EWM29812.1, cds846 (CDS) Nannochloropsis gaditana

Overview
NameEWM29812.1
Unique Namecds846
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:557544..557566 +
Alignment locationCM002456.1:557839..559138 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29812.1
Productlysophospholipase-like 1
Orig transcript idgnl|cribi|Naga_100017g37.310.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:557544..557566 +
CM002456.1supercontigCM002456.1:557839..559138 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR003140PLipase/COase/thioEstase
Homology
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|585112393|gb|EWM29812.1| (lysophospholipase-like 1 [Nannochloropsis gaditana])

HSP 1 Score: 912.524 bits (2357), Expect = 0.000e+0
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0
Query:    1 MNANNMTMPTRWAAVTAAALFSSSTTCWSSRPSSQPVRAKPTASSANSSDHRMSHTEKGALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAEGCMQEEMTRTSLSSLPGAPSPSSADLPSIATAAAQSASATFPSDEVHMTLEKADARQTQTQEQTEEKGKVAPCKYRAVFRVPQDRVQSFLDRPVSARGAHFSFAHGPTPGTVCTSFESTRPEETAKALLERVKSRVRDPDAPGGIDTCHPS 440
            MNANNMTMPTRWAAVTAAALFSSSTTCWSSRPSSQPVRAKPTASSANSSDHRMSHTEKGALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAEGCMQEEMTRTSLSSLPGAPSPSSADLPSIATAAAQSASATFPSDEVHMTLEKADARQTQTQEQTEEKGKVAPCKYRAVFRVPQDRVQSFLDRPVSARGAHFSFAHGPTPGTVCTSFESTRPEETAKALLERVKSRVRDPDAPGGIDTCHPS
Sbjct:    1 MNANNMTMPTRWAAVTAAALFSSSTTCWSSRPSSQPVRAKPTASSANSSDHRMSHTEKGALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAEGCMQEEMTRTSLSSLPGAPSPSSADLPSIATAAAQSASATFPSDEVHMTLEKADARQTQTQEQTEEKGKVAPCKYRAVFRVPQDRVQSFLDRPVSARGAHFSFAHGPTPGTVCTSFESTRPEETAKALLERVKSRVRDPDAPGGIDTCHPS 440          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|553190494|ref|XP_005855203.1| (lysophospholipase-like 1, partial [Nannochloropsis gaditana CCMP526] >gi|422293858|gb|EKU21158.1| lysophospholipase-like 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 892.878 bits (2306), Expect = 0.000e+0
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0
Query:    9 PTRWAAVTAAALFSSSTTCWSSRPSSQPVRAKPTASSANSSDHRMSHTEKGALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAEGCMQEEMTRTSLSSLPGAPSPSSADLPSIATAAAQSASATFPSDEVHMTLEKADARQTQTQEQTEEKGKVAPCKYRAVFRVPQDRVQSFLDRPVSARGAHFSFAHGPTPGTVCTSFESTRPEETAKALLERVKSRVRDPDAPGGIDTCHPS 440
            PTRWAAVTAAALFSSSTTCWSSRPSSQPVRAKPTASSANSSDHRMSHTEKGALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAEGCMQEEMTRTSLSSLPGAPSPSSADLPSIATAAAQSASATFPSDEVHMTLEKADARQTQTQEQTEEKGKVAPCKYRAVFRVPQDRVQSFLDRPVSARGAHFSFAHGPTPGTVCTSFESTRPEETAKALLERVKSRVRDPDAPGGIDTCHPS
Sbjct:    2 PTRWAAVTAAALFSSSTTCWSSRPSSQPVRAKPTASSANSSDHRMSHTEKGALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAEGCMQEEMTRTSLSSLPGAPSPSSADLPSIATAAAQSASATFPSDEVHMTLEKADARQTQTQEQTEEKGKVAPCKYRAVFRVPQDRVQSFLDRPVSARGAHFSFAHGPTPGTVCTSFESTRPEETAKALLERVKSRVRDPDAPGGIDTCHPS 433          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|513012127|ref|XP_004867450.1| (lysophospholipase-like protein 1 [Heterocephalus glaber])

HSP 1 Score: 143.665 bits (361), Expect = 1.682e-36
Identity = 89/232 (38.36%), Postives = 117/232 (50.43%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQR--TMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAE 289
            +LIFLHGSGD G  +   ++     Q +    I +  PTA PR YT   G LSNVWFDR+ +    PE    +D     L  LI++ E   GIS SRI LGGFSMGG MA+    R  + +AG+FA+ SFL   SAVYQ+ Q+    +P +   HG +D +V ++WGE T   L  C   N                FY FP + H   +  L  L  WI    +K P+  E
Sbjct:   24 SLIFLHGSGDSGQGLRSWIKQV-LNQDLTFQHIKIIYPTAPPRPYTPMRGGLSNVWFDRLKISADCPEHLESIDAMCQALTELIDE-EVCSGISKSRILLGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKMDGVLPELFQCHGMADELVLHSWGEETNSML-KCLGVN--------------TKFYSFPNVYHELSKTELETLKYWI---LKKLPEEME 235          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|1002595802|ref|XP_015676862.1| (PREDICTED: lysophospholipase-like protein 1 [Protobothrops mucrosquamatus])

HSP 1 Score: 141.354 bits (355), Expect = 8.228e-36
Identity = 87/229 (37.99%), Postives = 118/229 (51.53%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQ--QRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPD 286
            ++IFLHGSGD G  +   ++     Q ++   I V  PTA  R YT   G+LSNVWFDR  +    PE    +D     L SLI+  E + GI  +RI LGGFSMGGGMAL    R  + +AG+FA+ SFL  +SAVYQ+ +  +R +P +   HG +D +V Y+WGE T + L A                     F+  P L H   +  L  L  WI    +K P+
Sbjct:   23 SVIFLHGSGDTGQGVRDWIKQV-LKQDLSFQHIKVIYPTAPARPYTPMRGSLSNVWFDRYKISNDCPEHTETIDMMCQALNSLIDD-EVKNGIRKNRILLGGFSMGGGMALHLAYRHHQEVAGVFALSSFLNKNSAVYQALEKNERELPELFQCHGTADELVLYSWGEETNKTLKALGV---------------ITTFFSLPNLYHELSKSELEKLRSWI---LKKLPE 231          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|1032829034|ref|XP_003495047.2| (PREDICTED: lysophospholipase-like protein 1 isoform X1 [Cricetulus griseus])

HSP 1 Score: 140.969 bits (354), Expect = 1.309e-35
Identity = 83/222 (37.39%), Postives = 113/222 (50.90%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQ--RTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIET 279
            +LIFLHGSGD G  + + ++     Q +    I +  PTA  R YT   G LSNVWFDR  +    PE    +D     L  LI+  E + GI  +RI +GGFSMGG MA+    R+ + +AG+FA+ SFL  +SAVY+  QQ  RT+P +   HG  D +V +AWGE T  +L +                     F+  P L H  ++  L  L  WI T
Sbjct:   24 SLIFLHGSGDSGQGLRHWIKNM-LNQDLAFQHIKIIYPTAPSRPYTPMKGGLSNVWFDRFKISNDCPEHLESIDGMCQVLTELIDD-EVKNGIQKNRILIGGFSMGGCMAIHLAYRKHRDVAGVFALSSFLNKESAVYKDLQQAERTLPELFQCHGTVDELVLHAWGEETNSKLKSLGVS---------------TVFHSLPNLYHEMNKTELESLKSWILT 228          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|880948147|ref|XP_012977737.1| (lysophospholipase-like protein 1 [Mesocricetus auratus])

HSP 1 Score: 142.124 bits (357), Expect = 2.208e-35
Identity = 86/233 (36.91%), Postives = 116/233 (49.79%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQ--RTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFPDVAEG 290
            +LIFLHGSGD G  +   ++     Q +    I +  PTA  R YT   G LSNVWFDR  +    PE    +D     L  LI+  E + GI  +RI +GGFSMGG MA+    R+ + +AG+FA+ SFL  +SAVY+  QQ   T+P +   HG +D +V +AWGE T  +L +                     F+  P L H  ++  L  L  WI T   K P   EG
Sbjct:   79 SLIFLHGSGDSGQGLRQWIKNV-LNQDLTFQHIKIIYPTAPSRPYTPMKGGLSNVWFDRFKISSDCPEHLESIDGMCHVLTELIDG-EVKNGIQKNRILIGGFSMGGCMAIHLAYRKHRDVAGVFALSSFLNKESAVYKDLQQAEHTLPELFQCHGTADELVLHAWGEETNSKLKSLGVS---------------TVFHSLPDLYHEMNKTELERLKSWILT---KLPGKTEG 291          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|562820705|ref|XP_006140291.1| (PREDICTED: lysophospholipase-like protein 1 isoform X1 [Tupaia chinensis] >gi|562820707|ref|XP_006140292.1| PREDICTED: lysophospholipase-like protein 1 isoform X2 [Tupaia chinensis])

HSP 1 Score: 140.198 bits (352), Expect = 3.168e-35
Identity = 82/222 (36.94%), Postives = 113/222 (50.90%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQR--TMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIET 279
            +LIFLHGSGD G  +   ++     Q +    I +  PTA PR YT   G +SNVWFDR  +    PE    +D     L  LI+  E + GI  +RI +GGFSMGG MA+    R  + +AG+FA+ SFL   SAVYQ+ Q+    +P +   HG +D +V ++WGE T   L +                  R  F+ FP + H  ++R L  L  WI T
Sbjct:   24 SLIFLHGSGDSGQGLRAWIKQV-LNQDLTFQHIKIIYPTAPPRPYTPIKGRISNVWFDRFKISHDCPEHLESIDTMCQVLTDLIDS-EVKSGIQKNRILIGGFSMGGCMAMHLAYRNHQNVAGVFALSSFLNKASAVYQALQKSDGELPELFQCHGTADELVLHSWGEETNSMLKSLGV---------------RTKFHSFPNVYHELNKRELEKLKSWILT 228          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|929446080|ref|XP_014119906.1| (PREDICTED: lysophospholipase-like protein 1 [Zonotrichia albicollis])

HSP 1 Score: 139.813 bits (351), Expect = 3.452e-35
Identity = 87/220 (39.55%), Postives = 110/220 (50.00%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQ--QRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWI 277
            +LIFLHGSGD G   A A       Q M    I V  PTA  R YT   GA SNVWFDR  +    PE    +D     L  LI   E   GI+ SRI +GGFSMGGGMA+    R  + LAG+FA+ SFL  DSAVYQ+ +  +R +P +   HG +D +V Y+WGE T + L +                    + + FP L H  +   +  L  WI
Sbjct:   21 SLIFLHGSGDTGQG-ARAWIKQILNQDMAFQHIKVIYPTAPARPYTPMKGAFSNVWFDRYKICNDCPEHIESIDSMCRGLTDLIND-EVNNGIAKSRILIGGFSMGGGMAMHLAFRFHQDLAGVFALSSFLNKDSAVYQALKRNERALPELFQCHGTADNLVLYSWGEETNKMLKSLGVS---------------TSLHTFPNLNHELNRTEIEKLKSWI 223          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|731508365|ref|XP_010597718.1| (PREDICTED: lysophospholipase-like protein 1 [Loxodonta africana])

HSP 1 Score: 139.813 bits (351), Expect = 3.621e-35
Identity = 85/220 (38.64%), Postives = 113/220 (51.36%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQSPQQR--TMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWI 277
            +LIFLHGSGD G  +   ++    TQ +    I V  PTA  R YT  SG LSNVWFDR  + I  PE    +D     L  LI+  E + GI ++RI +GGFSMGG MA+    R  + +AG+FA+ SFL   SAVYQ+ Q+    +P +   HG +D +VPY+WGE T   L +                     F+ FP + H   +  L  L  WI
Sbjct:   22 SLIFLHGSGDTGQGLRTWIKQV-LTQDLAFQHIKVIYPTAPFRPYTPMSGGLSNVWFDRFKISIDCPEHLESIDVMCQVLADLIDG-EVKSGIKNNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKTSAVYQALQKADGVLPELFQCHGTADELVPYSWGEETNSVLRSLGVST---------------QFHSFPGVHHDLSKAELEKLTSWI 224          
BLAST of EWM29812.1 vs. NCBI_GenBank
Match: gi|699660260|ref|XP_009898376.1| (PREDICTED: lysophospholipase-like protein 1 [Picoides pubescens])

HSP 1 Score: 139.428 bits (350), Expect = 4.571e-35
Identity = 89/233 (38.20%), Postives = 117/233 (50.21%), Query Frame = 0
Query:   60 ALIFLHGSGDDGGNMAYALRATGFTQRMNALGISVHCPTAKPRRYTYASGALSNVWFDRVDLDISAPEDKAGMDDSFAELMSLIEKLENEQGISSSRIYLGGFSMGGGMALATLARETKVLAGIFAIGSFLASDSAVYQS--PQQRTMPRILLAHGQSDAVVPYAWGEATARRLYACSQENFGGDKEKGHGEEDRVAFYGFPRLQHTFDERVLSVLARWIETGAQKFP-DVAE 289
            +LIFLHGSGD G      ++     Q M+   I +  PTA  R YT   GALS VWFDR  +    PE    +D     L  LI   E + GI+ +RI +GGFSMGGGMA+    R  + LAG+FA+ SFL  DSAVYQ+    Q  +P +   HG +D +V Y+WGE T + L +                    + + FP L H      +  L  WI   A+K P +VAE
Sbjct:   21 SLIFLHGSGDTGLGARTWIKQI-LNQDMSFQHIKIIYPTAPSRPYTPMRGALSTVWFDRYKISNDVPEHIESIDSMCQTLTHLIND-EIKNGIAKNRILIGGFSMGGGMAMHLAYRFHQDLAGVFALSSFLNKDSAVYQALKKNQNVLPELFQCHGTADDLVLYSWGEETNKMLQSLGVT---------------ASLHTFPNLYHELSRAEIEELKSWI---AKKLPVEVAE 233          
The following BLAST results are available for this feature:
BLAST of EWM29812.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112393|gb|EWM29812.1|0.000e+0100.00lysophospholipase-like 1 [Nannochloropsis gaditana... [more]
gi|553190494|ref|XP_005855203.1|0.000e+0100.00lysophospholipase-like 1, partial [Nannochloropsis... [more]
gi|513012127|ref|XP_004867450.1|1.682e-3638.36lysophospholipase-like protein 1 [Heterocephalus g... [more]
gi|1002595802|ref|XP_015676862.1|8.228e-3637.99PREDICTED: lysophospholipase-like protein 1 [Proto... [more]
gi|1032829034|ref|XP_003495047.2|1.309e-3537.39PREDICTED: lysophospholipase-like protein 1 isofor... [more]
gi|880948147|ref|XP_012977737.1|2.208e-3536.91lysophospholipase-like protein 1 [Mesocricetus aur... [more]
gi|562820705|ref|XP_006140291.1|3.168e-3536.94PREDICTED: lysophospholipase-like protein 1 isofor... [more]
gi|929446080|ref|XP_014119906.1|3.452e-3539.55PREDICTED: lysophospholipase-like protein 1 [Zonot... [more]
gi|731508365|ref|XP_010597718.1|3.621e-3538.64PREDICTED: lysophospholipase-like protein 1 [Loxod... [more]
gi|699660260|ref|XP_009898376.1|4.571e-3538.20PREDICTED: lysophospholipase-like protein 1 [Picoi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna846rna846Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications