EWM22182.1, cds8491 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|585102613|gb|EWM22182.1| (nadh dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 251.521 bits (641), Expect = 1.204e-84 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 Query: 1 MLRSSGSKLKTAFGRLAGDILRRGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKSGATGVPLSWS 125 MLRSSGSKLKTAFGRLAGDILRRGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKSGATGVPLSWS Sbjct: 1 MLRSSGSKLKTAFGRLAGDILRRGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKSGATGVPLSWS 125
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|298711911|emb|CBJ48598.1| (NUOF homolog, NADH dehydrogenase (ubiquinone) subunit [Ectocarpus siliculosus]) HSP 1 Score: 150.984 bits (380), Expect = 6.893e-41 Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 0 Query: 12 AFGRLAGDILRRGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 GR A + R +A+ AP +VYGGLKDQDRIFTNLYGE DWR+ A+KRGDWH TKEIMW GPDWIV+EMK SGLRGRGGAGFPSGLKWSFMPK + Sbjct: 22 VVGRSAAVLGRSLSAAPGAKEEAPEPPRVYGGLKDQDRIFTNLYGEQDWRVGDALKRGDWHQTKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNT 125
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|1214703825|gb|OWZ15775.1| (NADH dehydrogenase flavoprotein 1 [Phytophthora megakarya]) HSP 1 Score: 146.747 bits (369), Expect = 2.481e-39 Identity = 64/93 (68.82%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 23 RGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 R +A+ A PAM +VYGGLKD+DRIFTN+YGE WR+DGA++RGDWH TK+++ GPDWIV+E+K SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 19 RSSAAVANAVQEPAMARVYGGLKDEDRIFTNVYGEDTWRVDGALRRGDWHRTKDLLCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKQT 111
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|301111442|ref|XP_002904800.1| (NADH dehydrogenase flavoprotein 1, mitochondrial precursor [Phytophthora infestans T30-4] >gi|262095130|gb|EEY53182.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor [Phytophthora infestans T30-4]) HSP 1 Score: 146.362 bits (368), Expect = 3.177e-39 Identity = 64/93 (68.82%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 23 RGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 R +A+ A PAM +VYGGLKD+DRIFTN+YGE WR+DGA++RGDWH TK+++ GPDWIV+E+K SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 19 RTSAAVANAAEEPAMARVYGGLKDEDRIFTNVYGEDTWRVDGAVRRGDWHRTKDLLCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKQT 111
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|1173960825|gb|OQS06914.1| (NADH dehydrogenase flavoprotein 1, mitochondrial precursor [Thraustotheca clavata]) HSP 1 Score: 145.206 bits (365), Expect = 7.784e-39 Identity = 63/87 (72.41%), Postives = 77/87 (88.51%), Query Frame = 0 Query: 29 APPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 A PAMT++YGGLKD+DRIFTNLYGE WRI+GA+KRGDW+ TK++++ GPDWIV+E+K SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 24 ANAEETPAMTRIYGGLKDEDRIFTNLYGEQTWRIEGALKRGDWYRTKDLLYMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKQT 110
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|698809434|ref|XP_009837746.1| (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Aphanomyces astaci] >gi|574107447|gb|ETV72960.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Aphanomyces astaci]) HSP 1 Score: 145.206 bits (365), Expect = 9.636e-39 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 0 Query: 1 MLRSSGSKLKTAFGRLAGDILRRGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 + R+ KLK+ + APP +T+VYGGLKD+DRIFTNLYGE WR+DGA++RGDWH TK+++ GP+WI++E+K SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 7 LTRAVAQKLKSQVRLFQSSAVLNNVQGEAPP-----LTRVYGGLKDEDRIFTNLYGEQTWRVDGALRRGDWHRTKDLLCMGPEWIIQEIKDSGLRGRGGAGFPSGLKWSFMPKQT 116
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|566008922|gb|ETI31833.1| (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica P1569] >gi|567946408|gb|ETK72219.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica] >gi|567975100|gb|ETL25669.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica] >gi|568034480|gb|ETM32149.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica] >gi|570312601|gb|ETO60549.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica P1976] >gi|570936366|gb|ETP01623.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica CJ01A1]) HSP 1 Score: 144.05 bits (362), Expect = 2.277e-38 Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 23 RGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 R +A+ A PAM +VYGGLKD+DRIFTN+YGE WR+DGA++RGDW+ TK+++ GPDWIV+E+K SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 20 RTSAAVANAAEEPAMARVYGGLKDEDRIFTNVYGEDTWRVDGALRRGDWYRTKDLLCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKQT 112
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|669151874|ref|XP_008611499.1| (NADH dehydrogenase (ubiquinone) flavoprotein 1 [Saprolegnia diclina VS20] >gi|530736973|gb|EQC35215.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Saprolegnia diclina VS20]) HSP 1 Score: 144.05 bits (362), Expect = 2.314e-38 Identity = 63/82 (76.83%), Postives = 74/82 (90.24%), Query Frame = 0 Query: 34 APAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 PAMT+VYGGLKD+DRIFTNLYGE WRIDGA+KRGDW+ TK+ + GP+WI++EMK SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 35 TPAMTRVYGGLKDEDRIFTNLYGEQTWRIDGALKRGDWYRTKDFLNMGPEWIIQEMKDSGLRGRGGAGFPSGLKWSFMPKQT 116
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|675212031|ref|XP_008914900.1| (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica INRA-310] >gi|568004556|gb|ETL78876.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica] >gi|568084889|gb|ETM99809.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica INRA-310] >gi|570966684|gb|ETP29803.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Phytophthora parasitica P10297] >gi|970656736|gb|KUF94713.1| Tartrate-resistant acid phosphatase type 5 [Phytophthora nicotianae]) HSP 1 Score: 144.05 bits (362), Expect = 2.399e-38 Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 23 RGAASAAPPPAAPAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 R +A+ A PAM +VYGGLKD+DRIFTN+YGE WR+DGA++RGDW+ TK+++ GPDWIV+E+K SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 20 RTSAAVANAAEEPAMARVYGGLKDEDRIFTNVYGEDTWRVDGALRRGDWYRTKDLLCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKQT 112
BLAST of EWM22182.1 vs. NCBI_GenBank
Match: gi|325187212|emb|CCA21752.1| (ubiquinone oxidoreductase putative [Albugo laibachii Nc14]) HSP 1 Score: 144.05 bits (362), Expect = 2.798e-38 Identity = 62/81 (76.54%), Postives = 75/81 (92.59%), Query Frame = 0 Query: 35 PAMTKVYGGLKDQDRIFTNLYGEYDWRIDGAMKRGDWHMTKEIMWQGPDWIVEEMKKSGLRGRGGAGFPSGLKWSFMPKKS 115 PAMT+VYGGLKD+DRIFTNLYGE WRIDGA+KRGDW+ TK+++ GP+WI++E+K SGLRGRGGAGFPSGLKWSFMPK++ Sbjct: 36 PAMTRVYGGLKDEDRIFTNLYGEKTWRIDGALKRGDWYRTKDLLCMGPEWIIQEVKDSGLRGRGGAGFPSGLKWSFMPKQT 116 The following BLAST results are available for this feature:
BLAST of EWM22182.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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