EWM30567.1, cds84 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|585113234|gb|EWM30567.1| (tubulin--tyrosine ligase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1449.11 bits (3750), Expect = 0.000e+0 Identity = 698/698 (100.00%), Postives = 698/698 (100.00%), Query Frame = 0
Query: 1 MDASATSSPPPSSFLDRHRKQLESVGFPPTLYSRLESKLVGETFDAGDTFGVVEDESQRRAVVCSAANGLEPQCDVWLIDHLYSFQVETYRQDLQKRPELLSRLAVMMGLEEPHEDGIFEEETPETSMEKNPIPPLASVPTPGLRAEKRPDSLNLNEETLCLRRPHRRERPTLYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAGYTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDADFYNKAFGIIFRGEEYEDFRQL 698
MDASATSSPPPSSFLDRHRKQLESVGFPPTLYSRLESKLVGETFDAGDTFGVVEDESQRRAVVCSAANGLEPQCDVWLIDHLYSFQVETYRQDLQKRPELLSRLAVMMGLEEPHEDGIFEEETPETSMEKNPIPPLASVPTPGLRAEKRPDSLNLNEETLCLRRPHRRERPTLYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAGYTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDADFYNKAFGIIFRGEEYEDFRQL
Sbjct: 1 MDASATSSPPPSSFLDRHRKQLESVGFPPTLYSRLESKLVGETFDAGDTFGVVEDESQRRAVVCSAANGLEPQCDVWLIDHLYSFQVETYRQDLQKRPELLSRLAVMMGLEEPHEDGIFEEETPETSMEKNPIPPLASVPTPGLRAEKRPDSLNLNEETLCLRRPHRRERPTLYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAGYTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDADFYNKAFGIIFRGEEYEDFRQL 698
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|659100091|ref|XP_008450923.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Cucumis melo]) HSP 1 Score: 291.967 bits (746), Expect = 1.480e-83 Identity = 190/573 (33.16%), Postives = 294/573 (51.31%), Query Frame = 0
Query: 133 IPPLASVPTPGLRAEKRPDS-LNLNEETLCLRRPHRRERPTLYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAGYTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFS--FYGVDVMVTKDLQPKILECTFGPDCASALKLDA------------DFYNKAFGIIFRGE 690
+P L+++ G+ EK S ++ + L R P TL ++V +W+Y+ +YRL D + +VW+V DE GSA +H+ NFR++PF+ F P G+L A+ +++ WPI N+ +G+ECT DY FG E+K +R+ RL WF P + H K + N SK + P + + + LRVY DN QV L+R + ++P EAD++W I R+ G+ V+Q + CLV KH L T +A G WL TYN+ET + I +Y R R G L+ L+ILKPWN+ R++D+ V D+L ++L +T PK+ +Y+ A N +KFD+RY + VR+ +PLEIF + VR++N+PYSL +++ +++ HFTVM+Y G + DF+ FE+++ V W ++ S+V +I+++FE+AA++ E+ FS YG+DVM+ QPK+LE T+ PDC A K D +FYN FG +F E
Sbjct: 354 LPNLSNLN--GIDVEKILSSGKHMIDSMLLPRLPEWAPEETLPDRVINAMWQYLMTYRLADE-EKIDETSVWYVMDELGSALRHSDEP--NFRVAPFL-FMPEGNLTSAISFTILWPIHNVQKGDECTRDYLFGIG---------EDK-----QRSARLTAWFHTPQNY-----FVHEYEKHI-------KNLQSKVLTSPISQTTSKTEELRQSKGGTLRVYTDNPQVEEFLNRPEFTITSDPKEADIIWT-SMQIDEDTRKATGITDKQYVNQFPFEACLVMKHHLAETIEKAHGCPEWLQPTYNLETHLSQLIGDYFVRK----RDG-----------------LNNLWILKPWNMARTIDTTVTDNLSAIIRLMETGPKICQKYIEHPALFNGKKFDLRYIVLVRSMKPLEIFLADSFWVRLANNPYSLEKQSLFEYETHFTVMNYRGRLNHK-NIADFVREFEQEH-NVKWLDIHSRVTSMIRSVFESAAVV------HPEMHSPFSRAMYGLDVMLDSSFQPKLLEVTYCPDCTRACKYDVENVFGGGVIEGREFYNYIFGCLFLNE 864
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|449452568|ref|XP_004144031.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Cucumis sativus] >gi|700211204|gb|KGN66300.1| hypothetical protein Csa_1G596500 [Cucumis sativus]) HSP 1 Score: 291.197 bits (744), Expect = 3.250e-83 Identity = 181/542 (33.39%), Postives = 278/542 (51.29%), Query Frame = 0
Query: 163 RRPHRRERPTLYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAGYTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFS--FYGVDVMVTKDLQPKILECTFGPDCASALKLDAD------------FYNKAFGIIFRGE 690
R P TL ++V +W+Y+ +YRL D + +VW+V DE GSA +H+ NFR++PF+ F P G+L A+ +++ WPI N+ +G+ECT DY FG E+K +R+ RL WF P + H K + N SK + P + + + LRVY DN QV L+R + ++P EAD++W I R+ G+ V+Q + CLV KH L T +A G WL TYN+ET + I +Y R + L+ L+ILKPWN+ R++D+ V D+L ++L +T PK+ +Y+ A N +KFD+RY + VR+ +PLEIF + VR++N+PYSL +++ +++ HFTVM+Y G + DF+ FE+++ V W ++ S+V +I+++FE+AA++ E+ FS YG+DVM+ QPK+LE T+ PDC A K D + FYN FG +F E
Sbjct: 387 RLPEWAPEETLPDRVINAMWQYLMTYRLADE-EKIDETSVWYVMDELGSALRHSDEP--NFRVAPFL-FMPEGNLMSAISFTILWPIHNVQKGDECTRDYLFGIG---------EDK-----QRSARLTAWFHTPQNY-----FVHEYEKHI-------KNLQSKVLTSPISQTTSKTEELCQSKGGTLRVYTDNPQVEEFLNRPEFTITSDPKEADIIWT-SMQIDEDTRKATGITDKQYVNQFPFEACLVMKHHLAETIEKAHGCPEWLQPTYNLETHLSQLIGDYFVRKRDR---------------------LNNLWILKPWNMARTIDTTVTDNLSAIIRLMETGPKICQKYIEHPALFNGKKFDLRYIVLVRSMKPLEIFLADSFWVRLANNPYSLEKQSLFEYETHFTVMNYRGRLNHK-NIADFVREFEQEH-NVKWLDIHSRVRSMIRSVFESAAVV------HPEMHSPFSRAMYGLDVMLDSSFQPKLLEVTYCPDCTRACKYDVENVFGGEIIKGEGFYNYIFGCLFLNE 868
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|1026061266|ref|XP_016575081.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Capsicum annuum]) HSP 1 Score: 286.189 bits (731), Expect = 1.556e-81 Identity = 179/534 (33.52%), Postives = 278/534 (52.06%), Query Frame = 0
Query: 173 LYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAG---YTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDA-------------DFYNKAFGIIFRGE 690
L ++V +W Y+ +YRL D + +VW+V DE GSA +H+ NFR+SPF+Y P G+L A+ YS+ WPI ++ EG+ECT DY FG EEK +R+ RL WF P R F + + K S+ ++ P+ P +++ S R LRVY D QV +L+R + EP +AD++W I ++ G+ + ++Q + CLV KH L T +A G WL TYN+ET+ + I ++ R E L L+ILKPWN+ R++D+ + +L ++L +T PK++ +Y+ A +N RKFD+RY + VR+ PLEIF + VR++N+ Y+L + ++++ HFTVM+Y G + TP DF++ FE+++ V W ++ S++ +IK+ F+ AA + E ++S + YGVDVM+ QPK+LE T+ PDC A+ D DFYN FG +F E
Sbjct: 388 LTDRVINAMWLYLMTYRLADE-EKIDETSVWYVMDELGSALRHSDKP--NFRVSPFLYMPE-GNLASAVSYSILWPIDDVREGDECTRDYLFGIG---------EEK-----QRSARLTAWFHTP---RNYFVKEYEKYKNKLQSIKIA-----SPI--PGSSIT---SSPCRGDGRALRVYADIPQVEEYLTRPEFVITTEPKDADIIWT-SMQIDEETKKTTGINDEQYINQFPFEACLVMKHHLAETIQKAHGLVEWLQPTYNLETQLSQLIGDFHLRESEK---------------------LDNLWILKPWNMARTIDTTITSNLSAIIRLMETGPKISQKYIEHPALLNGRKFDLRYIVLVRSMNPLEIFLAEVFWVRLANNTYTLEKHSFDEYETHFTVMNYRGRLNHMNTP----DFVKEFEKEH-EVNWQDIHSRIRNMIKSAFKAAAAVHPEM----HHSKSRAMYGVDVMLDCHFQPKLLEITYCPDCTRAVTYDTEAVVGGGETVKGKDFYNYIFGCLFLNE 859
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|661893276|emb|CDP03085.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 286.189 bits (731), Expect = 2.104e-81 Identity = 185/529 (34.97%), Postives = 277/529 (52.36%), Query Frame = 0
Query: 175 EQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAGYTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLD-------------ADFYNKAFGIIFRGE 690
++V +W ++ +YRL D + +VW+V DE GSA +H+ NF +SPF+Y P G L A+ YS+ WPIANI G+ECT D+ FG EEK +R+ RL WF P + + E+++L L S PV ST A + S LRVY D QV L+R + +EP +AD++W + R+ GL ++Q + CLV KH L T +A GS WL TYN+ETE I +Y R E L+ L+ILKPWN+ R++D+ V +L ++L +T PKV +Y+ A +N RKFD+RY + VR+ PLEIF + VR++N+ YSL ++ +++ HFTVM+Y G ++ ++F++ FE+++ V W ++ S+V ++I+++FE+AA + E + S + YGVDVM+ + QPKILE T+ PDC A K D +DF+N FG +F E
Sbjct: 400 DRVISAMWLFLMTYRLADE-EKVDETSVWYVMDELGSALRHSDEP--NFSVSPFLYLP-GGDLASAVSYSIVWPIANIERGDECTRDFLFGIG---------EEK-----QRSARLTAWFHTPQN----YFIREYEKQRLKLQ---SKKFHPLPVVS-STTKALYGSDG-----TALRVYTDIPQVEEFLTRPEFIITSEPKDADIIWT-SMQVDEEMRKAVGLNEQQFINQFPFEACLVMKHHLAETIQKAHGSPEWLQPTYNLETELTQLIGDYCIRERER---------------------LNNLWILKPWNMARTIDTTVTGNLSAIIRLMETGPKVCQKYIEHPALLNGRKFDIRYIVLVRSMNPLEIFLADTFWVRLANNTYSLDKHSLFEYETHFTVMNYRGRLNH-MNTSEFVKEFEKEH-HVNWMDIHSRVSRMIRSIFESAAAVHPEM----QSPTSRAIYGVDVMLDRHFQPKILEVTYCPDCTRACKYDTEPVIRAGGFVKGSDFFNYVFGCLFLNE 869
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|698571254|ref|XP_009774830.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Nicotiana sylvestris]) HSP 1 Score: 285.034 bits (728), Expect = 4.371e-81 Identity = 182/535 (34.02%), Postives = 274/535 (51.21%), Query Frame = 0
Query: 173 LYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALA-AHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAG---YTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDA-------------DFYNKAFGIIFRGE 690
L ++V +W Y+ +YRL D + +VW+V DE GSA +H+ NFR+SPF+Y P G+L A+ YS+ WPI ++ EG+ECT DY FG EEK +R+ RL WF P R F + + K S N PV S ++ H S LRVY D V +L+R + EP +AD++W I ++ GL + ++Q + CLV KH L T +A G WL TYN+ET+ I ++ +R E L L+ILKPWN+ R++D+ + +L ++L +T PK+ +Y+ A RKFD+RY + VR+ PLEIF + VR++N+ Y+L + ++++ HFTVM+Y G + TP DF++ FE+++ V W ++ S++ ++IK+ FE AA++ E ++S + YGVDVM+ QPK+LE T+ PDC A+K D DFYN FG +F E
Sbjct: 382 LEDRVINAMWLYLMTYRLADE-EKIDETSVWYVMDELGSALRHSDKP--NFRVSPFLYMP-EGNLASAVSYSIIWPIDDVREGDECTRDYLFGIG---------EEK-----QRSARLTAWFHTP---RNYFIKEYEKYKNKLQS-----NKFVSPVQGSSVTISLCHGDGS------ALRVYTDIPPVEEYLTRPEFVITTEPKDADIIWT-SMQIDEETKKAAGLNDEQYINQFPFEACLVMKHHLAETIQKAHGLVEWLQPTYNLETQLTQLIGDFHQREREK---------------------LDNLWILKPWNMARTIDTTITSNLSAIIRLMETGPKICQKYIEHPALFKGRKFDLRYIVLVRSMNPLEIFLAEVFWVRLANNTYTLEKHSFDEYETHFTVMNYRGRLNHMNTP----DFVKEFEKEH-KVNWLDIHSRIRRMIKSAFEAAAVVHPEM----HHSKSRAMYGVDVMLDCHFQPKLLEITYCPDCGRAVKYDTEAVVGGGETVKGKDFYNYIFGCLFLNE 853
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|527200494|gb|EPS67911.1| (hypothetical protein M569_06860, partial [Genlisea aurea]) HSP 1 Score: 276.944 bits (707), Expect = 4.891e-81 Identity = 179/536 (33.40%), Postives = 270/536 (50.37%), Query Frame = 0
Query: 172 TLYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAG---YTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDA--------------DFYNKAFGIIFRGE 690
+L ++V +W Y +YRL D + +VW+V DE GSA +H+ A NFR+SPF+Y P G L+ A+ YSL WP ++ G+ECT DY FG + +R+ RL WF P R F + + + S ++ PS+ F R VLRV+ D V LSR + + +AD++W T + ++ GL + ++Q + CLV KH L T + G WL TYN+ET+ A I +Y R EGA+ + L+ILKPWN+ R++D+ V D+L ++L +T PK+ +Y+ A RKFD+RY + +R++ PLEIF + VR++N+PYSL +++ HFTVM+Y G + TP DF+E F++++ V W ++D ++ ++I+++FE A I G +S + YGVDVM+ QPK+LE T+ PDC A K D DFYN FG +F E
Sbjct: 58 SLIDRVLSAMWFYAMTYRLADE-EKIDETSVWYVMDELGSALRHSDEA--NFRVSPFLYMPD-GKLESAVSYSLLWPTKDVQRGDECTRDYLFGIGENK--------------QRSARLTAWFCTP---RDYFLREYRKHETKLRS-----EKNTRFPEIPSSTTCNLFEIHGR----VLRVFTDIPPVEECLSRPEFIITTDVKDADIIWT-STQVDEEMKKAAGLTVKQYINQFPFEACLVMKHHLAETVQKVHGVADWLQPTYNLETQLAQLIGDY------LSREMEGAD--------------NNLWILKPWNMARTIDTTVTDNLSAIIRLMETGPKICQKYIEHPALFRGRKFDLRYIVLIRSFNPLEIFLTDIFWVRLANNPYSLEKHTFFEYETHFTVMNYRGKLNHMNTP----DFVEGFQQEH-HVDWLDIDGRIRQMIRSVFEAAVI---THPGIHS-PKSRAMYGVDVMLDSHYQPKLLEVTYCPDCTRACKYDTQTATGERGGIVRGRDFYNIVFGCLFLNE 533
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|1025110720|ref|XP_016461435.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Nicotiana tabacum]) HSP 1 Score: 283.493 bits (724), Expect = 1.388e-80 Identity = 183/535 (34.21%), Postives = 273/535 (51.03%), Query Frame = 0
Query: 173 LYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPS-TALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAG---YTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDA-------------DFYNKAFGIIFRGE 690
L ++V +W Y+ +YRL D + +VW+V DEFGSA +H+ NFR+SPF+Y P G+L A+ YS+ WPI ++ EG+ECT DY FG EEK +R+ RL WF P R F + + K S N PV S T H S LRVY D V +L+R + EP +AD++W I ++ GL + ++Q + CLV KH L T +A G WL TYN+ET+ I ++ +R E L L+ILKPWN+ R++D+ + +L ++L +T PK+ +Y+ A RKFD+RY + VR+ PLEIF + VR++N+ Y+L + ++++ HFTVM+Y G + TP DF++ FE+++ V W ++ S++ ++I + FE AA++ E ++S + YGVDVM+ QPK+LE T+ PDC A+K D DFYN FG +F E
Sbjct: 382 LEDRVINAMWLYLMTYRLADE-EKIDETSVWYVMDEFGSALRHSDKP--NFRVSPFLYMP-EGNLASAVSYSIIWPIDDVREGDECTRDYLFGIG---------EEK-----QRSARLTAWFHTP---RNYFIKEYEKYKNKLQS-----NKFVSPVQGSSVTNSLCHGDGS------ALRVYTDIPPVEEYLTRPEFVITTEPKDADIIWT-SMQIDEETKKAAGLNDEQYINQFPFEACLVMKHHLAETIQKAHGLVEWLQPTYNLETQLTQLIGDFHQREREK---------------------LDNLWILKPWNMARTIDTTITSNLSAIIRLMETGPKIGQKYIEHPALFKGRKFDLRYIVLVRSMNPLEIFLAEVFWVRLANNTYTLEKHSFDEYETHFTVMNYRGRLNHMNTP----DFVKEFEKEH-KVNWLDIHSRIRRMITSAFEAAAVVHPEM----HHSKSRAMYGVDVMLDCHFQPKLLEITYCPDCGRAVKYDTEAVVGGGETVKGKDFYNYIFGCLFLNE 853
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|1111104744|ref|XP_019245868.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 isoform X1 [Nicotiana attenuata] >gi|1102147231|gb|OIT03544.1| hypothetical protein A4A49_11377 [Nicotiana attenuata]) HSP 1 Score: 283.493 bits (724), Expect = 1.867e-80 Identity = 183/535 (34.21%), Postives = 273/535 (51.03%), Query Frame = 0
Query: 173 LYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPS-TALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAG---YTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDA-------------DFYNKAFGIIFRGE 690
L ++V +W Y+ +YRL D + +VW+V DE GSA +H+ + NFR+SPF+Y P G+L A+ YS+ WPI ++ EG+ECT DY FG EEK +R+ RL WF P R F + + K S N PV S T H S LRVY D V +L+R + EP +AD++W I ++ GL + ++Q + CLV KH L T +A G WL TYN+ET+ I ++ +R E L L+ILKPWN+ R++D+ + +L ++L +T PK+ +Y+ A RKFD+RY + VR+ PLEIF + VR++N+ Y+L + ++++ HFTVM+Y G + TP DF++ FE+++ V W ++ S++ +IK+ FE AA++ E ++S + YGVDVM+ QPK+LE T+ PDC A+K D DFYN FG +F E
Sbjct: 382 LEDRVINAMWLYLMTYRLADE-EKIDETSVWYVMDELGSALRHSDKS--NFRVSPFLYMPE-GNLASAVSYSILWPIDDVREGDECTRDYLFGIG---------EEK-----QRSARLTAWFHTP---RNYFIKEYEKYKNKLQS-----NKFVSPVQGSSVTNSLCHGDGS------ALRVYTDIPPVEEYLTRPEFVITTEPKDADIIWT-SMQIDEETKKAAGLNDEQYINQFPFEACLVMKHHLAETIKKAHGLVEWLQPTYNLETQLTQLIGDFHQREREK---------------------LDNLWILKPWNMARTIDTTITSNLSAIVRLMETGPKICQKYIEHPALFQGRKFDLRYIVLVRSMNPLEIFLAEVFWVRLANNTYTLEKHSFDEYETHFTVMNYRGRLNHMNTP----DFVKEFEKEH-EVNWLDIHSRIRSMIKSAFEAAAVVHPEM----HHSKSRAMYGVDVMLDCQFQPKLLEITYCPDCGRAVKYDTEAVVGGGETVKGKDFYNYIFGCLFLNE 853
BLAST of EWM30567.1 vs. NCBI_GenBank
Match: gi|1025327002|ref|XP_016505294.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Nicotiana tabacum]) HSP 1 Score: 281.952 bits (720), Expect = 6.558e-80 Identity = 179/534 (33.52%), Postives = 270/534 (50.56%), Query Frame = 0
Query: 173 LYEQVCEQIWRYVSSYRLVDPGDPFKFKTVWFVKDEFGSAFQHAPPALVNFRISPFIYFPPTGSLKGAMGYSLAWPIANIAEGEECTHDYAFGCANVRDNSITQEEKFLRWMKRACRLAVWFELPLSVRAIFEAAHAERKQLFLSLAVSVNAASKPVADPSTALAAHFSRSWRHSPLVLRVYNDNGQVLRHLSRADVQRAAEPAEADVLWVYHTAITPHYRRRHGLGLDVVVSQTGGDECLVFKHLLPLTATRAPGSQAWLPDTYNMETETAAFIHEYSRRSDEAHRSGEGAEHPPHAQEHGPSTPLSPLFILKPWNLGRSMDSAVADSLPQALQLAKTCPKVASQYVYDIATVNDRKFDVRYRLFVRAWEPLEIFRWVHWGVRVSNHPYSLAAENINDFQAHFTVMDYAG---YTQTPVSETDFLEAFERDNGGVPWSEVDSKVEKIIKNLFETAAILILERTGREEVAQSFSFYGVDVMVTKDLQPKILECTFGPDCASALKLDA-------------DFYNKAFGIIFRGE 690
L ++V +W Y+ +YRL D + +VW+V DE GSA +H+ NFR+SPF+Y P G+L A+ YS+ WPI ++ EG+ECT DY FG EEK +R+ RL WF P + F + + K S N PV S + LRVY D V +L+R + EP +AD++W I ++ GL + ++Q + CLV KH L T +A G WL TYN+ET+ I ++ +R E L L+ILKPWN+ R++D+ + +L ++L +T PK+ +Y+ A RKFD+RY + VR+ PLEIF + VR++N+ Y+L + ++++ HFTVM+Y G + TP DF++ FE+++ V W ++ S++ +IK+ FE AA++ E ++S + YGVDVM+ QPK+LE T+ PDC A+K D DFYN FG +F E
Sbjct: 382 LEDRVINAMWLYLMTYRLADE-EKIDETSVWYVMDELGSALRHSDKP--NFRVSPFLYMP-EGNLASALSYSILWPIDDVREGDECTRDYLFGIG---------EEK-----QRSARLTAWFHTP---KNYFLKEYEKYKNKLQS-----NKFVSPVQGSSVTNSLRLGDG-----SALRVYTDIPPVEEYLTRPEFVITTEPKDADIIWT-SMQIDEERKKAAGLNDEQYINQFPFEACLVMKHHLAETIQKAHGLVEWLQPTYNLETQLTQLIGDFHQREREK---------------------LDNLWILKPWNMARTIDTTITSNLSAIIRLMETGPKIGQKYIEHPALFKGRKFDLRYIVLVRSMNPLEIFLAEVFWVRLANNTYTLEKHSFDEYETHFTVMNYRGRLNHMNTP----DFVKEFEKEH-EVNWLDIHSRIRSMIKSAFEAAAVVHPEM----HHSKSRAMYGVDVMLDCHFQPKLLEITYCPDCGRAVKYDTEALGGGGETVKGKDFYNYIFGCLFLNE 853 The following BLAST results are available for this feature:
BLAST of EWM30567.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|