EWM22157.1, cds8513 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|585102577|gb|EWM22156.1| (gpn-loop gtpase 2 [Nannochloropsis gaditana]) HSP 1 Score: 616.69 bits (1589), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR 303
METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR
Sbjct: 71 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR 373
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|553186879|ref|XP_005854507.1| (gpn-loop gtpase 2-like protein [Nannochloropsis gaditana CCMP526] >gi|422294551|gb|EKU21851.1| gpn-loop gtpase 2-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR 303
METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQ+ELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR
Sbjct: 71 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQIELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR 373
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|585102578|gb|EWM22157.1| (gpn-loop gtpase 2 [Nannochloropsis gaditana]) HSP 1 Score: 615.92 bits (1587), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR 303
METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR
Sbjct: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKNKAR 303
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|553182965|ref|XP_005853815.1| (gpn-loop gtpase 2-like protein [Nannochloropsis gaditana CCMP526] >gi|422295242|gb|EKU22541.1| gpn-loop gtpase 2-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 293.123 bits (749), Expect = 1.277e-96 Identity = 140/150 (93.33%), Postives = 143/150 (95.33%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDP 150
METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQ+ELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPY ++ P
Sbjct: 71 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQIELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYRTFHWSHSIP 220
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|566018030|gb|ETI40941.1| (hypothetical protein F443_13779 [Phytophthora parasitica P1569] >gi|568043692|gb|ETM40966.1| hypothetical protein L914_13227 [Phytophthora parasitica]) HSP 1 Score: 254.603 bits (649), Expect = 3.097e-80 Identity = 137/288 (47.57%), Postives = 186/288 (64.58%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMD 288
ME +LGPNGGLVYCMDY++ NFDWL ++L AL+ + YVLFDFPGQVELYTH +V +L +L+K G RL VHLVDAHHC+D+ KF+S V++SL++MVRLELPH+NVLSK+DL++ YG+LAF+L+FYTDV+D++ L +E EDEN E R +I + R A R+R++NEAL ++IEDFSLV+F PL IQD I++V+A +DK NG++ G + + A+ L AF Q V DVQ++Y+D
Sbjct: 63 MEELDLGPNGGLVYCMDYIDVNFDWLEDKLAALKDK-YVLFDFPGQVELYTHENSVHSILHKLQKLGYRLAVVHLVDAHHCTDSSKFVSVVMLSLSSMVRLELPHINVLSKIDLMQQYGKLAFNLDFYTDVLDLRYL-------------LDRLDEPDDAEDENQISLEPRHTTIPN----------------SRLAERFRRMNEALVDVIEDFSLVSFLPLQIQDPATIQKVVAAIDKANGFV-------FTGVDFQTAV---LKDYAFGDQ----SVPDVQEKYID 306
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|675171503|ref|XP_008894636.1| (hypothetical protein PPTG_03705 [Phytophthora parasitica INRA-310] >gi|567955408|gb|ETK81041.1| hypothetical protein L915_13431 [Phytophthora parasitica] >gi|567984090|gb|ETL34467.1| hypothetical protein L916_13319 [Phytophthora parasitica] >gi|568013560|gb|ETL87737.1| hypothetical protein L917_13138 [Phytophthora parasitica] >gi|568106145|gb|ETN20781.1| hypothetical protein PPTG_03705 [Phytophthora parasitica INRA-310] >gi|570321661|gb|ETO69609.1| hypothetical protein F444_13833 [Phytophthora parasitica P1976] >gi|570945473|gb|ETP10730.1| hypothetical protein F441_13704 [Phytophthora parasitica CJ01A1] >gi|570977201|gb|ETP38856.1| hypothetical protein F442_13628 [Phytophthora parasitica P10297]) HSP 1 Score: 253.832 bits (647), Expect = 7.227e-80 Identity = 136/288 (47.22%), Postives = 186/288 (64.58%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMD 288
ME +LGPNGGLVYCMDY++ NFDWL ++L AL+ + YVLFDFPGQVELYTH +V +L +L+K G RL VHLVDAHHC+D+ KF+S V++SL++MVRLELPH+NVLSK+DL++ YG+LAF+L+FYTDV+D++ L +E EDEN E R +I + R A R+R++NEAL ++IEDFSLV+F PL IQD I++V+A +DK NG++ G + + A+ + AF Q V DVQ++Y+D
Sbjct: 63 MEELDLGPNGGLVYCMDYIDVNFDWLEDKLAALKDK-YVLFDFPGQVELYTHENSVHSILHKLQKLGYRLAVVHLVDAHHCTDSSKFVSVVMLSLSSMVRLELPHINVLSKIDLMQQYGKLAFNLDFYTDVLDLRYL-------------LDRLDEPDDAEDENQISLEPRHTTIPN----------------SRLAERFRRMNEALVDVIEDFSLVSFLPLQIQDPATIQKVVAAIDKANGFV-------FTGVDFQTAV---VKDYAFGDQ----SVPDVQEKYID 306
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|325184556|emb|CCA19049.1| (GPNloop GTPase 2 putative [Albugo laibachii Nc14]) HSP 1 Score: 251.906 bits (642), Expect = 9.267e-79 Identity = 133/287 (46.34%), Postives = 194/287 (67.60%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYM 287
M+T +LGPNGGLVYCM+Y++ NFDWL +LEA Q + Y+LFDFPGQVELYTH +V ++L++L K RL+AV+LVDAHHC+D+ KFIS VL+SL +MVRLELPH+NVLSKVDL+E YG+LA++L+FYTDV+D++ LL ++ D R G EDENG ++ V D + + R +G+S ++++LNEAL ++IEDFSLV+FHP+ I DA ++ ++ +DK NGY+ + + S +A ++ D + + D+Q+R++
Sbjct: 63 MDTLDLGPNGGLVYCMNYIDSNFDWLAGQLEAFQDK-YLLFDFPGQVELYTHETSVHKILEKLGKLNFRLSAVNLVDAHHCTDSSKFISVVLMSLASMVRLELPHINVLSKVDLMEQYGKLAYNLDFYTDVLDLRFLLNWL-------DAERLGLH-FDEEDENGNQKLVL-----DEDTQRTESRGSGSS-------KFQRLNEALIDVIEDFSLVSFHPIQIHDARSLKALILAIDKSNGYVFTSVDWK--------------SAVAQDSREDNEHIMDMQERFL 314
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|635369967|emb|CCI41885.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 249.595 bits (636), Expect = 1.149e-78 Identity = 129/291 (44.33%), Postives = 188/291 (64.60%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIED 291
M+T LGPNGGLVYCM+Y++ NF+WL+ +LEA Q + Y+LFDFPGQVELYTH +V ++L++L K RL+ VHLVDAHHC+D+ KFIS VL+SL +MVRLELPH+NVLSKVDL+E YG+LA++L++YTDV+D++ LL ++ D R G + DENG + I D + + +S ++R+LNEAL ++IEDFSLV+FHP+ I D ++ ++ +DK NGY+ + + +A + D + V D+Q+R++ +D
Sbjct: 1 MDTLELGPNGGLVYCMNYIDSNFEWLVRQLEAFQDK-YLLFDFPGQVELYTHETSVHKILEKLGKLNVRLSVVHLVDAHHCTDSSKFISVVLMSLASMVRLELPHINVLSKVDLMEQYGKLAYNLDYYTDVLDLRYLLNWL-------DAERLGLQ-VDEVDENG-----NQKLILDEDTSINESKTVVSS-------KFRRLNEALIDVIEDFSLVSFHPIQIHDTTSLKALILAIDKSNGYVFTSVDWK--------------CAVAQDSIVDNEHVMDMQERFLGTQD 256
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|1214696915|gb|OWZ10314.1| (GPN-loop GTPase 2 [Phytophthora megakarya]) HSP 1 Score: 243.047 bits (619), Expect = 1.136e-75 Identity = 133/288 (46.18%), Postives = 180/288 (62.50%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMD 288
ME +LGPNGGLVYCMDY+ NFDWL E+L AL+ + YVLFDFPGQVELYTH +V +LQ+L+K G RL VHLVDAHHC+D+ KF+S V++SL++MVRLELPH+NVLSK+DL++ YG+LAF+L+FYTDV + R DE E+ + S+E T R A R+R++NEAL ++IEDFSLV+F PL IQD I++V+A +DK NG++ G + + A+ + AF Q D+Q++Y+D
Sbjct: 63 MEELDLGPNGGLVYCMDYINVNFDWLEEKLAALKDK-YVLFDFPGQVELYTHENSVHSILQKLQKLGYRLAVVHLVDAHHCTDSSKFVSVVMLSLSSMVRLELPHINVLSKIDLMQQYGKLAFNLDFYTDV--------------------LDLRYLLDRLDEPDDAEDEDQISLE---------PRHTTIPNSRLAERFRRMNEALVDVIEDFSLVSFLPLQIQDPATIQKVVAAIDKANGFV-------FTGVDFQTAV---VKDYAFGDQ----SAPDIQEKYLD 306
BLAST of EWM22157.1 vs. NCBI_GenBank
Match: gi|301109134|ref|XP_002903648.1| (GPN-loop GTPase 2, putative [Phytophthora infestans T30-4] >gi|262097372|gb|EEY55424.1| GPN-loop GTPase 2, putative [Phytophthora infestans T30-4]) HSP 1 Score: 241.506 bits (615), Expect = 4.456e-75 Identity = 132/288 (45.83%), Postives = 181/288 (62.85%), Query Frame = 0
Query: 1 METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMD 288
ME +LGPNGGLVYCMDY++ NF+WL ++L AL+ + YVLFDFPGQVELYTH +V +LQ+L+K G RL VHLVDAHHC+D+ KF+S V++SL++MVRLELPH+NVLSK+DL++ YG+LAF+L+FYTDV + R DE E+ + S+E T R A R+R++NEAL ++IEDFSLV+F PL IQD I++V+A +DK NG++ G + + A+ + AF Q DVQ++Y+D
Sbjct: 63 MEELDLGPNGGLVYCMDYIDVNFEWLEDKLAALKNK-YVLFDFPGQVELYTHENSVHNILQKLQKLGYRLAVVHLVDAHHCTDSSKFVSVVMLSLSSMVRLELPHINVLSKIDLMQQYGKLAFNLDFYTDV--------------------LDLRYLLDRLDEPDDAEDEDQISLE---------PRHTTIPSSRLAERFRRMNEALVDVIEDFSLVSFLPLQIQDPATIQKVVAAIDKANGFV-------FTGVDFQTAV---VKDYAFGDQ----SANDVQEKYLD 306 The following BLAST results are available for this feature:
BLAST of EWM22157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|