EWM22225.1, cds8451 (CDS) Nannochloropsis gaditana

Overview
NameEWM22225.1
Unique Namecds8451
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:59531..59616 +
Alignment locationKK037249.1:59705..59807 +
Alignment locationKK037249.1:59912..60196 +
Alignment locationKK037249.1:60514..60643 +

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Properties
Property NameValue
End range.
End range60643
Protein idEWM22225.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100312g10.9861.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:59531..59616 +
KK037249.1supercontigKK037249.1:59705..59807 +
KK037249.1supercontigKK037249.1:59912..60196 +
KK037249.1supercontigKK037249.1:60514..60643 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22225.1 vs. NCBI_GenBank
Match: gi|585102676|gb|EWM22225.1| (hypothetical protein Naga_100312g10, partial [Nannochloropsis gaditana])

HSP 1 Score: 401.749 bits (1031), Expect = 1.403e-141
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 
Query:    1 MQGEGVGGEDGLRAGRDNDDGSEIGLGASGRRLMSKNEYYEQVAALDLNFALDNPLYADKEIHIVHAEDHWHWLKLARREETEEEEEEDEKQADEEEEENKEEKASNGEREREGGRKRWGRDDGFGRDQGETHSRRYKRRRLGLPHRGDLRPPLRKVKVVSATLASRSRFFKSLFEQPFSENGGQVIYLTAHDEEGGSRRA 201
            MQGEGVGGEDGLRAGRDNDDGSEIGLGASGRRLMSKNEYYEQVAALDLNFALDNPLYADKEIHIVHAEDHWHWLKLARREETEEEEEEDEKQADEEEEENKEEKASNGEREREGGRKRWGRDDGFGRDQGETHSRRYKRRRLGLPHRGDLRPPLRKVKVVSATLASRSRFFKSLFEQPFSENGGQVIYLTAHDEEGGSRRA
Sbjct:    1 MQGEGVGGEDGLRAGRDNDDGSEIGLGASGRRLMSKNEYYEQVAALDLNFALDNPLYADKEIHIVHAEDHWHWLKLARREETEEEEEEDEKQADEEEEENKEEKASNGEREREGGRKRWGRDDGFGRDQGETHSRRYKRRRLGLPHRGDLRPPLRKVKVVSATLASRSRFFKSLFEQPFSENGGQVIYLTAHDEEGGSRRA 201
[Close]
BLAST of EWM22225.1 vs. NCBI_GenBank
Match: gi|553186461|ref|XP_005854423.1| (hypothetical protein NGA_0235600, partial [Nannochloropsis gaditana CCMP526] >gi|422294636|gb|EKU21936.1| hypothetical protein NGA_0235600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 173.326 bits (438), Expect = 5.234e-53
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 
Query:    1 MQGEGVGGEDGLRAGRDNDDGSEIGLGASGRRLMSKNEYYEQVAALDLNFALDNPLYADKEIHIVHAEDHWHWLKLARREETEE 84
            MQGEGVGGEDGLRAGRDNDDGSEIGLGASGRRLMSKNEYYEQVAALDLNFALDNPLYADKEIHIVHAEDHWHWLKLARREETEE
Sbjct:    1 MQGEGVGGEDGLRAGRDNDDGSEIGLGASGRRLMSKNEYYEQVAALDLNFALDNPLYADKEIHIVHAEDHWHWLKLARREETEE 84
The following BLAST results are available for this feature:
BLAST of EWM22225.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102676|gb|EWM22225.1|1.403e-141100.00hypothetical protein Naga_100312g10, partial [Nann... [more]
gi|553186461|ref|XP_005854423.1|5.234e-53100.00hypothetical protein NGA_0235600, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8478rna8478Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications