EWM22127.1, cds8540 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|585102547|gb|EWM22127.1| (hypothetical protein Naga_100060g28 [Nannochloropsis gaditana]) HSP 1 Score: 1111.67 bits (2874), Expect = 0.000e+0 Identity = 545/545 (100.00%), Postives = 545/545 (100.00%), Query Frame = 0
Query: 1 MHHRGAIRWHFLIYFLLLRTRSFVALLFFSLTSFWSGSAVIAFQSVSSRWPCLFFVRLNSYHGYSWQPRIPVVPLSPLFSSSSTSSSPPPVMTFKPPSLTEITVTPDLYDAVRIYAMSDLHVDYRKNLELFQYWCSRPASGNSLSSLALEQEKSDRIYSILLIPGDIASNPANFKAVLAATRRRFHATFIVAGNHDLWVSNSLADQGVVTSIDKLAWIHQVAEGNGDEPEGEEDTEDGVGGKEEEGGWSEEGKEGGPGVPGRRGESEGDWSGTPEPSANPGGSRAAHLPISPSSSSSRRGKVFTGPVRFHTPRGERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTIPTRWGAHYREAARNVLETELAPWVKKYWERK 545
MHHRGAIRWHFLIYFLLLRTRSFVALLFFSLTSFWSGSAVIAFQSVSSRWPCLFFVRLNSYHGYSWQPRIPVVPLSPLFSSSSTSSSPPPVMTFKPPSLTEITVTPDLYDAVRIYAMSDLHVDYRKNLELFQYWCSRPASGNSLSSLALEQEKSDRIYSILLIPGDIASNPANFKAVLAATRRRFHATFIVAGNHDLWVSNSLADQGVVTSIDKLAWIHQVAEGNGDEPEGEEDTEDGVGGKEEEGGWSEEGKEGGPGVPGRRGESEGDWSGTPEPSANPGGSRAAHLPISPSSSSSRRGKVFTGPVRFHTPRGERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTIPTRWGAHYREAARNVLETELAPWVKKYWERK
Sbjct: 1 MHHRGAIRWHFLIYFLLLRTRSFVALLFFSLTSFWSGSAVIAFQSVSSRWPCLFFVRLNSYHGYSWQPRIPVVPLSPLFSSSSTSSSPPPVMTFKPPSLTEITVTPDLYDAVRIYAMSDLHVDYRKNLELFQYWCSRPASGNSLSSLALEQEKSDRIYSILLIPGDIASNPANFKAVLAATRRRFHATFIVAGNHDLWVSNSLADQGVVTSIDKLAWIHQVAEGNGDEPEGEEDTEDGVGGKEEEGGWSEEGKEGGPGVPGRRGESEGDWSGTPEPSANPGGSRAAHLPISPSSSSSRRGKVFTGPVRFHTPRGERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTIPTRWGAHYREAARNVLETELAPWVKKYWERK 545
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|553192976|ref|XP_005855684.1| (hypothetical protein NGA_2065300, partial [Nannochloropsis gaditana CCMP526] >gi|422293376|gb|EKU20676.1| hypothetical protein NGA_2065300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 182.956 bits (463), Expect = 1.319e-52 Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 0
Query: 384 LAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIR 475
LAVWFARQNE F ADTRVRGEG PAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLR+QVEALRPDLHVFGHTHIPIDLTVQGIR
Sbjct: 1 LAVWFARQNEFFFADTRVRGEGSPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRRQVEALRPDLHVFGHTHIPIDLTVQGIR 92
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|873225767|emb|CEM23230.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 155.221 bits (391), Expect = 2.178e-38 Identity = 134/472 (28.39%), Postives = 189/472 (40.04%), Query Frame = 0
Query: 110 DAVRIYAMSDLHVDYRKNLELFQYWCSRPASGNSLSSLALEQEKSDRIYSILLIPGDIASNPANFKAVLAATRRRFHATFIVAGNHDLWVSNS--------------------------LADQGVVTSIDKLAWIHQVAEGNGDEPEGEEDTEDGVGGKEEEGGWSEEGKEGGPGVPGRRGESEGDWSGTPEPSANPGGSRAAHLPISPSSSSSRRGKVFTGPVRFHTPRGERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKT---------TVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQ--TYEMGRRGPVLVFDEERGGLVGTIPTRWGAHYREAARNVLETELAPWVKKYWER 544
+ +RI+A+SD+H DYR NLE Q LS A +++ +++ GD++ A + L +F GNHD+WV+ ++ S KL +I + + E G+ + W + E P P P S SS+ G ++ P+ LSWYH +DTEPD+P + P EQ DF C+WP D +S + LA +F + N D R+ G G ++ VISFSHFLPR +L PEKRFL P LPK +GS L ++V LRPD+HVFGHTH D + G R+LQ L E+ R+ + E+G L+ E G W +YR R+ TELAPWVK E+
Sbjct: 18 EIMRIFAISDVHTDYRANLEYVQ----------GLSQTAYKEDA-------VIVAGDVSDRLATLRTTLQLFTEKFG-----HGNHDVWVTRDEVFHSPSPSRNPTHTRSSGNGSSSGSSSNPKFADSAAKLQYIFTMCD------------EMGIVTTPKRLAWQRQWTENTPPAP----------------------------PPSDRSSNPSEGTIWVVPL---------------LSWYHTDFDTEPDIPNLPL-------PPVEQVITDFATCRWP--------DGLSAADGSRALAEYFDQMN-----DRRLNGSGKRNIRSWDDIDVSVEQVISFSHFLPRLDLLPEKRFLFYPNLPKAVGSDLLGQRVARLRPDMHVFGHTHFGWDTQINGTRFLQLALSYPYERQRRLGSIEVGPFPQRLMAIWEDGAFAPQQTAHWSLYYRTHKRDPSNTELAPWVKSRLEK 392
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|676384315|ref|XP_009035436.1| (hypothetical protein AURANDRAFT_53066 [Aureococcus anophagefferens] >gi|323453487|gb|EGB09358.1| hypothetical protein AURANDRAFT_53066 [Aureococcus anophagefferens]) HSP 1 Score: 155.992 bits (393), Expect = 1.059e-37 Identity = 92/243 (37.86%), Postives = 129/243 (53.09%), Query Frame = 0
Query: 302 VFTGPVRFHTPRGERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDRE-DFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTIPTRWGAHYREAARNVLETELAPWVKKYWE 543
+ TGP RF +G +L +PLLSWY ++D + + P A P RW D+ C W E + + F + +A FA +NE LA + + V++ SHF PR EL PEKRFL++P LPKV GS + Q+ L PD HVFGHTH+ DL + G+RY+ WPLGS E + QT + G +++FD + G T WG YR+ R+ T APWV+K ++
Sbjct: 245 IRTGPTRFVVAKGSDVLAVPLLSWYDDAFDGDGE-PGPGDAPPGLDSPQHRARWVDYAFCAWGEALERAPGFRFSAADGASDHVARHFAARNEPRLA-AALDDLQTSRSRPVVVTVSHFAPRRELLPEKRFLVDPHLPKVSGSELIEAQLRVLGPDAHVFGHTHLCYDLELDGVRYVNWPLGSAREMANQTRVVAGSGALVLFDGAKDGFAPRQWTFWGDWYRDRRRDPAITAPAPWVRKAYK 485
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|1129187089|gb|OLP93092.1| (ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Symbiodinium microadriaticum]) HSP 1 Score: 153.295 bits (386), Expect = 1.751e-35 Identity = 92/250 (36.80%), Postives = 132/250 (52.80%), Query Frame = 0
Query: 306 PVRFHTPRGERLLILPLLSWYHASWDTEPDL---PAEVVADLYEGRPTFEQRWADFRCCKWPE----EVLQDREDF-VSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTIP---TRWGAHYREAARNVLETELAPWVKKYWER 544
PV+F P +L++PLLS+Y + WD +P+L P E + + W DFR KWP+ EV++ DF ++ FA N+ L T VISFSH+LPR+EL PEKRFL++ L KV GS L +QV LRP+LH+FGH+H+ +D V+G RY+QW LG EQ + +G G ++VFD GG P T WG ++ + R+ +T P V+ + +
Sbjct: 3103 PVKFCLPNARDVLLVPLLSFYASCWDQDPELDWCPPEQKSMV---------GWMDFRLLKWPQLLVDEVVRREGDFKFGKDGTSTAISEIFAEMNQPLLEAIEAMKHESGDSDTVVISFSHYLPRQELFPEKRFLVDSTLAKVSGSVALERQVRRLRPELHIFGHSHLTVDNVVEGQRYVQWALGYANEQKGMSRAVGDTGILVVFDS--GGKPDVAPIQETFWGRYFAKGLRDTSQTCPHPMVRGMFAK 3341
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|298708277|emb|CBJ48340.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 147.132 bits (370), Expect = 6.058e-35 Identity = 70/139 (50.36%), Postives = 97/139 (69.78%), Query Frame = 0
Query: 409 EKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVF--DEERGGLVGTIPTRWGAHYREAARNVLETELAPWVKKYWERK 545
+ T +ISFSHF+PR+ELCPEKR L EP L KVIGS PL +Q+ L D+H+FGHTHIPID+T +G+RY+QWPLG++ EQS +T +M +GP+LV+ D GGL + T WG Y+ R+ +TE+ +Y ++
Sbjct: 321 DTTKIISFSHFVPRQELCPEKRLLWEPQLTKVIGSAPLERQIRELGSDVHIFGHTHIPIDMTSEGVRYVQWPLGTLREQSYRTNDMREKGPLLVYSHDGSEGGLRPPVHTWWGEFYKAYPRDPHDTEIPENTYEYMRQR 459 HSP 2 Score: 108.227 bits (269), Expect = 1.649e-21 Identity = 88/321 (27.41%), Postives = 135/321 (42.06%), Query Frame = 0
Query: 83 STSSSPPPVMTFKPPSLTEITVTPDLYDAVRIYAMSDLHVDYRKNLELFQYWCSRPASGNSLSSLALEQEKSDRIYSILLIPGDIASNPANFKAVLAATRRRFHATFIVAGNHDLWVSNSLADQGVVTSIDKLAWIHQVAEGNGDEPEGEEDTEDGVGGKEEEGGWSEEGKEGGPGVPGRRGESEGDWSGTPEPSANPGGSRAAHLPISPSSSSSRRGKVFTGPVRFHTPRGERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQE-LAVWFARQNEIFLADTRVR 402
+T+S+P + E+ + P +R++++SDLH D + NL + W S G+ E +L++ GDI+S+ L R+ F V GNH++W + GV S++KL +H + E G + VGG+ + G +E G ++S RG G + L + PLLSWYHASWD EP+LP E L R F +RW D+ C WPE+ L REDFV++ + +A +FARQN+ + R +
Sbjct: 9 TTASAPAGAALVLSRPIDEVVLPPGR--GLRVHSLSDLHTDSKDNLAWVKSWASWKGDGDGDLGEGHED--------VLIVAGDISSSLERSAETLECLMERYDEVFFVVGNHEMWTGRRKPEGGV-DSVEKLVQMHVLCESLGVR---TDPVIFAVGGEGKSGAAAERG-----------------------------------------TTSEERGGAMGG--------RQELAVFPLLSWYHASWDDEPNLPPE----LQLRRGDFLRRWRDYSYCHWPED-LCSREDFVTVDRDAPPVIAEFFARQNDACIQAFRAK 261
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|760439333|ref|XP_011396735.1| (hypothetical protein F751_6825 [Auxenochlorella protothecoides] >gi|675351417|gb|KFM23857.1| hypothetical protein F751_6825 [Auxenochlorella protothecoides]) HSP 1 Score: 142.124 bits (357), Expect = 2.458e-34 Identity = 89/221 (40.27%), Postives = 109/221 (49.32%), Query Frame = 0
Query: 319 ILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPE-EVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTIPTRWGAHYREAARNVLETELAPWV 538
++PLLSWYHASWD EPDLP A E T DF C W L +D ++ + AR A V G PP +I+FSHFLP + L PEKR L P L K +GS PL ++ LRP HVFGHTH D + G+RY+QWPLG EQ R+ P+LV+D RG L W +HY R + APWV
Sbjct: 110 VVPLLSWYHASWDREPDLPG---ATPIEKVTTIMM---DFHACTWSSVPGLTPADDSIAWHMDSLNDPG-TARVLAALDAAEAVSGVRPP-----LITFSHFLPDQRLLPEKRMLHHPNLAKAVGSDPLAARIARLRPAAHVFGHTHFSWDAELDGVRYVQWPLGYPAEQRRRGRPAADWRPMLVYDGARGELTSPRACYWSSHYAAVRRTPWDLTPAPWV 318
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|1150749295|ref|XP_020248782.1| (uncharacterized protein LOC109826195 isoform X3 [Asparagus officinalis]) HSP 1 Score: 139.043 bits (349), Expect = 3.058e-34 Identity = 86/237 (36.29%), Postives = 125/237 (52.74%), Query Frame = 0
Query: 315 ERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPD------LHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTI-PTRWGAHYREAARNVLETELAPWVKKYWER 544
E L I+PL SWYH S+DTE D+ + P+ E DF CKWP ++ D LA +F + NE ++T E + + +I+FSHF+PR+ELCPEKR L P LPK+IGS L ++ ++ + HVFGHTH D ++G+RY+Q PL E+ R+ P ++ E G T+ P+ W +Y + R+ TELAPWV +++ER
Sbjct: 24 EGLGIIPLFSWYHKSFDTEKDITRVRI-------PSLEMACKDFHACKWPAQLDDD-----------ISLANYFDKMNE---SNTSFMEEILRS-SSQLITFSHFVPRQELCPEKRMLFYPNLPKIIGSDFLEARLRSIHGENGSASSCHVFGHTHFCWDAVLEGLRYIQSPLAYPRERKRRMNGGEDWLPFCIYHE---GFTDTLSPSYWSDYYSKNKRDPENTELAPWVARFYER 235
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|1141975350|gb|ONK56576.1| (uncharacterized protein A4U43_C10F10260 [Asparagus officinalis]) HSP 1 Score: 139.428 bits (350), Expect = 1.217e-33 Identity = 86/237 (36.29%), Postives = 125/237 (52.74%), Query Frame = 0
Query: 315 ERLLILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALRPD------LHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTI-PTRWGAHYREAARNVLETELAPWVKKYWER 544
E L I+PL SWYH S+DTE D+ + P+ E DF CKWP ++ D LA +F + NE ++T E + + +I+FSHF+PR+ELCPEKR L P LPK+IGS L ++ ++ + HVFGHTH D ++G+RY+Q PL E+ R+ P ++ E G T+ P+ W +Y + R+ TELAPWV +++ER
Sbjct: 89 EGLGIIPLFSWYHKSFDTEKDITRVRI-------PSLEMACKDFHACKWPAQLDDD-----------ISLANYFDKMNE---SNTSFMEEILRS-SSQLITFSHFVPRQELCPEKRMLFYPNLPKIIGSDFLEARLRSIHGENGSASSCHVFGHTHFCWDAVLEGLRYIQSPLAYPRERKRRMNGGEDWLPFCIYHE---GFTDTLSPSYWSDYYSKNKRDPENTELAPWVARFYER 300
BLAST of EWM22127.1 vs. NCBI_GenBank
Match: gi|586719893|ref|XP_006848639.1| (uncharacterized protein LOC18438392 [Amborella trichopoda] >gi|1173124237|ref|XP_020525641.1| uncharacterized protein LOC18438392 [Amborella trichopoda] >gi|1173124239|ref|XP_020525642.1| uncharacterized protein LOC18438392 [Amborella trichopoda] >gi|1173124241|ref|XP_020525643.1| uncharacterized protein LOC18438392 [Amborella trichopoda] >gi|548851990|gb|ERN10220.1| hypothetical protein AMTR_s00171p00047960 [Amborella trichopoda]) HSP 1 Score: 140.198 bits (352), Expect = 2.907e-33 Identity = 87/234 (37.18%), Postives = 113/234 (48.29%), Query Frame = 0
Query: 319 ILPLLSWYHASWDTEPDLPAEVVADLYEGRPTFEQRWADFRCCKWPEEVLQDREDFVSLQTEKQELAVWFARQNEIFLADTRVRGEGPPAEKTTVISFSHFLPREELCPEKRFLLEPMLPKVIGSTPLRKQVEALR------PDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVFDEERGGLVGTIP-TRWGAHYREAARNVLETELAPWVKKYWERK 545
I+PL SWYH S+D E D+ + P+ + DF CKWP+ +L ++ LA F N T G + +I+FSHFLPR ELCPEKR L P LPKVIGS L ++ L H+FGHTH D+ +QGIRY+Q PL E+ R P +FD E GGL + W +Y R T+LAPWV KY+ R+
Sbjct: 162 IIPLFSWYHESFDREKDITGVAI-------PSLKMACKDFHACKWPK----------NLSSKDLSLAKHFDDINAKHTDAT----NGIVSRSKQIITFSHFLPRPELCPEKRMLFYPNLPKVIGSDYLEARLRTLHGIHGSPHACHMFGHTHFCWDIWLQGIRYVQAPLAYPRERKRGMNGGAEWLPFCIFDSENGGLPPKLSECYWSDYYTSHKREPDNTQLAPWVAKYYSRR 374 The following BLAST results are available for this feature:
BLAST of EWM22127.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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