EWM22141.1, cds8531 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22141.1 vs. NCBI_GenBank
Match: gi|585102562|gb|EWM22141.1| (hypothetical protein Naga_100064g6 [Nannochloropsis gaditana]) HSP 1 Score: 383.259 bits (983), Expect = 8.895e-135 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0 Query: 1 MRDGIPRPDDFSFHSKMRHAILLIDVLVLFGLRASTSAFSVVVAQHRVISLASFSRLNFVPGWKVTPLHYLGVKSRRYRSGSFKMRDGSMVRDFEVGDLVRVQPGTFLDGMDWGGLEGVVTTTWVKCEVDPHCCCAELGTEGPIRVDFVADQGRNAGRLGVGKDKNYNFFNEAELIKLLAVHDRTA 186 MRDGIPRPDDFSFHSKMRHAILLIDVLVLFGLRASTSAFSVVVAQHRVISLASFSRLNFVPGWKVTPLHYLGVKSRRYRSGSFKMRDGSMVRDFEVGDLVRVQPGTFLDGMDWGGLEGVVTTTWVKCEVDPHCCCAELGTEGPIRVDFVADQGRNAGRLGVGKDKNYNFFNEAELIKLLAVHDRTA Sbjct: 1 MRDGIPRPDDFSFHSKMRHAILLIDVLVLFGLRASTSAFSVVVAQHRVISLASFSRLNFVPGWKVTPLHYLGVKSRRYRSGSFKMRDGSMVRDFEVGDLVRVQPGTFLDGMDWGGLEGVVTTTWVKCEVDPHCCCAELGTEGPIRVDFVADQGRNAGRLGVGKDKNYNFFNEAELIKLLAVHDRTA 186
BLAST of EWM22141.1 vs. NCBI_GenBank
Match: gi|1210524468|dbj|GAX16726.1| (hypothetical protein FisN_21Hu168 [Fistulifera solaris]) HSP 1 Score: 63.5438 bits (153), Expect = 1.118e-9 Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0 Query: 76 RRYRSGSFKMRDGSMVRDFEVGDLVRVQPGTFLDGMDWGGLEGVVTTTWVKCEVDPHCCCAE-LGTEGPIRVDFVADQG 153 ++Y + S+ MRD S F VGD V+V M +G+V TW KCEVDP CCCAE + +RVDF + G Sbjct: 4 KKYWASSWTMRDRSASMAFRVGDRVQVTEDLVYRDMKLKHRQGIVVETWEKCEVDPTCCCAEQVDVNMAVRVDFQQEGG 82
BLAST of EWM22141.1 vs. NCBI_GenBank
Match: gi|219127888|ref|XP_002184158.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404389|gb|EEC44336.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 61.6178 bits (148), Expect = 1.302e-8 Identity = 39/99 (39.39%), Postives = 51/99 (51.52%), Query Frame = 0 Query: 83 FKMRDGSMVRDFEVGDLVRVQPGTFLDGMDWGGLEGVVTTTWVKCEVDPHCCCAELGTEG-PIRVDFVADQGRNAGRLGVGKDKNYNFFNEAELIKLLA 180 + MRD S F+VGD V V G+ G +G+V TW KC+VDP CCCAE G +RV F QG A +G +++F E EL + A Sbjct: 39 WTMRDRSASYWFQVGDSVEVLDDVMKAGITLRGRQGIVQETWEKCDVDPTCCCAEQVDVGMAVRVKF---QGSEADESDIG--SFFHYFAEDELRQFFA 132 The following BLAST results are available for this feature:
BLAST of EWM22141.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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