EWM22197.1, cds8474 (CDS) Nannochloropsis gaditana

Overview
NameEWM22197.1
Unique Namecds8474
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:115357..115944 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22197.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100621g3.6226.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:115357..115944 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22197.1 vs. NCBI_GenBank
Match: gi|585102636|gb|EWM22197.1| (hypothetical protein Naga_100621g3 [Nannochloropsis gaditana])

HSP 1 Score: 404.06 bits (1037), Expect = 1.077e-142
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 
Query:    1 MLTLQRIWHDSLLFLKGVFEYVICDAIHEYHYIFWGLRCLLLRGDTHPSLLYFLSTLCPQNPQLSAAMLHALVTAFLRAICQVFKFYTVQKVLNASISVVEAYPLAGSNNLANNERYEGKGGAKEGEEQDSQADTCQLASDTLSSLGTEDGKKGQGNEGGKVEGLEEEFIFQARSLNDVAHLQASGLVTSRSTAL 195
            MLTLQRIWHDSLLFLKGVFEYVICDAIHEYHYIFWGLRCLLLRGDTHPSLLYFLSTLCPQNPQLSAAMLHALVTAFLRAICQVFKFYTVQKVLNASISVVEAYPLAGSNNLANNERYEGKGGAKEGEEQDSQADTCQLASDTLSSLGTEDGKKGQGNEGGKVEGLEEEFIFQARSLNDVAHLQASGLVTSRSTAL
Sbjct:    1 MLTLQRIWHDSLLFLKGVFEYVICDAIHEYHYIFWGLRCLLLRGDTHPSLLYFLSTLCPQNPQLSAAMLHALVTAFLRAICQVFKFYTVQKVLNASISVVEAYPLAGSNNLANNERYEGKGGAKEGEEQDSQADTCQLASDTLSSLGTEDGKKGQGNEGGKVEGLEEEFIFQARSLNDVAHLQASGLVTSRSTAL 195
The following BLAST results are available for this feature:
BLAST of EWM22197.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102636|gb|EWM22197.1|1.077e-142100.00hypothetical protein Naga_100621g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8501rna8501Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications