EWM22276.1, cds8396 (CDS) Nannochloropsis gaditana

Overview
NameEWM22276.1
Unique Namecds8396
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:650122..650128 -
Alignment locationKK037248.1:649853..650073 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22276.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100827g3.5232.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:650122..650128 -
KK037248.1supercontigKK037248.1:649853..650073 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22276.1 vs. NCBI_GenBank
Match: gi|585102745|gb|EWM22276.1| (hypothetical protein Naga_100827g3 [Nannochloropsis gaditana])

HSP 1 Score: 155.606 bits (392), Expect = 3.675e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MQVACDDIPSVASTSRARSSRVFTGAHSNSCRLHDSFMACSGATLAVKDLPRMYLAGGGRNVPPIMLTNMTSYMN 75
            MQVACDDIPSVASTSRARSSRVFTGAHSNSCRLHDSFMACSGATLAVKDLPRMYLAGGGRNVPPIMLTNMTSYMN
Sbjct:    1 MQVACDDIPSVASTSRARSSRVFTGAHSNSCRLHDSFMACSGATLAVKDLPRMYLAGGGRNVPPIMLTNMTSYMN 75
The following BLAST results are available for this feature:
BLAST of EWM22276.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102745|gb|EWM22276.1|3.675e-48100.00hypothetical protein Naga_100827g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8423rna8423Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications