EWM22151.1, cds8523 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22151.1 vs. NCBI_GenBank
Match: gi|585102572|gb|EWM22151.1| (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 885.56 bits (2287), Expect = 0.000e+0 Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0
Query: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLAHAPRGRHSERGAEGPQDGHTRSWDAGRSCQHDEGDEGGGLKCRGGEVGFLHYGRTAISSL 431
MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLAHAPRGRHSERGAEGPQDGHTRSWDAGRSCQHDEGDEGGGLKCRGGEVGFLHYGRTAISSL
Sbjct: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLAHAPRGRHSERGAEGPQDGHTRSWDAGRSCQHDEGDEGGGLKCRGGEVGFLHYGRTAISSL 431
BLAST of EWM22151.1 vs. NCBI_GenBank
Match: gi|585102573|gb|EWM22152.1| (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 764.607 bits (1973), Expect = 0.000e+0 Identity = 371/374 (99.20%), Postives = 372/374 (99.47%), Query Frame = 0
Query: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLAHAP 374
MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHL + P
Sbjct: 1 MRFLPCPSPLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQNDVGGDNGQDISKSQNLYSHKDLYNKDTLWGAKTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDP 374
BLAST of EWM22151.1 vs. NCBI_GenBank
Match: gi|553187395|ref|XP_005854601.1| (hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526] >gi|422294453|gb|EKU21753.1| hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 77.0258 bits (188), Expect = 8.601e-12 Identity = 43/101 (42.57%), Postives = 66/101 (65.35%), Query Frame = 0
Query: 190 LERRPSTLPGAGMGLFLV-QGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRR 289
L+ RPS++P AG GL+L V G+++T +PGL+Y +P+DL A MP E +F+ PP F++ N +LLR V+++ L DG P G+SA F A ++R+
Sbjct: 117 LDVRPSSIPNAGRGLWLKPYQNVAKGDILTLYPGLIYELPHDLAALMP-SEDAFAFAPPDFMIGNAFLLRVS--VSSRDFLCDGRPFGLSAHMFRAISRRQ 214
BLAST of EWM22151.1 vs. NCBI_GenBank
Match: gi|585105113|gb|EWM23845.1| (hypothetical protein Naga_100273g2 [Nannochloropsis gaditana]) HSP 1 Score: 76.6406 bits (187), Expect = 1.048e-11 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 0
Query: 190 LERRPSTLPGAGMGLFLVQGR-VHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRR 289
L+ RPS++P AG GL+L + V G+++T +PGL+Y +P+DL A MP E +F+ PP F++ N +LLR V+++ L DG P G+SA F A ++R+
Sbjct: 140 LDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMP-SEDAFAFAPPDFMIGNAFLLRV--SVSSRDFLCDGRPFGLSAHMFRAISRRQ 237 The following BLAST results are available for this feature:
BLAST of EWM22151.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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