EWM22231.1, cds8442 (CDS) Nannochloropsis gaditana

Overview
NameEWM22231.1
Unique Namecds8442
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:38477..38838 +
Alignment locationKK037249.1:38888..39011 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22231.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100724g4.3076.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:38477..38838 +
KK037249.1supercontigKK037249.1:38888..39011 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22231.1 vs. NCBI_GenBank
Match: gi|585102683|gb|EWM22231.1| (hypothetical protein Naga_100724g4 [Nannochloropsis gaditana])

HSP 1 Score: 330.872 bits (847), Expect = 8.805e-115
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 
Query:    1 MGFGLLLLTQKEDSSARGRELRGRRGVLIDVTQEALRSIECVLGAPMQPNQGDGGDGILLQEGQDVRRTFDGGQNGSEATNLSGRDELMHKVWSVGRGSILFSNLQSPGTRAFMERWILNCGASWPVNNICKRNVLKIFLEVHWSKKNHWKCFIRNFTRHI 161
            MGFGLLLLTQKEDSSARGRELRGRRGVLIDVTQEALRSIECVLGAPMQPNQGDGGDGILLQEGQDVRRTFDGGQNGSEATNLSGRDELMHKVWSVGRGSILFSNLQSPGTRAFMERWILNCGASWPVNNICKRNVLKIFLEVHWSKKNHWKCFIRNFTRHI
Sbjct:    1 MGFGLLLLTQKEDSSARGRELRGRRGVLIDVTQEALRSIECVLGAPMQPNQGDGGDGILLQEGQDVRRTFDGGQNGSEATNLSGRDELMHKVWSVGRGSILFSNLQSPGTRAFMERWILNCGASWPVNNICKRNVLKIFLEVHWSKKNHWKCFIRNFTRHI 161
The following BLAST results are available for this feature:
BLAST of EWM22231.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102683|gb|EWM22231.1|8.805e-115100.00hypothetical protein Naga_100724g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8469rna8469Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications