBJ29475.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 84.3445 bits (207), Expect = 6.090e-14 Identity = 94/310 (30.32%), Postives = 124/310 (40.00%), Query Frame = 0
Query: 158 PKDGDLLSNDRVLVHGRPIRKTDVAVFGGFMGVAIAQAEMARRR----------------ERLGQGGVEGDVYLVTYQIALY-DRD--QRGLMQALQRLAERAETTTSAGLASLASSVSLELLRSYEGW------VAAQATSGRFKD-------MAAAERAFNEASMRERKKWAFE---NTPEDRAAMVLAARRKGNESKESSAASSMAGKQLLVLTLMVACRNIGGK--HILPRRSG----------SAEALEGS----------LERFAAALLEKNGKNVLAVDVSWTPDGDGEILSRLDVTRKWPEL 410
P DGD S I DVA+ GG A R+R R G+GG + T Q+ LY DR Q ++ L +L++ A+ + GL++L + V L LLRS W V A+ GR ++ A+R FN A+MRER KW E NTP DR A G S + S ++A TL+VA + PRR G +E S LE E G+NVL V+V WTP + L R D+ KWPEL
Sbjct: 243 PYDGDAPSTS--------ITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGSGQRPSAPLPPRSGRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTP-DRGFSSSTAPSWGGFSAQKSGTYAVA-------TLIVAWSGLNSTPPRAEPRRGGWFTRDSRDRDDDRGVEFSVVNRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPEL 536 The following BLAST results are available for this feature:
BLAST of EWM29841.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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