EWM22155.1, cds8519 (CDS) Nannochloropsis gaditana

Overview
NameEWM22155.1
Unique Namecds8519
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:231865..232116 +
Alignment locationKK037249.1:232244..234391 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22155.1
ProductCyclin-like protein
Orig transcript idgnl|cribi|Naga_100064g21.4112.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:231865..232116 +
KK037249.1supercontigKK037249.1:232244..234391 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
Homology
[Close]
BLAST of EWM22155.1 vs. NCBI_GenBank
Match: gi|585102576|gb|EWM22155.1| (Cyclin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1635.93 bits (4235), Expect = 0.000e+0
Identity = 799/799 (100.00%), Postives = 799/799 (100.00%), Query Frame = 0 
Query:    1 MVAMERETCPHAPSQGNLEKTVTDIHPRQHIAAYGRYSHQESCQVREGGNVHGDARFVMSDEDGKSLDCNEELGDALETTLGVENRPPTFSNDRPGIRSEPQTHPFQHLQRFPPQPQRVSDCIPPPLNMAKVPKFSEHCGRTSVTRITSGHPPPPPPPPRTAFGRTQSLPSLSKPPPPPPPHLLRQRSYSSLSRPYRSRTGQFLSQHLDAVDESDPEDVAEMVLNMHIQERDYYAPPWAYFCRLEKDPVLAYWRRGAFQWFSRVVQHMLGNREIIPMATNFLDRYLAASLYPHLTGPYAASHPSPVAPWAPMSGEGLETEGECSPALGVGHGWEGQENFGRVLSAASPSLGQLDGSDEVPVPAVLADERTFEKVAVCALILALKMQQGDSTMNVARKLTNLTSACHLSQGALCAMEFRMMGALGRYLNPPTPGTLIHHLLHFLPARRENRALFLVLDDHANDLALMALETPELVRFPVSIIAVAAILASFGWVRSCLKGEGAGAVGGPMESGHHGEEEMSPGMEMEWLQTLDAKDLKIDWEEAHNCLEVLAREAKKAAALPDRGEGWGGSIYLPQFLALPPALLSQLGGRPTCVPHTPAPCAEVEPGVQMISPSGVEDIGVVEQASLYPPGAPLAAIPGRRGKRGLGARSDPGPVQRLGGQPQGGFYHPPVGSGAAFSKGSAGKEPVLPAPHGLPVPCRPSFHVPHLQHGKHPKQVYAHYFGNHPAPPPPAQAACLVEGRMHAMPPPQNRLEASVNLQPQSKYQQYQQQQQQQRWLQQQQHWQQQQQHWVQQQQRQQWS 799
            MVAMERETCPHAPSQGNLEKTVTDIHPRQHIAAYGRYSHQESCQVREGGNVHGDARFVMSDEDGKSLDCNEELGDALETTLGVENRPPTFSNDRPGIRSEPQTHPFQHLQRFPPQPQRVSDCIPPPLNMAKVPKFSEHCGRTSVTRITSGHPPPPPPPPRTAFGRTQSLPSLSKPPPPPPPHLLRQRSYSSLSRPYRSRTGQFLSQHLDAVDESDPEDVAEMVLNMHIQERDYYAPPWAYFCRLEKDPVLAYWRRGAFQWFSRVVQHMLGNREIIPMATNFLDRYLAASLYPHLTGPYAASHPSPVAPWAPMSGEGLETEGECSPALGVGHGWEGQENFGRVLSAASPSLGQLDGSDEVPVPAVLADERTFEKVAVCALILALKMQQGDSTMNVARKLTNLTSACHLSQGALCAMEFRMMGALGRYLNPPTPGTLIHHLLHFLPARRENRALFLVLDDHANDLALMALETPELVRFPVSIIAVAAILASFGWVRSCLKGEGAGAVGGPMESGHHGEEEMSPGMEMEWLQTLDAKDLKIDWEEAHNCLEVLAREAKKAAALPDRGEGWGGSIYLPQFLALPPALLSQLGGRPTCVPHTPAPCAEVEPGVQMISPSGVEDIGVVEQASLYPPGAPLAAIPGRRGKRGLGARSDPGPVQRLGGQPQGGFYHPPVGSGAAFSKGSAGKEPVLPAPHGLPVPCRPSFHVPHLQHGKHPKQVYAHYFGNHPAPPPPAQAACLVEGRMHAMPPPQNRLEASVNLQPQSKYQQYQQQQQQQRWLQQQQHWQQQQQHWVQQQQRQQWS
Sbjct:    1 MVAMERETCPHAPSQGNLEKTVTDIHPRQHIAAYGRYSHQESCQVREGGNVHGDARFVMSDEDGKSLDCNEELGDALETTLGVENRPPTFSNDRPGIRSEPQTHPFQHLQRFPPQPQRVSDCIPPPLNMAKVPKFSEHCGRTSVTRITSGHPPPPPPPPRTAFGRTQSLPSLSKPPPPPPPHLLRQRSYSSLSRPYRSRTGQFLSQHLDAVDESDPEDVAEMVLNMHIQERDYYAPPWAYFCRLEKDPVLAYWRRGAFQWFSRVVQHMLGNREIIPMATNFLDRYLAASLYPHLTGPYAASHPSPVAPWAPMSGEGLETEGECSPALGVGHGWEGQENFGRVLSAASPSLGQLDGSDEVPVPAVLADERTFEKVAVCALILALKMQQGDSTMNVARKLTNLTSACHLSQGALCAMEFRMMGALGRYLNPPTPGTLIHHLLHFLPARRENRALFLVLDDHANDLALMALETPELVRFPVSIIAVAAILASFGWVRSCLKGEGAGAVGGPMESGHHGEEEMSPGMEMEWLQTLDAKDLKIDWEEAHNCLEVLAREAKKAAALPDRGEGWGGSIYLPQFLALPPALLSQLGGRPTCVPHTPAPCAEVEPGVQMISPSGVEDIGVVEQASLYPPGAPLAAIPGRRGKRGLGARSDPGPVQRLGGQPQGGFYHPPVGSGAAFSKGSAGKEPVLPAPHGLPVPCRPSFHVPHLQHGKHPKQVYAHYFGNHPAPPPPAQAACLVEGRMHAMPPPQNRLEASVNLQPQSKYQQYQQQQQQQRWLQQQQHWQQQQQHWVQQQQRQQWS 799
[Close]
BLAST of EWM22155.1 vs. NCBI_GenBank
Match: gi|553183061|ref|XP_005853835.1| (hypothetical protein NGA_0476701, partial [Nannochloropsis gaditana CCMP526] >gi|422295226|gb|EKU22525.1| hypothetical protein NGA_0476701, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0
Identity = 411/412 (99.76%), Postives = 411/412 (99.76%), Query Frame = 0 
Query:    1 MVAMERETCPHAPSQGNLEKTVTDIHPRQHIAAYGRYSHQESCQVREGGNVHGDARFVMSDEDGKSLDCNEELGDALETTLGVENRPPTFSNDRPGIRSEPQTHPFQHLQRFPPQPQRVSDCIPPPLNMAKVPKFSEHCGRTSVTRITSGHPPPPPPPPRTAFGRTQSLPSLSKPPPPPPPHLLRQRSYSSLSRPYRSRTGQFLSQHLDAVDESDPEDVAEMVLNMHIQERDYYAPPWAYFCRLEKDPVLAYWRRGAFQWFSRVVQHMLGNREIIPMATNFLDRYLAASLYPHLTGPYAASHPSPVAPWAPMSGEGLETEGECSPALGVGHGWEGQENFGRVLSAASPSLGQLDGSDEVPVPAVLADERTFEKVAVCALILALKMQQGDSTMNVARKLTNLTSACHLSQGAL 412
            MVAMERETCPHAPSQGNLEKTVTDIHPRQHIAAYGRYSHQESCQVREGGNVHGDARFVMSDEDGKSLDCNEELGDALETTLGVENRPPTFSNDRPGIRSEPQTHPFQHLQRFPPQPQRVSDCIPPPLNMAKVPKFSEHCGRTSVTRITSGHPPPPPPPPRTAFGRTQSLPSLSKPPPPPPPHLLRQRSYSSLSRPYRSRTGQFLSQHLDAVDESDPEDVAEMVLNMHIQERDYYAPPWAYFCRLEKDPVLAYWRRGAFQWFSRVVQHMLGNREIIPMATNFLDRYLAASLYPHLTGPYAASHPSPVAPWAPMSGEGLETEGECSPALGVGHGWEGQENFGRVLSAASPSLGQLDGSDEVPVPAVLADERTFEKVAVCALILALKMQQGDSTMNVARKLTNLTSACHLSQGA 
Sbjct:   34 MVAMERETCPHAPSQGNLEKTVTDIHPRQHIAAYGRYSHQESCQVREGGNVHGDARFVMSDEDGKSLDCNEELGDALETTLGVENRPPTFSNDRPGIRSEPQTHPFQHLQRFPPQPQRVSDCIPPPLNMAKVPKFSEHCGRTSVTRITSGHPPPPPPPPRTAFGRTQSLPSLSKPPPPPPPHLLRQRSYSSLSRPYRSRTGQFLSQHLDAVDESDPEDVAEMVLNMHIQERDYYAPPWAYFCRLEKDPVLAYWRRGAFQWFSRVVQHMLGNREIIPMATNFLDRYLAASLYPHLTGPYAASHPSPVAPWAPMSGEGLETEGECSPALGVGHGWEGQENFGRVLSAASPSLGQLDGSDEVPVPAVLADERTFEKVAVCALILALKMQQGDSTMNVARKLTNLTSACHLSQGAF 445
The following BLAST results are available for this feature:
BLAST of EWM22155.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102576|gb|EWM22155.1|0.000e+0100.00Cyclin-like protein [Nannochloropsis gaditana][more]
gi|553183061|ref|XP_005853835.1|0.000e+099.76hypothetical protein NGA_0476701, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8546rna8546Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications