EWM29825.1, cds850 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29825.1 vs. NCBI_GenBank
Match: gi|585112406|gb|EWM29825.1| (hypothetical protein Naga_100017g41 [Nannochloropsis gaditana]) HSP 1 Score: 807.749 bits (2085), Expect = 0.000e+0 Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0
Query: 1 MAKAFEGSSGRGEHGGHGSYRRCHSGAHAEAITSMGDPAARSVRQIQLYRVPLLDMANASEGVQSGSGKLRVYGPEFDGVVRPGGRGGPVRERDAATEMERGGGGGGARGGEGGEIEDGGEADFFPPNDPEGPMVETELLQSLVTIIRQEGIEQPVRLLITGSLAEAMTDSLRDGQSGTQELAKELVMEVLADPNSAAAVQHLLMRPELAASLRGLVHPLLLLPFTKRESHRLLKQQLDWLMVRNPATEQSLGGLGQLLLRLASTRAAIASLLSWSLSPSGPLPPLVTDLTSDRLVPLLAPATTGALTGAVHEALEDEYIRELAKDTMKGLLLRVAKMHAAAAAAAAEARRREDAESREVAVKREEEEEGEGGHGAETEGGGGRAEDPEGEDAGERGPLKGDERGKEVLDLGRR 414
MAKAFEGSSGRGEHGGHGSYRRCHSGAHAEAITSMGDPAARSVRQIQLYRVPLLDMANASEGVQSGSGKLRVYGPEFDGVVRPGGRGGPVRERDAATEMERGGGGGGARGGEGGEIEDGGEADFFPPNDPEGPMVETELLQSLVTIIRQEGIEQPVRLLITGSLAEAMTDSLRDGQSGTQELAKELVMEVLADPNSAAAVQHLLMRPELAASLRGLVHPLLLLPFTKRESHRLLKQQLDWLMVRNPATEQSLGGLGQLLLRLASTRAAIASLLSWSLSPSGPLPPLVTDLTSDRLVPLLAPATTGALTGAVHEALEDEYIRELAKDTMKGLLLRVAKMHAAAAAAAAEARRREDAESREVAVKREEEEEGEGGHGAETEGGGGRAEDPEGEDAGERGPLKGDERGKEVLDLGRR
Sbjct: 1 MAKAFEGSSGRGEHGGHGSYRRCHSGAHAEAITSMGDPAARSVRQIQLYRVPLLDMANASEGVQSGSGKLRVYGPEFDGVVRPGGRGGPVRERDAATEMERGGGGGGARGGEGGEIEDGGEADFFPPNDPEGPMVETELLQSLVTIIRQEGIEQPVRLLITGSLAEAMTDSLRDGQSGTQELAKELVMEVLADPNSAAAVQHLLMRPELAASLRGLVHPLLLLPFTKRESHRLLKQQLDWLMVRNPATEQSLGGLGQLLLRLASTRAAIASLLSWSLSPSGPLPPLVTDLTSDRLVPLLAPATTGALTGAVHEALEDEYIRELAKDTMKGLLLRVAKMHAAAAAAAAEARRREDAESREVAVKREEEEEGEGGHGAETEGGGGRAEDPEGEDAGERGPLKGDERGKEVLDLGRR 414
BLAST of EWM29825.1 vs. NCBI_GenBank
Match: gi|298704729|emb|CBJ28325.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.707 bits (169), Expect = 2.194e-9 Identity = 53/192 (27.60%), Postives = 94/192 (48.96%), Query Frame = 0
Query: 144 VTIIRQEGIEQPVRLLITGSLAEAMTDSLRDGQSGTQELAKELVMEVLADPNSAAAVQHLL----MRPELAASLRGLVHPLLLLPFTKRESHRLLKQQLDWLMVRNPATEQSLGGLGQLLLRLASTRAAIASLLSWSLSPSGPLPPLVTDLTSDR----LVPLLAPATTGALTGAVHEALEDEYIRELAKDT 327
+ I+++EG+ V++ + LA A + LR +S T+ AK+ +MEV+ +P + H+L P L+ +R L++ + L +T + S L + WL+ + L L+RL T A L++W++ G L P +S R +PL + T A+ A+ E L+ ++ E+AK T
Sbjct: 196 LAILKEEGM-HAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVMREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLIRWLLSETDWMDAEAAKLCAYLVRLEQTELATIWLVAWAIREPGILDP-----SSSRGLAASLPLGSQQITDAMVWALTETLKSDWALEMAKST 381 The following BLAST results are available for this feature:
BLAST of EWM29825.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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