EWM22145.1, cds8536 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|585102566|gb|EWM22145.1| (er lumen protein retaining receptor [Nannochloropsis gaditana]) HSP 1 Score: 460.299 bits (1183), Expect = 7.586e-164 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query: 1 MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFRLEFALIPCLVLAMITSLIRGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSAGFK 226
MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFRLEFALIPCLVLAMITSLIRGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSAGFK
Sbjct: 1 MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFRLEFALIPCLVLAMITSLIRGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSAGFK 226
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|219122751|ref|XP_002181703.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406979|gb|EEC46917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 317.39 bits (812), Expect = 2.153e-107 Identity = 154/227 (67.84%), Postives = 184/227 (81.06%), Query Frame = 0
Query: 1 MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSF-RLEFALIPCLVLAMITSLI--RGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSAG 224
MSMNIFR AGDM HVFSII+LLLRL VAKNA G+SL+T ELFL+VF TRYLDL F S+YNS MK+LYI STA+I++ IR++EP +STY++SQD+F +FA+ PC +A+IT LI + F +EL WTFSIYLE++AILPQLIVLQRY VENLTG+YIFF+GAYR LYI+NWIYRA+TEK Y H +VVY CG VQT LYADFFYYY +SK GG F+LPT S
Sbjct: 1 MSMNIFRLAGDMCHVFSIIVLLLRLRVAKNAQGISLRTNELFLLVFVTRYLDLFFNFFSIYNSVMKVLYIVSTASIVYTIRFKEPIKSTYEKSQDTFLHWKFAVAPCFAIALITHLIGSKRFDMVELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRALYIVNWIYRAHTEKGYKHHWVVYFCGVVQTLLYADFFYYYLKSKSKGGKFTLPTKSTN 227
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|1072236259|gb|OEU20987.1| (KDEL receptor A [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 307.375 bits (786), Expect = 2.269e-103 Identity = 149/226 (65.93%), Postives = 181/226 (80.09%), Query Frame = 0
Query: 3 MNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSF-RLEFALIPCLVLAMITSLI----RGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSA 223
MNIFRF GDMSH+FSII+LLLRL VAKNA G+S+KT EL+L+VF TRYLDL F S YNS MK++YI +TA+I++ I+++EP +STY++ QDSF +FA IPC VLA IT LI F F+EL WTFSIYLE + I+PQL+VLQRY VENLTG+Y+FF+GAYR LYILNWIYRA TEK+Y H +VVY CG +QT LYADFFYYY +SK GG FSLPTS++
Sbjct: 1 MNIFRFCGDMSHLFSIIVLLLRLRVAKNAQGISVKTHELYLLVFLTRYLDLFTTFYSAYNSVMKLVYIAATASIVYTIKFQEPIKSTYEKGQDSFLHWQFAAIPCAVLAFITHLIGSGIADFNFMELLWTFSIYLECLTIMPQLVVLQRYREVENLTGNYVFFMGAYRALYILNWIYRANTEKNYRHHWVVYICGTIQTLLYADFFYYYLKSKAKGGKFSLPTSAS 226
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|1210514553|dbj|GAX26510.1| (ER lumen protein retaining receptor [Fistulifera solaris]) HSP 1 Score: 302.368 bits (773), Expect = 2.331e-101 Identity = 160/228 (70.18%), Postives = 183/228 (80.26%), Query Frame = 0
Query: 1 MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFR-LEFALIPCLVLAMITSLI----RGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSA 223
MSMNIFR AGDMSHVFSI++LLLRL VAKNA G+S++T ELFLIVF TRYLDL F SLYNS MKILYI STA+II+ I+++EP +STYD+SQDSF +FA+ PC VLA +T LI GF FIEL WTFSIYLE++AILPQLIVLQRY VENLTG+YIFF+GAYR LYILNWIYRA E HY H +VVY CG +QT LY DFFYYYF+SK GG F+LPT
Sbjct: 1 MSMNIFRLAGDMSHVFSILVLLLRLRVAKNAQGISVRTHELFLIVFLTRYLDLFTTFYSLYNSIMKILYIVSTASIIYTIKFQEPIKSTYDKSQDSFLYWQFAVAPCAVLASVTHLIGSGISGFSFIELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRFLYILNWIYRANFEAHYQHHWVVYICGVLQTLLYVDFFYYYFKSKKSGGRFTLPTKGT 228
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|1210513626|dbj|GAX27498.1| (ER lumen protein retaining receptor [Fistulifera solaris]) HSP 1 Score: 301.982 bits (772), Expect = 2.601e-101 Identity = 160/228 (70.18%), Postives = 183/228 (80.26%), Query Frame = 0
Query: 1 MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFR-LEFALIPCLVLA----MITSLIRGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSA 223
MSMNIFR AGDMSHVFSI++LLLRL VAKNA G+S++T ELFLIVF TRYLDL F SLYNS MKILYI STA+II+ I+++EP +STYD+SQDSF +FA+ PC VLA +I S I GF FIEL WTFSIYLE++AILPQLIVLQRY VENLTG+YIFF+GAYR LYILNWIYRA E HY H +VVY CG +QT LY DFFYYYF+SK GG F+LPT
Sbjct: 1 MSMNIFRLAGDMSHVFSILVLLLRLRVAKNAQGISVRTHELFLIVFLTRYLDLFTTFYSLYNSIMKILYIASTASIIYTIKFQEPIKSTYDKSQDSFLYWQFAVAPCAVLASATHLIGSGISGFSFIELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRFLYILNWIYRANFEAHYQHHWVVYICGVLQTLLYVDFFYYYFKSKKSGGRFTLPTKGT 228
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|676397749|ref|XP_009042152.1| (hypothetical protein AURANDRAFT_55650 [Aureococcus anophagefferens] >gi|323447211|gb|EGB03147.1| hypothetical protein AURANDRAFT_55650 [Aureococcus anophagefferens]) HSP 1 Score: 301.597 bits (771), Expect = 2.995e-101 Identity = 147/220 (66.82%), Postives = 180/220 (81.82%), Query Frame = 0
Query: 3 MNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSF-RLEFALIPCLVLAMITSLI-RGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPT 220
MN+FRFAGDMSHV SII+L+LRL V+K+A G+S+KTQELFLIVF TRYLDL F S+YNS MK+ YI +TA+II+MIR++EPY+S YD+SQDSF ++FA+ PC VLA+ + LI R I+L WTFSI+LEA+AI+PQL VLQRY VENLTGHY+FFLGAYR LYILNW+YR+Y E Y H+++VY G +QTALY DFFYYY SKYYGG +LPT
Sbjct: 1 MNLFRFAGDMSHVVSIIVLILRLRVSKSAVGISIKTQELFLIVFVTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHVKFAVAPCAVLALFSCLIKRELNPIDLLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYVSGAIQTALYVDFFYYYMVSKYYGGKLTLPT 220
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|224001002|ref|XP_002290173.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973595|gb|EED91925.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 300.442 bits (768), Expect = 1.284e-100 Identity = 152/227 (66.96%), Postives = 174/227 (76.65%), Query Frame = 0
Query: 3 MNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFR-LEFALIPCLVLAMITSLIRGFGFI------ELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSS 222
MNIFR GDMSHVFSII+LLLRL VA+NA G+SL+T ELFL+VF TRY DL + SLYNS MK+LYI STA+I++ IR +EP STYD++QD+FR EFA+ PC VLA +T LI G G EL WTFSIYLEAVAILPQLIVLQRY VENLTG+YIFF+G YR LYI+NW++RAY E Y H YVVY CG +QT LYADFFYYY SK GG FSLPT
Sbjct: 1 MNIFRLCGDMSHVFSIIVLLLRLRVARNAQGISLRTHELFLLVFLTRYTDLFTTYYSLYNSVMKVLYIASTASIVYTIRLQEPICSTYDKAQDTFRHWEFAVAPCAVLATLTHLISGGGLFSVVDVQELLWTFSIYLEAVAILPQLIVLQRYRDVENLTGNYIFFMGLYRALYIVNWVFRAYNEPGYRHHYVVYFCGVLQTLLYADFFYYYVMSKRRGGKFSLPTKG 227
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|676393683|ref|XP_009040119.1| (hypothetical protein AURANDRAFT_54782 [Aureococcus anophagefferens] >gi|323449329|gb|EGB05218.1| hypothetical protein AURANDRAFT_54782 [Aureococcus anophagefferens]) HSP 1 Score: 298.516 bits (763), Expect = 5.215e-100 Identity = 145/220 (65.91%), Postives = 179/220 (81.36%), Query Frame = 0
Query: 3 MNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSF-RLEFALIPCLVLAMITSLI-RGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPT 220
MN+FRFAGDMSHV SII+L+LRL V+K+A G+SLKTQELFLIVF TRYLDL F S+YNS MK+ YI +TA+II+MIR++EPY+S YD+SQDSF +FA+ PC +LA+ + LI R +++ WTFSI+LEA+AI+PQL VLQRY VENLTGHY+FFLGAYR LYILNW+YR+Y E Y H+++VY G +QTALY DFFYYY SKYYGG +LPT
Sbjct: 1 MNLFRFAGDMSHVVSIIVLILRLRVSKSAVGISLKTQELFLIVFMTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHFKFAVAPCAMLALFSCLIKRELNPVDVLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYISGAIQTALYVDFFYYYIVSKYYGGKLTLPT 220
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|397569620|gb|EJK46859.1| (hypothetical protein THAOC_34459 [Thalassiosira oceanica]) HSP 1 Score: 294.664 bits (753), Expect = 2.665e-98 Identity = 151/231 (65.37%), Postives = 177/231 (76.62%), Query Frame = 0
Query: 1 MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFR-LEFALIPCLVLAMITSLIRGFG-----FI---ELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSS 222
MSMN+FR GDMSHVFSI++LLLRL VAKNA+G+SL+T ELFL+VF TRY DL + SLYNS MKI YI STA+I++MIR +P +TYD++QD+FR FA+ PC VLA +T I G G F+ EL WTFSIYLE++AILPQLI+LQRY VENLTG+YIFF+G+YR LYILNWIYR Y E Y H YV Y CG +QT LYADFFYYY QSK GG FSLPT S
Sbjct: 1 MSMNVFRLCGDMSHVFSIVVLLLRLRVAKNASGISLRTHELFLLVFLTRYTDLFTTYYSLYNSCMKIAYILSTASIVYMIRLSDPICTTYDKAQDTFRHWAFAVGPCAVLATLTHFISGEGSGYSLFVNIQELLWTFSIYLESIAILPQLILLQRYREVENLTGNYIFFMGSYRALYILNWIYRTYYEPGYRHHYVAYFCGVLQTLLYADFFYYYMQSKRRGGRFSLPTKS 231
BLAST of EWM22145.1 vs. NCBI_GenBank
Match: gi|299471879|emb|CBN77049.1| (PGPS/D6 [Ectocarpus siliculosus]) HSP 1 Score: 264.618 bits (675), Expect = 1.565e-86 Identity = 136/226 (60.18%), Postives = 162/226 (71.68%), Query Frame = 0
Query: 3 MNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSF-RLEFALIPCLVLAMI-------TSLIRGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPT 220
MNIFR AGDMSH SI++LLL+L +K+A G+SLKTQELFL+VF TRY+DL RFIS YNS MK+LYI T+ II+MIR P ++TYD+SQDSF +FA+ PC L ++ T + I FWTFS LE AI+PQL+VLQRY VENLTGHY+F LGAYR LYI+NW+YRA+ E Y H +VY G VQT LYADFFYYY SKYYGG SLP
Sbjct: 1 MNIFRLAGDMSHTASILMLLLKLRASKSAAGISLKTQELFLVVFVTRYVDLFFRFISWYNSIMKVLYITLTSLIIYMIREHIPIKATYDKSQDSFLHWQFAVAPCAALGLLIHSWSWWTVSMPFSSLINFFWTFSEVLEPFAIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYIVNWVYRAHYEAGYQHHVLVYIAGLVQTLLYADFFYYYAISKYYGGRMSLPA 226 The following BLAST results are available for this feature:
BLAST of EWM22145.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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