EWM29797.1, cds852 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|585112378|gb|EWM29797.1| (DNA methylase, N-6 adenine-specific, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 442.965 bits (1138), Expect = 2.049e-157 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
Query: 1 MSELGHIPVVEIEPGDGNDEASKDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPELL 213
MSELGHIPVVEIEPGDGNDEASKDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPELL
Sbjct: 1 MSELGHIPVVEIEPGDGNDEASKDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPELL 213
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|299469605|emb|CBN76459.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 185.652 bits (470), Expect = 4.156e-56 Identity = 91/188 (48.40%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 25 FLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPEL 212
FL +NPEN +NQYWYS ATI VAEV E SG AFLSTPSIYFS+ +R + ++ D D KW+KDPG+++YD+ P +PE LR MVV+DPPF+T +VW Y+ A + LL R G +LC+T+ ENA + LLG F+PSIP+L YQ+S + NY+S RL NPE+
Sbjct: 11 FLMKNPENGDLNQYWYSKATIDAIVAEVGE---FGSGGTAFLSTPSIYFSLDRDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQVWESYTAATKLLL---------RPGGARLVLCSTILENAPFMEELLGASPCEFKPSIPNLVYQYSLYVNYDSKRLASCNPEI 186
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|403369166|gb|EJY84427.1| (N6-adenineMlase domain containing protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 172.555 bits (436), Expect = 4.671e-51 Identity = 87/189 (46.03%), Postives = 118/189 (62.43%), Query Frame = 0
Query: 25 FLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSI-SPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPEL 212
FL +N EN +NQYWYS TI +E E+ IAFLSTPS+YFS+ + ++ S+ D+D K+ KDP +I YDFN P +P EL Q MVV+DPPFIT EVW Y+ A ++LL +G+IL +T+ EN + LLG K+R F+PSIP+L YQ+S +SNY+S L+ NPE+
Sbjct: 7 FLAKNKENADLNQYWYSKPTINFLASECEQFGKK----IAFLSTPSVYFSLKNKEIKANSKCFDYDEKFGKDPNFIFYDFNKPEDIPRELEKQFDMVVIDPPFITREVWEKYTEASKFLLAD-----------DGKILLSTIDENEAFILELLGAKRRQFRPSIPNLVYQYSLYSNYDSEGLNNKNPEI 180
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|255081340|ref|XP_002507892.1| (predicted protein [Micromonas commoda] >gi|226523168|gb|ACO69150.1| predicted protein [Micromonas commoda]) HSP 1 Score: 170.629 bits (431), Expect = 4.757e-50 Identity = 89/202 (44.06%), Postives = 116/202 (57.43%), Query Frame = 0
Query: 15 GDGNDEASKDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHP----GALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPEL 212
GDG+ FL E +NQYWYS TI+ +VE+ + AFLSTPS+YFS+S VR RS D D +W K+PGY+ YDFN P GA EEL+ MV++DPPFIT EVW Y+ RWLLK G ++ +T+ ENA + LLGV + F PSIP+L YQ+ +++YES L NPE+
Sbjct: 13 GDGDKLKKNRFLSTTKEVEDLNQYWYSNRTISAMARDVEDVCAAPETRAAFLSTPSVYFSLSKEVRARSWCFDLDTQWQKEPGYVCYDFNKPIDFEGA--EELKGTFDMVIIDPPFITREVWEKYTETARWLLKPG-----------GHVMASTIQENAPFMKELLGVDPQVFMPSIPTLVYQYYLYASYESKHLKDKNPEI 201
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|302785305|ref|XP_002974424.1| (hypothetical protein SELMODRAFT_414591 [Selaginella moellendorffii] >gi|300158022|gb|EFJ24646.1| hypothetical protein SELMODRAFT_414591 [Selaginella moellendorffii]) HSP 1 Score: 165.236 bits (417), Expect = 3.550e-48 Identity = 87/191 (45.55%), Postives = 114/191 (59.69%), Query Frame = 0
Query: 23 KDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISP-AVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPEL 212
+ F+ R PE +NQYWYS ATIA V EVEE+A+ AFLSTPS+YFS+ +RK S + D D +WS+ P Y+ +DFN P +PE VV+DPPFIT EVW Y+ A R LL G+IL +T+ EN+ L R+L VK + FQP IP L YQ+ F+NY++ L NPE+
Sbjct: 9 RAFVQRTPEKWELNQYWYSAATIAAIVKEVEERATKA----AFLSTPSVYFSLKDLQLRKCSFVFDVDAQWSRSPNYVKWDFNKPKEIPEAFHHSFDFVVIDPPFITSEVWTKYAEAARLLLAEN-----------GKILLSTIMENSQLLERMLDVKPQVFQPCIPHLVYQYVFFTNYDATNLGVPNPEV 184
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|290998289|ref|XP_002681713.1| (predicted protein [Naegleria gruberi] >gi|284095338|gb|EFC48969.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 163.696 bits (413), Expect = 1.404e-47 Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0
Query: 25 FLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIA-FLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPELL 213
FL RNPE + NQYWYS TI FV +E+ N A F+STPS+YFS+S ++K+++L +FD KW KD G++ +DFN P EEL ++ ++DPPFIT EVW Y+ +LK G+++C+T+SEN ++ LL VK +QPSIP L YQ++ ++N+ L VN EL+
Sbjct: 9 FLNRNPEKSEYNQYWYSKDTIGTFVKVIEDHLREDPSNRAVFMSTPSVYFSLSADLQKQAKLFEFDKKWEKDQGFVFWDFNQPEVFSEELNESCTIALIDPPFITREVWEKYATCALKVLKPN-----------GKLICSTISENEVMMDELLKVKPVIYQPSIPHLVYQYNLYTNFNHDALSCVNDELV 187
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|303277561|ref|XP_003058074.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226460731|gb|EEH58025.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 161.77 bits (408), Expect = 1.322e-46 Identity = 82/200 (41.00%), Postives = 115/200 (57.50%), Query Frame = 0
Query: 15 GDGNDEASKDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALP--EELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPEL 212
GDG FL E +NQYWYS TIA ++VE+Q S FLSTPS+YFS++ R RS D D +W+++PG++ YDFN P ++L+ MV++DPPFIT EVW Y+ + LLK G++L +T+ ENA + LLGV + F PSIP+L YQ+ +++YES L + NPE+
Sbjct: 13 GDGEKLKKNRFLSTTKEVEDLNQYWYSNRTIAAMASDVEDQCSSPDSKACFLSTPSVYFSLNKDTRARSWCFDLDTQWAREPGFVKYDFNDPIGFDGFDDLKGTFDMVIIDPPFITREVWEKYTTTAKALLKPG-----------GKVLASTIQENAPFVKELLGVTPQVFMPSIPTLVYQYHLYASYESKFLAEKNPEI 201
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|923129279|ref|XP_013758105.1| (hypothetical protein AMSG_05034 [Thecamonas trahens ATCC 50062] >gi|906555831|gb|KNC49074.1| hypothetical protein AMSG_05034 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 159.458 bits (402), Expect = 7.795e-46 Identity = 82/188 (43.62%), Postives = 111/188 (59.04%), Query Frame = 0
Query: 25 FLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPEL 212
FL + PEN NQYWYS TI V E + IA LSTPS++FS+ V+ R+ L D+D +W + ++ YD+ P P +L + VV+DPPFIT EVW +Y+ + + +G G+I+CTTVSENAD L+ L+GVK F+P IP L YQ+S F+NY SP LD NPE+
Sbjct: 15 FLRKTPENGDFNQYWYSALTIETLVGEAVAHGTR----IACLSTPSVFFSLPKEVQARATLFDYDRQWDELDQFVFYDYREPDDFPAKLTNTYDFVVVDPPFITAEVWELYADVIN---RMVVEG--------GKIICTTVSENADLLDGLVGVKPVRFKPLIPQLVYQYSIFANYTSPALDSPNPEV 187
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|1134896085|gb|OMJ93272.1| (hypothetical protein SteCoe_3854 [Stentor coeruleus]) HSP 1 Score: 159.073 bits (401), Expect = 9.337e-46 Identity = 77/192 (40.10%), Postives = 115/192 (59.90%), Query Frame = 0
Query: 22 SKDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVRKRSRLLDFDLKWSKDPGYIMYDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPELL 213
++ F R E +NQYW+S TI+ V E+E + IA +STPS+YFS+ V+K +++ D D + +DPG++ +DFNHP +P+ +V++DPPFIT EVW Y+RA + + K T GRI+ +++ ENA L LL V+ F+PSIP L YQ+ ++NYES L VNPE++
Sbjct: 2 AQKFFMRYKEKENLNQYWFSENTISALVNEIESLFNEGFIQIACISTPSLYFSLPEQVKKCAKVFDIDTAFQRDPGFVFFDFNHPENIPDNFFGFFDVVIIDPPFITREVWEKYARAAKVICKNT-----------GRIILSSIVENAMMLEELLQVRPCLFKPSIPHLVYQYMFYTNYESRGLSVVNPEII 182
BLAST of EWM29797.1 vs. NCBI_GenBank
Match: gi|953496302|emb|CEG41902.1| (n6-adeninemlase domain containing protein [Plasmopara halstedii]) HSP 1 Score: 154.836 bits (390), Expect = 6.894e-44 Identity = 79/196 (40.31%), Postives = 115/196 (58.67%), Query Frame = 0
Query: 23 KDFLFRNPENTMMNQYWYSPATIAVFVAEVEEQASHTSGNIAFLSTPSIYFSISPAVR-----KRSRLLDFDLKWSKDPGYIM-YDFNHPGALPEELRSQSSMVVLDPPFITEEVWGMYSRAVRWLLKTTKDGEEERTGLEGRILCTTVSENADRLNRLLGVKKRHFQPSIPSLTYQFSTFSNYESPRLDQVNPEL 212
+ F R PE +NQYWYS T+A E E+ SG IAFLSTPS+YF+ R + L DFD K++ + + + +DF P +PE+L V++DPPF+T EVW +Y++ ++ LL++ ++L TT+ ENA + LLG + R F+PSIP L YQ++ ++NYESP LD VNPE+
Sbjct: 12 RTFWQRFPEKEELNQYWYSADTVAALAKEAIEETPEQSGRIAFLSTPSVYFACRNQQRDDLTTRECFLFDFDSKFAPEGRFFVPFDFKKPENVPEKLAGTFDFVIVDPPFVTHEVWELYAKTIKLLLRSKN----------SKVLLTTIEENATVIYNLLGCRLRTFKPSIPHLVYQYAIYTNYESPSLDIVNPEI 197 The following BLAST results are available for this feature:
BLAST of EWM29797.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|