EWM22212.1, cds8456 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|585102660|gb|EWM22212.1| (hypothetical protein Naga_100337g6 [Nannochloropsis gaditana]) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
Query: 1 MLQGRWKAPRRGPLNLLFGCLLLCMGIRLQPTHAEGHETVFVPGIWLDDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKVRVMASAVGRRSGGGTCRGRLVFPTLWRKKSLLR 249
MLQGRWKAPRRGPLNLLFGCLLLCMGIRLQPTHAEGHETVFVPGIWLDDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKVRVMASAVGRRSGGGTCRGRLVFPTLWRKKSLLR
Sbjct: 1 MLQGRWKAPRRGPLNLLFGCLLLCMGIRLQPTHAEGHETVFVPGIWLDDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKVRVMASAVGRRSGGGTCRGRLVFPTLWRKKSLLR 249
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|553183641|ref|XP_005853933.1| (pectinacetylesterase family protein [Nannochloropsis gaditana CCMP526] >gi|422295123|gb|EKU22422.1| pectinacetylesterase family protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 295.049 bits (754), Expect = 6.812e-98 Identity = 149/164 (90.85%), Postives = 152/164 (92.68%), Query Frame = 0
Query: 89 HECYD---RAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKVRVMASAVGRRSGGGTCRGRLVFPTLWRKKSLLR 249
HE D RA TH GS + ++ALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKVRVMASAVGRRSGGGTCRGRLVFPTLWRKKSLLR
Sbjct: 82 HEEVDGGLRAYTH-GSRPAFP-SVALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKVRVMASAVGRRSGGGTCRGRLVFPTLWRKKSLLR 243
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|553186472|ref|XP_005854426.1| (pectinacetylesterase family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294639|gb|EKU21939.1| pectinacetylesterase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 213.386 bits (542), Expect = 7.811e-68 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query: 115 MVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRK 215
MVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRK
Sbjct: 1 MVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRK 101
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|1191033422|ref|XP_020893796.1| (palmitoleoyl-protein carboxylesterase NOTUM-like [Exaiptasia pallida]) HSP 1 Score: 142.895 bits (359), Expect = 3.147e-35 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 0
Query: 48 DDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDY 202
D + A CLDGS P +++R G G G +KWI++ +GG WC K +CY+R++++LGSS + + +E ++S D ++NP ++WNVV+V YCDG ++G E+ D ++FRGK I ++M DL + G++ E +VF+G SAG + L DY
Sbjct: 395 DQKGAVCLDGSTPGFFYRQGLGSGQKKWIIYLQGGAWCHSKMDCYERSQSNLGSSLKFNTLINVE-GLLSRDFKSNPHFYDWNVVYVPYCDGASYTGNRTKPVEIKDKMIYFRGKRILSSLMDDLLGY-GMNDAENVVFSGTSAGGLAVLLHADY 547
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|999988823|gb|KXJ27891.1| (Pectin acetylesterase 5 [Exaiptasia pallida]) HSP 1 Score: 142.895 bits (359), Expect = 3.231e-35 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 0
Query: 48 DDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDY 202
D + A CLDGS P +++R G G G +KWI++ +GG WC K +CY+R++++LGSS + + +E ++S D ++NP ++WNVV+V YCDG ++G E+ D ++FRGK I ++M DL + G++ E +VF+G SAG + L DY
Sbjct: 406 DQKGAVCLDGSTPGFFYRQGLGSGQKKWIIYLQGGAWCHSKMDCYERSQSNLGSSLKFNTLINVE-GLLSRDFKSNPHFYDWNVVYVPYCDGASYTGNRTKPVEIKDKMIYFRGKRILSSLMDDLLGY-GMNDAENVVFSGTSAGGLAVLLHADY 558
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|919070123|ref|XP_013416559.1| (PREDICTED: pectin acetylesterase 5-like isoform X2 [Lingula anatina] >gi|919070125|ref|XP_013416560.1| PREDICTED: pectin acetylesterase 5-like isoform X2 [Lingula anatina]) HSP 1 Score: 137.117 bits (344), Expect = 2.541e-34 Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 0
Query: 14 LNLLFGCLLLCMGIRLQPTHAEGH-------ETVFVPGIWLDDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIR 214
++L+ +LL + L+PT H E V VP + + RA CLDGS P +Y R G+ G R WIL+ E GGWCA +CY+R+KTHLGSS T ++SSDP++NP H WN+V + YCDG ++G+ + + +L+F+G I + +M L + L ++ G SAG + +L D+ + +P S+
Sbjct: 44 ISLVVLVILLRALLNLRPTFISFHVASDIDGELVVVPKDFAEARRAACLDGSPPGFYIRKGFHVGKRDWILYLEPGGWCATLKDCYERSKTHLGSSEVAPSTKEFN-GILSSDPKSNPTFHMWNMVSLLYCDGGSYAGSMANPVLYNGNKLYFQGFHILQTLMDFLIETTDLGHARRVILVGSSAGGLATFLHADFMKSK--LPQSVN 248
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|919070121|ref|XP_013416558.1| (PREDICTED: pectin acetylesterase 5-like isoform X1 [Lingula anatina]) HSP 1 Score: 137.117 bits (344), Expect = 4.083e-34 Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 0
Query: 14 LNLLFGCLLLCMGIRLQPTHAEGH-------ETVFVPGIWLDDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIR 214
++L+ +LL + L+PT H E V VP + + RA CLDGS P +Y R G+ G R WIL+ E GGWCA +CY+R+KTHLGSS T ++SSDP++NP H WN+V + YCDG ++G+ + + +L+F+G I + +M L + L ++ G SAG + +L D+ + +P S+
Sbjct: 68 ISLVVLVILLRALLNLRPTFISFHVASDIDGELVVVPKDFAEARRAACLDGSPPGFYIRKGFHVGKRDWILYLEPGGWCATLKDCYERSKTHLGSSEVAPSTKEFN-GILSSDPKSNPTFHMWNMVSLLYCDGGSYAGSMANPVLYNGNKLYFQGFHILQTLMDFLIETTDLGHARRVILVGSSAGGLATFLHADFMKSK--LPQSVN 272
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|1133465696|ref|XP_011404609.2| (PREDICTED: pectin acetylesterase 8-like [Amphimedon queenslandica]) HSP 1 Score: 134.035 bits (336), Expect = 1.742e-33 Identity = 65/167 (38.92%), Postives = 96/167 (57.49%), Query Frame = 0
Query: 48 DDERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIR 214
D A CLDGS P YY+RPG G A WIL EGGGWC ++ C DR+K LGSS + T + +S + E NP + WNVVF+KYCDG ++G + + ++FRG I + I++ + D G+ +E++ GCSAG + Y+ +Y L+ P+++
Sbjct: 38 DSGEAVCLDGSPPGYYYRPGVGADANNWILHLEGGGWCPNEDNCLDRSKGTLGSSKNWTQTTSFS-GFLSDEQEYNPDFYQWNVVFLKYCDGASFAGYVAEPVNVKGTNIYFRGFKILQLILQSVMD-KGMSNAKEVILTGCSAGGLATYIHTNY--VKSLLSPTVK 200
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|727412241|ref|XP_010472663.1| (PREDICTED: pectin acetylesterase 4-like [Camelina sativa]) HSP 1 Score: 132.109 bits (331), Expect = 1.203e-32 Identity = 67/155 (43.23%), Postives = 94/155 (60.65%), Query Frame = 0
Query: 49 DERAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMALEWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYW 203
D A CLDGS P Y+ G G G++ W+LF EGGGWC C RA T LGSS+ ++D +A ++SSDP NP NWN V ++YCDG ++G + E ++ RL FRG+ I EAIM +L MG+ + ++ + GCSAG + + DY+
Sbjct: 55 DRGAFCLDGSLPGYHFHKGSGSGSKSWLLFLEGGGWCRTIESCSSRAMTSLGSSNYFKDEVAF-LGVLSSDPSQNPDFFNWNRVNIRYCDGASFAGHP-EAEVKNETRLFFRGQLIWEAIMDELLS-MGMSRAKQAILTGCSAGGLATLIHCDYF 206
BLAST of EWM22212.1 vs. NCBI_GenBank
Match: gi|1133469528|ref|XP_019854868.1| (PREDICTED: pectin acetylesterase 5-like [Amphimedon queenslandica]) HSP 1 Score: 130.183 bits (326), Expect = 4.760e-32 Identity = 66/173 (38.15%), Postives = 96/173 (55.49%), Query Frame = 0
Query: 51 RAKCLDGSKPVYYHRPGWGDGARKWILFYEGGGWCADKHECYDRAKTHLGSSHTYEDTMAL-EWDMVSSDPETNPGLHNWNVVFVKYCDGNFWSGATMDTEEMHDLRLHFRGKFIQEAIMRDLTDFMGLDKGEELVFAGCSAGAMIAYLQVDYWAASGLIPPSIRKVRVMASA 222
A CLDGS P YY R G+G G W++ +GG WC +K +C R++++LGSS + M M S E NP +NWN+ V+YCDG ++G ++H ++FRG I +AI++ L G+ +E + GCSAG + YL DY L PPS+ K R ++ A
Sbjct: 33 EAVCLDGSPPGYYFRKGFGSGVNSWVVHLQGGAWCYNKKDCLARSRSYLGSSRDWPQIMIFNNAGMFSDSKEKNPDFYNWNMAQVQYCDGASFAGYVEKPVKVHGTDIYFRGFKILQAIIQSLMS-KGMKNAQEFILTGCSAGGLATYLHADY--IRSLFPPSV-KYRAISDA 201 The following BLAST results are available for this feature:
BLAST of EWM22212.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|