EWM22128.1, cds8562 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|585102548|gb|EWM22128.1| (transmembrane 9 superfamily member 3 [Nannochloropsis gaditana]) HSP 1 Score: 1239.56 bits (3206), Expect = 0.000e+0 Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0
Query: 1 MMAACRRVVAFALLVSAGLVHRVAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQSIYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
MMAACRRVVAFALLVSAGLVHRVAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQSIYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID
Sbjct: 1 MMAACRRVVAFALLVSAGLVHRVAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQSIYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|168066231|ref|XP_001785045.1| (predicted protein [Physcomitrella patens] >gi|162663394|gb|EDQ50160.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 301/584 (51.54%), Postives = 392/584 (67.12%), Query Frame = 0
Query: 22 RVAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGE--ADETGAQ--SIYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
++ A E +H+Y +GD V LWVNKVGPY+NP ETY YY LPFC P R + LGE LEG+EL++S + F V K +CS L F SAV YW++ ++DDLP+WG VGE AD+ + +IYTH+ L + YN +I+VN+T +NL + G +D TY V W+ + +F RFD YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+E+ E +SEESGWK VHGDVFRAP +L+ SAL G G Q L+L+V+ AI G L Y RG +VT+ IV YALT +AGY SG +Y + W K+MLLT LFP L + F LN +A YY + A+ T+ +F IW F+S PL + GT+ GR+W+G+ D PCR+ ++ RPIP WY P+++A + G+LPFGSIFIEMYF+FTSFW YK YYVY F+LLV++IL +V++C TIV YFLLN ENYHWQW SF+++ STAGYV+LYS+YYF +KT+M+G Q +FYFGYT +FC GL + CGA+G +G S+FVRRIY +K D
Sbjct: 20 QLCSANEYDHRYGKGDPVMLWVNKVGPYNNPQETYNYYSLPFCSPGAAGNARHKWGGLGEVLEGNELIDSEVEIKFKTPVEKRTICSFTLDGTSVAAFRSAVAQAYWFEFFMDDLPLWGFVGEQHADKNDDEKYTIYTHKDLLIKYNNDQIIQVNLTQDNLQPLISGKKIDLTYAVQWVETNISFIRRFDAYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAREE--DDLETLERDVSEESGWKLVHGDVFRAPRNLVLLSALVGTGAQLAMLMLLVILLAIVGML----YVGRGAIVTTFIVCYALTSFIAGYVSGGFYSR-------NDGKHWIKSMLLTASLFPFLCFGIGFLLNFVAIYYHSLAAIPFGTMVVVFVIWAFISFPLALFGTVVGRNWSGQPDNPCRVKTIPRPIPEKKWYLKPSVVALLGGLLPFGSIFIEMYFVFTSFWQYKVYYVYGFMLLVFIILTIVTVCVTIVGTYFLLNAENYHWQWTSFLSAASTAGYVYLYSVYYFYMKTKMSGFFQISFYFGYTLMFCLGLGIFCGAVGYLGSSMFVRRIYRNIKCD 590
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|545361361|ref|XP_005645983.1| (hypothetical protein COCSUDRAFT_53991 [Coccomyxa subellipsoidea C-169] >gi|384247954|gb|EIE21439.1| hypothetical protein COCSUDRAFT_53991 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0 Identity = 305/582 (52.41%), Postives = 380/582 (65.29%), Query Frame = 0
Query: 24 AEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS----IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
+ A E HKY G++V LWVNKVGPY+NP ETY YY LPFCKP + + + LGE L+G+EL++S + F +V K +CS +LS +A TF AV YWY+L++DDLP+WG VG E IYTH+ + YN +I+VN+TSEN I G N++FTY V W PS F RF+RYLD +FF HQIHW SIFNS MMV+FL GLVS+IL RTLR D+ARY D E + EESGWK VHGDVFR P +L +AL G G Q LVL V+ IAG L + ERG +VT IV YALT VAGY SG +Y + W TMLLT LFP+L ++ LN IA Y + A+ +I + IW+F+S PL + GT+ GR+W G D PCR+ + PIP WY P +IA + G+LPFGSIFIEMYFIFTSFWNYK YYVY F+LLV+LIL ++++C TIV YFLLN ENYHWQW SF A+ STA YVFLY+++YF VKT+MTG QT FYFGYT +FC GL ++ GALG +G ++FVRRIY +K D
Sbjct: 41 SAANESTHKYNVGEQVRLWVNKVGPYNNPQETYNYYYLPFCKPKQADKAVHKWGGLGEVLQGNELIDSQLDMKFRTEVPKKTICSQRLSEPNAVTFRKAVQKHYWYELFIDDLPVWGFVGPPPEEIKDEEHIYIYTHKSFDINYNDNRIIQVNLTSENPQPIVPGMNVEFTYSVRWAPSAIPFPRRFERYLDYNFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRADYARYTARD-DDDLEALERDVGEESGWKLVHGDVFRPPRYLELLAALVGTGVQLALLVLSVILITIAGTL----FTERGTIVTVFIVCYALTSFVAGYVSGGFYAR-------NAGKTWIPTMLLTANLFPLLCFSIASVLNTIAIAYHSLAAVPFGSIVVVLLIWMFLSFPLCLFGTVVGRNWNGLPDNPCRVKRIPSPIPARQWYLRPTVIALMGGLLPFGSIFIEMYFIFTSFWNYKVYYVYGFMLLVFLILAIMTVCVTIVGTYFLLNAENYHWQWTSFCAAASTALYVFLYAVHYFFVKTKMTGFFQTCFYFGYTLMFCLGLSIMTGALGYLGSAIFVRRIYRNIKCD 610
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|326503624|dbj|BAJ86318.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0 Identity = 302/581 (51.98%), Postives = 400/581 (68.85%), Query Frame = 0
Query: 23 VAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS--IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
+A A E +HKY + V LWVNKVGPY+NP ETY YY LPFC+P E + LGE L G+EL++S + F K+V K VC+++L A+ + F A+++ YW++L++DDLP+WG VGE D+ +YTH+ + + YNG VI VN+T E+ +E G LD TY V W+ + AFA RF+ YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+ED E +SEESGWK VHGDVFR P +LMF SA+ GIG Q AL+L+V+ AI G L Y RG ++T+ IV YALT ++GY SG Y + W K+M+LT LFP L ++ LN IA +Y + A+ T+ IF +W F+S PL ++GT+ GR+W+G + PCR+ ++ RPIP WY P++I+ + G+LPFGSIFIEMYF+FTSFWNYK YYVY F+LLV++IL++V++C TIV YFLLN ENYHWQW SF ++ STA YV+LY+IYY+ VKT+M+G QT+FYFGYT +FC GL +LCGA+G +G +LFVRRIY +K D
Sbjct: 20 LASASESDHKYKISEPVKLWVNKVGPYNNPQETYNYYSLPFCQPAE--NPAHKWGGLGEVLGGNELIDSQIDIQFLKNVDKGPVCTIELDAKKVQQFTDAIESSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNIVVKYNGNRVIHVNLTQESPKLLEAGRKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARED--DDLESLERDVSEESGWKLVHGDVFRPPCNLMFLSAVVGIGTQMAALILLVIVLAIVGML----YVGRGAIITTFIVCYALTSFISGYVSGGLYSR-------NGGKNWIKSMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMVVIFVLWAFISFPLVLLGTVVGRYWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILLIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYAIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYLGSTLFVRRIYRNIKCD 585
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|1149792885|ref|XP_020157765.1| (transmembrane 9 superfamily member 1 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0 Identity = 301/581 (51.81%), Postives = 400/581 (68.85%), Query Frame = 0
Query: 23 VAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS--IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
+A A E +HKY + V LWVNKVGPY+NP ETY YY LPFC+P E + LGE L G+EL++S + F K+V K +C+++L A+ + F A+++ YW++L++DDLP+WG VGE D+ +YTH+ + + YNG VI VN+T E+ +E G LD TY V W+ + AFA RF+ YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+ED E +SEESGWK VHGDVFR P +LMF SA+ GIG Q AL+L+V+ AI G L Y RG ++T+ IV YALT ++GY SG Y + W K+M+LT LFP L ++ LN IA +Y + A+ T+ IF +W F+S PL ++GT+ GR+W+G + PCR+ ++ RPIP WY P++I+ + G+LPFGSIFIEMYF+FTSFWNYK YYVY F+LLV++IL++V++C TIV YFLLN ENYHWQW SF ++ STA YV+LY+IYY+ VKT+M+G QT+FYFGYT +FC GL +LCGA+G +G +LFVRRIY +K D
Sbjct: 20 LASASESDHKYKISEPVKLWVNKVGPYNNPQETYNYYSLPFCQPAE--NPAHKWGGLGEVLGGNELIDSQIDIQFLKNVDKGPICTIELDAKKVQQFTDAIESSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNIVVKYNGNRVIHVNLTQESPKLLEAGRKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARED--DDLESLERDVSEESGWKLVHGDVFRPPRNLMFLSAVVGIGTQMAALILLVIVLAIVGML----YVGRGAIITTFIVCYALTSFISGYVSGGLYSR-------NGGKNWIKSMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMVVIFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILLIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYAIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYLGSTLFVRRIYRNIKCD 585
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|326516862|dbj|BAJ96423.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0 Identity = 302/581 (51.98%), Postives = 400/581 (68.85%), Query Frame = 0
Query: 23 VAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS--IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
+A A E +HKY + V LWVNKVGPY+NP ETY YY LPFC+P E + LGE L G+EL++S + F K+V K VC+++L A+ + F A+++ YW++L++DDLP+WG VGE D+ +YTH+ + + YNG VI VN+T E+ +E G LD TY V W+ + AFA RF+ YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+ED E +SEESGWK VHGDVFR P +LMF SA+ GIG Q AL+L+V+ AI G L Y RG ++T+ IV YALT ++GY SG Y + W K+M+LT LFP L ++ LN IA +Y + A+ T+ IF +W F+S PL ++GT+ GR+W+G + PCR+ ++ RPIP WY P++I+ + G+LPFGSIFIEMYF+FTSFWNYK YYVY F+LLV++IL++V++C TIV YFLLN ENYHWQW SF ++ STA YV+LY+IYY+ VKT+M+G QT+FYFGYT +FC GL +LCGA+G +G +LFVRRIY +K D
Sbjct: 20 LASASESDHKYKISEPVKLWVNKVGPYNNPQETYNYYSLPFCQPAE--NPAHKWGGLGEVLGGNELIDSQIDIQFLKNVDKGPVCTIELDAKKVQQFTDAIESSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNIVVKYNGNRVIHVNLTQESPKLLEAGRKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARED--DDLESLERDVSEESGWKLVHGDVFRPPCNLMFLSAVVGIGTQMAALILLVIVLAIVGML----YVGRGAIITTFIVCYALTSFISGYVSGGLYSR-------NGGKNWIKSMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMVVIFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILLIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYAIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYLGSTLFVRRIYRNIKCD 585
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|357157370|ref|XP_003577775.1| (PREDICTED: transmembrane 9 superfamily member 1 [Brachypodium distachyon] >gi|944053540|gb|KQJ89178.1| hypothetical protein BRADI_4g23990 [Brachypodium distachyon]) HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0 Identity = 300/581 (51.64%), Postives = 397/581 (68.33%), Query Frame = 0
Query: 23 VAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS--IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
+A A E +HKY + V LWVNKVGPY+NP ETY YY LPFC P E + LGE L G+EL++S + F K V K +C+++L A+ + F A+++ YW++L++DDLP+WG VGE D+ +YTH+ + + YNG +I VN+T E+ +E G LD TY V W+ + AFA RF+ YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+ED E +SEESGWK VHGDVFR P LMF SA+ GIG Q AL+++V+ AI G L Y RG ++T+ IV YALT ++GY SG Y + W K+M+LT LFP L ++ LN IA +Y + A+ T+ IF +W F+S PL ++GT+ GR+W+G + PCR+ ++ RPIP WY P++I+ + G+LPFGSIFIEMYF+FTSFWNYK YYVY F+LLV++IL++V+IC TIV YFLLN ENYHWQW SF ++ STA YV+LY+IYY+ VKT+M+G QT+FYFGYT +FC GL +LCGA+G +G +LFVRRIY +K D
Sbjct: 20 LASASESDHKYKVDESVKLWVNKVGPYNNPQETYNYYSLPFCLPSE--NPAHKWGGLGEVLGGNELIDSQIDIKFLKHVEKGPICTIELDAKKVQQFTDAIESSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNVVVKYNGNRIIHVNLTQESPKLLEAGKKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARED--DDLESLERDVSEESGWKLVHGDVFRPPRSLMFLSAVVGIGTQLAALIMLVIVLAIVGML----YVGRGAIITTFIVCYALTSFISGYVSGGLYSR-------NGGKNWIKSMILTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMVVIFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILLIVTICVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYAIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYLGSTLFVRRIYRNIKCD 585
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|242067661|ref|XP_002449107.1| (transmembrane 9 superfamily member 1 [Sorghum bicolor] >gi|241934950|gb|EES08095.1| hypothetical protein SORBI_3005G062200 [Sorghum bicolor]) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 302/581 (51.98%), Postives = 399/581 (68.67%), Query Frame = 0
Query: 23 VAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS--IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
+A A E +HKY + V LWVNKVGPY+NP ETY YY LPFC+P E + LGE L G+EL++S + F K+V K +C+++L A+ + FA+A++N YW++L++DDLP+WG VGE D+ +YTH+ + + YNG +I VN+T E+ + G LD TY V W+ + AFA RF+ YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+ED E +SEESGWK VHGDVFR P L+F SAL GIG Q AL+L+V+ AI G L Y RG ++T+ IV YALT ++GY SG Y + W K M+LT LFP L ++ LN IA +Y + A+ T+ +F +W F+S PL ++GT+ GR+W+G + PCR+ ++ RPIP WY P++I+ + G+LPFGSIFIEMYF+FTSFWNYK YYVY F+LLV++IL++V+IC TIV YFLLN ENYHWQW SF ++ STA YV+LYSIYY+ VKT+M+G QT+FYFGYT +FC GL +LCGA+G +G +LFVRRIY +K D
Sbjct: 25 LAYASEADHKYKTEEPVKLWVNKVGPYNNPQETYNYYSLPFCQPSE--NPSHKWGGLGEVLGGNELIDSQIDIKFIKNVDKGAICTIELDAQKVEQFANAIENSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNIVVKYNGNRIIHVNLTQESPKLLVAGKKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARED--DDLESLERDVSEESGWKLVHGDVFRPPRSLVFLSALVGIGTQLAALILLVIVLAIVGML----YVGRGAIITTFIVCYALTSFISGYVSGGLYSR-------NGGKTWIKAMVLTASLFPFLCFSIGLVLNTIAIFYRSLAAIPFGTMVVMFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILIIVTICVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 590
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|1002872799|ref|XP_006662781.2| (PREDICTED: transmembrane 9 superfamily member 1 [Oryza brachyantha]) HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0 Identity = 299/581 (51.46%), Postives = 397/581 (68.33%), Query Frame = 0
Query: 23 VAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS--IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
+A A E +HKY + V LWVNKVGPY+NP ETY YY LPFC+P E + LGE L G+EL++S + F K+V K +C+++L + + F A+++ YW++L++DDLP+WG VGE D+ +YTH+ + + YNG +I VN+T E+ +E G LD TY V W+ + AFA RF+ YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+ED E +SEESGWK VHGDVFR P L+F SA GIG Q AL+L+V+ AI G L Y RG ++T+ IV YALT ++GY SG Y + W K+M+LT LFP L ++ LN IA +Y + A+ T+ IF +W F+S PL ++GT+ GR+W+G + PCR+ ++ RPIP WY P++I+ + G+LPFGSIFIEMYF+FTSFWNYK YYVY F+LLV++IL++V+IC TIV YFLLN ENYHWQW SF ++ STA YV+LYSIYY+ +KT+M+G QT+FYFGYT +FC GL +LCGA+G +G +LFVRRIY +K D
Sbjct: 25 LASASESDHKYKAEEAVKLWVNKVGPYNNPQETYNYYSLPFCQPSE--NPVHKWGGLGEVLGGNELIDSQIDIKFLKNVEKGPICTIELDDKKVQQFTDAIESSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNIVVKYNGNRIIHVNLTQESPKLLEAGKKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARED--DDLESLERDVSEESGWKLVHGDVFRPPRSLVFLSAFVGIGSQLAALILLVIVLAIVGML----YVGRGAIITTFIVCYALTSFISGYVSGGLYSR-------NGGKNWIKSMILTASLFPFLCFSIGLVLNTIAIFYRSLAAIPFGTMVVIFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILIIVTICVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYSIYYYHMKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 590
BLAST of EWM22128.1 vs. NCBI_GenBank
Match: gi|195615914|gb|ACG29787.1| (transmembrane 9 superfamily protein member 3 precursor [Zea mays]) HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0 Identity = 303/598 (50.67%), Postives = 404/598 (67.56%), Query Frame = 0
Query: 6 RRVVAFALLVSAGLVHRVAEAGERNHKYAEGDEVTLWVNKVGPYHNPHETYEYYDLPFCKPVEGVETRRRSNSLGEQLEGHELMNSGYLLSFTKDVAKTKVCSMKLSAEDAKTFASAVDNRYWYQLYLDDLPIWGMVGEADETGAQS--IYTHRKLSLGYNGPNVIEVNMTSENLVRIEEGANLDFTYEVTWIPSTTAFANRFDRYLDVDFFGHQIHWLSIFNSTMMVVFLCGLVSLILFRTLRNDFARYAKEDLGGHATGSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQWQKTMLLTVFLFPVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
R V+ A ++ A +A A E HKY + V LWVNKVGPY+NP ETY YY LPFC+P E + LGE L G+EL++S + F K+V K +C+++L + + FA+A++N YW++L++DDLP+WG VGE D+ + +YTH+ + + YNG +I VN+T E+ +E G LD TY V W+ + AFA RF+ YLD FF HQIHW SIFNS MMV+FL GLVS+IL RTLRND+A+YA+ED E ++EESGWK VHGDVFR P +F SAL GIG Q AL+L+V+ AI L Y RG ++T+ IV YALT ++GY SG Y + W K M+LT LFP L ++ LN IA +Y + A+ T+ +F +W F+S PL ++GT+ GR+W+G + PCR+ ++ RPIP WY P++I+ + G+LPFGSIFIEMYF+FTSFWNYK YYVY F+LLV++IL++V+IC TIV YFLLN ENYHWQW SF ++ STA YV+LYSIYY+ VKT+M+G QT+FYFGYT +FC GL +LCGA+G +G +LFVRRIY +K D
Sbjct: 4 RSVLLLAAILIAVAHSPLAYASEAEHKYKTEEPVKLWVNKVGPYNNPQETYNYYSLPFCQPSE--NPAHKWGGLGEVLGGNELIDSQIDIKFIKNVDKGAICTIELDVQKVQQFANAIENSYWFELFIDDLPLWGFVGETDKNNEKKHYLYTHKNIVVKYNGNRIIHVNLTQESPKLLEAGKKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYARED--DDLESLERDVNEESGWKLVHGDVFRPPRGQVFLSALVGIGTQLAALILLVIVLAIVVML----YVGRGAIITTFIVCYALTSFISGYVSGGLYSR-------NGGKNWIKAMILTASLFPFLCFSIGLLLNTIAIFYRSLAAIPFGTMVVMFILWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILIIVTICVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 586 The following BLAST results are available for this feature:
BLAST of EWM22128.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|