EWM22194.1, cds8479 (CDS) Nannochloropsis gaditana

Overview
NameEWM22194.1
Unique Namecds8479
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:122614..122687 +
Alignment locationKK037249.1:122863..123169 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22194.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102777g1.9478.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:122614..122687 +
KK037249.1supercontigKK037249.1:122863..123169 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22194.1 vs. NCBI_GenBank
Match: gi|585102631|gb|EWM22194.1| (hypothetical protein Naga_102777g1 [Nannochloropsis gaditana])

HSP 1 Score: 225.713 bits (574), Expect = 2.479e-74
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 
Query:    1 MPHTTSSFRPRRSCARGACPKRIGSSALPTPMPSLPLARRLPPREDSFWSTPSTSLARYTPPLPPSLPPSLPPSFVSFLLFSPDFSPARTLKSPASCPSSVVSPLLPFPSSSPSIPPPPARLRTGK 126
            MPHTTSSFRPRRSCARGACPKRIGSSALPTPMPSLPLARRLPPREDSFWSTPSTSLARYTPPLPPSLPPSLPPSFVSFLLFSPDFSPARTLKSPASCPSSVVSPLLPFPSSSPSIPPPPARLRTGK
Sbjct:    1 MPHTTSSFRPRRSCARGACPKRIGSSALPTPMPSLPLARRLPPREDSFWSTPSTSLARYTPPLPPSLPPSLPPSFVSFLLFSPDFSPARTLKSPASCPSSVVSPLLPFPSSSPSIPPPPARLRTGK 126
The following BLAST results are available for this feature:
BLAST of EWM22194.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102631|gb|EWM22194.1|2.479e-74100.00hypothetical protein Naga_102777g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8506rna8506Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications