EWM22160.1, cds8512 (CDS) Nannochloropsis gaditana

Overview
NameEWM22160.1
Unique Namecds8512
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:211560..211633 -
Alignment locationKK037249.1:211057..211303 -
Alignment locationKK037249.1:210644..210879 -
Alignment locationKK037249.1:210329..210410 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22160.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100064g29.4117.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:211560..211633 -
KK037249.1supercontigKK037249.1:211057..211303 -
KK037249.1supercontigKK037249.1:210644..210879 -
KK037249.1supercontigKK037249.1:210329..210410 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR028108DUF4505
Homology
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|585102581|gb|EWM22160.1| (hypothetical protein Naga_100064g29 [Nannochloropsis gaditana])

HSP 1 Score: 446.817 bits (1148), Expect = 4.256e-159
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0 
Query:    1 MSPCVYHRNRQSTKISMKRMLAHVRYPACTHRISCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSRVHLRRGAGVGNATCSTGVAFHVKIPWNVL 212
            MSPCVYHRNRQSTKISMKRMLAHVRYPACTHRISCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSRVHLRRGAGVGNATCSTGVAFHVKIPWNVL
Sbjct:    1 MSPCVYHRNRQSTKISMKRMLAHVRYPACTHRISCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSRVHLRRGAGVGNATCSTGVAFHVKIPWNVL 212
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|553182968|ref|XP_005853816.1| (hypothetical protein NGA_0443110, partial [Nannochloropsis gaditana CCMP526] >gi|422295243|gb|EKU22542.1| hypothetical protein NGA_0443110, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 330.102 bits (845), Expect = 1.343e-113
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:   25 RYPACTHRISCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSR 183
            RYPACT R+SCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSR
Sbjct:    1 RYPACTPRLSCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSR 159
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|553186892|ref|XP_005854511.1| (hypothetical protein NGA_0443120, partial [Nannochloropsis gaditana CCMP526] >gi|422294555|gb|EKU21855.1| hypothetical protein NGA_0443120, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 183.726 bits (465), Expect = 9.255e-57
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0 
Query:   25 RYPACTHRISCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFF 113
            RYPACT R+SCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFF
Sbjct:    1 RYPACTPRLSCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFF 89
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|325180815|emb|CCA15225.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 114.005 bits (284), Expect = 9.405e-28
Identity = 71/174 (40.80%), Postives = 99/174 (56.90%), Query Frame = 0 
Query:   29 CTHRISCPCTSFST--SSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDT----GLHPS---YPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLV-FGGG-LQQRFDPSRVHLRRGAG 191
            C+ RIS    + S+    S+  P +ED YL+    + IKS  FY + G  RRYFY +DLQGRL+LE++  KN+ + LK  KFL FFF  +R N +    G   S   YP+ SPCGKEMNY+  AD P+VF DL        K  ++G  ++ +GGG L   F P+++ +    G
Sbjct:    8 CSRRISESIRARSSHCEISTTDPSNEDKYLELKQLRDIKSEEFYSKHGAHRRYFYYIDLQGRLFLEDTKPKNIATSLKSPKFLRFFFSNVRPNKSDQCVGERASLLEYPYCSPCGKEMNYIKCADRPIVFDDL-------SKDSEKGKWMLRYGGGELCFPFQPAQLRISTSTG 174
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|1183371357|gb|ORX97189.1| (hypothetical protein K493DRAFT_314163 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 108.612 bits (270), Expect = 4.790e-26
Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:   77 RRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSRVHLRRGAG 191
            R YFY +D+ G+L+LE++  KN T+C KD +FL+FFF+++R NDTG +  YP+VSPCGKE+NY+L  D P+VF DL             G+ LV+ G  +  F P ++ +   +G
Sbjct:   33 REYFYHIDVHGQLFLEDTKPKNFTTCFKDKRFLDFFFQRLRVNDTGRNEQYPYVSPCGKELNYILSEDAPIVFSDL------------DGEQLVWAGDKRFLFHPEKILVSSTSG 135
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|675176139|ref|XP_008896954.1| (hypothetical protein PPTG_05200 [Phytophthora parasitica INRA-310] >gi|566011521|gb|ETI34432.1| hypothetical protein F443_19086 [Phytophthora parasitica P1569] >gi|567949046|gb|ETK74781.1| hypothetical protein L915_18511 [Phytophthora parasitica] >gi|567977711|gb|ETL28208.1| hypothetical protein L916_18411 [Phytophthora parasitica] >gi|568007223|gb|ETL81466.1| hypothetical protein L917_18240 [Phytophthora parasitica] >gi|568037064|gb|ETM34661.1| hypothetical protein L914_18324 [Phytophthora parasitica] >gi|568102716|gb|ETN17387.1| hypothetical protein PPTG_05200 [Phytophthora parasitica INRA-310] >gi|570315275|gb|ETO63223.1| hypothetical protein F444_19039 [Phytophthora parasitica P1976] >gi|570939074|gb|ETP04331.1| hypothetical protein F441_18895 [Phytophthora parasitica CJ01A1] >gi|570969348|gb|ETP32467.1| hypothetical protein F442_18867 [Phytophthora parasitica P10297] >gi|970656635|gb|KUF94621.1| hypothetical protein AM587_10012225 [Phytophthora nicotianae])

HSP 1 Score: 108.227 bits (269), Expect = 2.201e-25
Identity = 70/164 (42.68%), Postives = 90/164 (54.88%), Query Frame = 0 
Query:   50 GSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPS--------YPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGG-LQQRFDPSRVHLRRGAGVGNATCSTGVAFH 204
              ED YL+    K IKS  FY+ +  +RRYFY +DLQGRL+LE++  KN+ + LK  KFL FFF Q+R N      S        YPF SPCGKEMN++  AD P V+ D    L  +E+SG     LVFGGG L   F P  + +         + STG  +H
Sbjct:   24 ADEDKYLELKQLKDIKSEEFYDRQAHKRRYFYYIDLQGRLFLEDTRPKNIATSLKSAKFLRFFFSQVRPNGLAQCKSKEEEDFLEYPFRSPCGKEMNFIKCADRPFVYED----LRRDERSGKW--TLVFGGGELTMPFLPETLRI---------SLSTGRLYH 172
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|1214701703|gb|OWZ14032.1| (putative mitochondrial protein [Phytophthora megakarya])

HSP 1 Score: 107.457 bits (267), Expect = 3.916e-25
Identity = 78/198 (39.39%), Postives = 99/198 (50.00%), Query Frame = 0 
Query:   20 MLAHVRY--PACTHRISCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRN--------DTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGD--CLVFGGG-LQQRFDPSRVHLRRGAGVGNATCSTGVAFH 204
            +LAH+R   P    R      SF T+        ED YL+    K IKS  FY+ +  +RRYFY VDLQGRL+LE++  KN+ + LK  KFL FFF Q+R N        +      YP  SPCGKEMN++  AD P VF DL           D+ D   LVFGGG L   F P  + +         + STG  +H
Sbjct:    2 VLAHLRRWRPLSAWRGQYGVRSFGTAD-------EDKYLELKQLKDIKSEGFYDLQAHKRRYFYYVDLQGRLFLEDTRPKNIATSLKSAKFLRFFFSQVRPNGIAQCKAKEEEEFLEYPHRSPCGKEMNFIKCADRPFVFEDL---------RRDKNDKWALVFGGGELTMPFLPETLRI---------SLSTGRLYH 174
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|953501752|emb|CEG37201.1| (Protein of unknown function DUF4505 [Plasmopara halstedii])

HSP 1 Score: 106.301 bits (264), Expect = 1.176e-24
Identity = 65/151 (43.05%), Postives = 85/151 (56.29%), Query Frame = 0 
Query:   50 GSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRN--------DTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGG-LQQRFDPSRVHLRRGAG 191
             +ED YL+    K IKS  FYEE+  +RRYFY +DLQGRL+LE++  KN+ + LK  KFL FFF Q++ N        D      YP+ SPCGKE N++  AD P+VF D    L  ++ SG     L FGGG L   F P  + +    G
Sbjct:   22 AAEDKYLELKQLKDIKSVRFYEEQSQKRRYFYYIDLQGRLFLEDTRPKNIATSLKSAKFLRFFFSQVQPNSILQCNVKDEEQFLDYPYRSPCGKETNFIKCADRPLVFED----LRRDDISGKW--MLSFGGGELAMPFLPDTLRISLSTG 166
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|1000780909|gb|KXN72100.1| (hypothetical protein CONCODRAFT_16438 [Conidiobolus coronatus NRRL 28638])

HSP 1 Score: 104.76 bits (260), Expect = 1.426e-24
Identity = 51/136 (37.50%), Postives = 80/136 (58.82%), Query Frame = 0 
Query:   56 LDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSRVHLRRGAG 191
            +++  ++QI S+   +    +R YFY +D  G+L+LEE+  KN T+C KD KFLNFFF++IR N+  +   Y ++SPCG E+N++   D P+VFHDL+          D  D L +GG  +  F P ++ +    G
Sbjct:   11 INKVAQRQIYSYTHTKTHDYKREYFYFIDFHGQLFLEETTPKNFTTCFKDPKFLNFFFKRIRYNN-KVDNDYSYLSPCGVEINFIKSEDSPIVFHDLI----------DSNDNLKWGGNFEFPFQPGKLSVCTNTG 135
[Close]
BLAST of EWM22160.1 vs. NCBI_GenBank
Match: gi|1072233914|gb|OEU18644.1| (hypothetical protein FRACYDRAFT_163328, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 102.449 bits (254), Expect = 1.780e-24
Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 0 
Query:   71 EEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIR-------------RNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPALSGNEKSGDRGDCLVFGGGLQQRFDPSRVHLRRGAG 191
            +++  +R YFY +DLQGRL+LEE+  KN+TS +KD KFLNFFF +IR              +D      YPFVS CG E+NY+ PA  P+VFH L+          +  D L++GG L  +FD +R+ + + +G
Sbjct:    1 QQQRKRRYYFYNIDLQGRLFLEETSPKNITSSIKDTKFLNFFFSKIRCATVKEIDFLIEEMDDDEEDIQYPFVSKCGFEINYIRPAATPIVFHTLVT---------NNDDRLLYGGNLSVQFDSNRLAISKRSG 125
The following BLAST results are available for this feature:
BLAST of EWM22160.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102581|gb|EWM22160.1|4.256e-159100.00hypothetical protein Naga_100064g29 [Nannochlorops... [more]
gi|553182968|ref|XP_005853816.1|1.343e-11398.74hypothetical protein NGA_0443110, partial [Nannoch... [more]
gi|553186892|ref|XP_005854511.1|9.255e-5797.75hypothetical protein NGA_0443120, partial [Nannoch... [more]
gi|325180815|emb|CCA15225.1|9.405e-2840.80conserved hypothetical protein [Albugo laibachii N... [more]
gi|1183371357|gb|ORX97189.1|4.790e-2643.48hypothetical protein K493DRAFT_314163 [Basidiobolu... [more]
gi|675176139|ref|XP_008896954.1|2.201e-2542.68hypothetical protein PPTG_05200 [Phytophthora para... [more]
gi|1214701703|gb|OWZ14032.1|3.916e-2539.39putative mitochondrial protein [Phytophthora megak... [more]
gi|953501752|emb|CEG37201.1|1.176e-2443.05Protein of unknown function DUF4505 [Plasmopara ha... [more]
gi|1000780909|gb|KXN72100.1|1.426e-2437.50hypothetical protein CONCODRAFT_16438 [Conidiobolu... [more]
gi|1072233914|gb|OEU18644.1|1.780e-2441.04hypothetical protein FRACYDRAFT_163328, partial [F... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8539rna8539Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications