EWM22152.1, cds8524 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22152.1 vs. NCBI_GenBank
Match: gi|585102573|gb|EWM22152.1| (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 937.562 bits (2422), Expect = 0.000e+0 Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0
Query: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDPHSPEKYNAEFHLCELPSDLPPHLLRFIPNLHFAQGIGSRHFCVLVTASKNLEVPQGAPPVEIYVPYASSFTEVCKHGFPLL 455
MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDPHSPEKYNAEFHLCELPSDLPPHLLRFIPNLHFAQGIGSRHFCVLVTASKNLEVPQGAPPVEIYVPYASSFTEVCKHGFPLL
Sbjct: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDPHSPEKYNAEFHLCELPSDLPPHLLRFIPNLHFAQGIGSRHFCVLVTASKNLEVPQGAPPVEIYVPYASSFTEVCKHGFPLL 455
BLAST of EWM22152.1 vs. NCBI_GenBank
Match: gi|585102572|gb|EWM22151.1| (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 764.607 bits (1973), Expect = 0.000e+0 Identity = 371/374 (99.20%), Postives = 372/374 (99.47%), Query Frame = 0
Query: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDP 374
MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHL + P
Sbjct: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLAHAP 374
BLAST of EWM22152.1 vs. NCBI_GenBank
Match: gi|553187395|ref|XP_005854601.1| (hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526] >gi|422294453|gb|EKU21753.1| hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 77.0258 bits (188), Expect = 8.226e-12 Identity = 43/101 (42.57%), Postives = 66/101 (65.35%), Query Frame = 0
Query: 190 LERRPSTLPGAGMGLFLV-QGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRR 289
L+ RPS++P AG GL+L V G+++T +PGL+Y +P+DL A MP E +F+ PP F++ N +LLR V+++ L DG P G+SA F A ++R+
Sbjct: 117 LDVRPSSIPNAGRGLWLKPYQNVAKGDILTLYPGLIYELPHDLAALMP-SEDAFAFAPPDFMIGNAFLLRVS--VSSRDFLCDGRPFGLSAHMFRAISRRQ 214
BLAST of EWM22152.1 vs. NCBI_GenBank
Match: gi|552845072|ref|XP_005851253.1| (hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis] >gi|307110916|gb|EFN59151.1| hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis]) HSP 1 Score: 77.7962 bits (190), Expect = 1.445e-11 Identity = 85/272 (31.25%), Postives = 121/272 (44.49%), Query Frame = 0
Query: 177 VLEDLLDEHWTFRLERRPSTL--PGAGMGLFLVQGRVHAGEVITCHPGLVYRI-PYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNF--IAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGW-GEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDPHSP-EKYNAEFHLCELPSDLPPHLLRFIPNLHF-AQGIGSRHFCVLVTASKNLEVPQGAPPVEIYVPY 440
L + L + F L+RRPS + P AG G+FL G AG ++T +PGLV+ + + L + + + +P PP + + N YLL+ N L+DG P G+SA F AA+ G+P E LV W G + R G + G E LL + LGH++N H P NA F +C LP+ LPP L R++P+L +G + LVTA L G+ PVE+ V Y
Sbjct: 595 ALTEALADTIGFELQRRPSGIQHPDAGDGVFLTAGGCPAGGILTLYPGLVHDMGDFVLLLGVSAPDDACAPAPPAWTLDNHYLLQLR--CLNAACLVDGQPGGLSAQRFQAAAASWAAGQP---------------------EAALVNASWLALGGQQRAELDGRL---------GCEALL-----------RQAALGHMLN--HGPAAAANAAFDMCPLPAALPPSLQRYVPSLSVGGRGEEEVRWVPLVTARTALGATAGS-PVELLVDY 820
BLAST of EWM22152.1 vs. NCBI_GenBank
Match: gi|585105113|gb|EWM23845.1| (hypothetical protein Naga_100273g2 [Nannochloropsis gaditana]) HSP 1 Score: 72.7886 bits (177), Expect = 2.174e-10 Identity = 62/187 (33.16%), Postives = 88/187 (47.06%), Query Frame = 0
Query: 190 LERRPSTLPGAGMGLFLV-QGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDPH 375
L+ RPS++P AG GL+L V G+++T +PGL+Y +P+DL A MP E +F+ PP F++ N +LLR V+++ L DG P G+SA F A + RR ER V W EG + G+ G EGG + + L GHL+NDP
Sbjct: 140 LDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMP-SEDAFAFAPPDFMIGNAFLLRV--SVSSRDFLCDGRPFGLSAHMFRAIS---------------------RRQHERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGK-------------RSSLAWGHLINDPQ 289 The following BLAST results are available for this feature:
BLAST of EWM22152.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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