EWM22282.1, cds8394 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|585102754|gb|EWM22282.1| (sterol carrier protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 207.223 bits (526), Expect = 1.018e-67 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query: 1 MEKALKNEGAALAKKINGNYRFVVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
MEKALKNEGAALAKKINGNYRFVVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL
Sbjct: 1 MEKALKNEGAALAKKINGNYRFVVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|669160674|ref|XP_008615899.1| (hypothetical protein SDRG_11631 [Saprolegnia diclina VS20] >gi|530732331|gb|EQC30573.1| hypothetical protein SDRG_11631 [Saprolegnia diclina VS20]) HSP 1 Score: 104.375 bits (259), Expect = 1.913e-25 Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0
Query: 3 KALKNEGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
+A+K +G AL K+ G +F + G W LDLK + SL G K P D+T+ VSD DF+ I GKLN+QQAFMKGKLK+KGNMG+AMKL ++ A+ KAKL
Sbjct: 147 EAVKTQGPALVAKVKGTIQFNIAPGGAWFLDLKNGNGSLETGSK--PADLTINVSDEDFMAIADGKLNAQQAFMKGKLKVKGNMGLAMKLNIVIDAAKPKAKL 247 HSP 2 Score: 79.7221 bits (195), Expect = 5.637e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 0
Query: 12 LAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
L KK+NG+ +F V G W+++LK A ++ + D+T+ +S+ DFV ++ KLN Q AFMKGK+K+KGNMG+AMKL ++ TKA L
Sbjct: 22 LVKKVNGSIKFDVKGAGMWLINLKAAPGAVTASNAGEKADLTITISEPDFVDLINEKLNPQAAFMKGKIKVKGNMGLAMKLSAVTN--ATKAYL 113
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|1173928714|gb|OQR82234.1| (hypothetical protein ACHHYP_16346 [Achlya hypogyna]) HSP 1 Score: 103.99 bits (258), Expect = 3.026e-25 Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 0
Query: 3 KALKNEGAALAKKINGNYRFVVDDGN-WVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
+A+K +G L K+ G +F + G W LDLK S SL G K P D+T+ V+D DFV I GKLN+QQAFMKGKLK+KGNMG+AMKL + + A+ KAKL
Sbjct: 152 EAVKTQGPQLVSKVKGTIQFNISPGGAWFLDLKNGSGSLVTGSK--PADLTINVADEDFVAIADGKLNAQQAFMKGKLKVKGNMGLAMKLNVVFEAAKPKAKL 252 HSP 2 Score: 79.337 bits (194), Expect = 7.662e-16 Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 0
Query: 12 LAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESI 94
L KK+NG +F V G W++ LK A ++ D+T+ +S+ADF+ ++ KLN Q AFMKGK+K+KGNMG+AMKL ++
Sbjct: 22 LVKKVNGTIKFDVKGAGLWLISLKAAPGAVTASTAAEKADLTITISEADFIDLINEKLNPQAAFMKGKIKVKGNMGLAMKLSAV 105
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|813117659|ref|XP_012195711.1| (hypothetical protein SPRG_19298 [Saprolegnia parasitica CBS 223.65] >gi|641539890|gb|KDO33685.1| hypothetical protein SPRG_19298 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 107.071 bits (266), Expect = 8.028e-25 Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0
Query: 3 KALKNEGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
+A+K +G AL K+ G +F + G W LDLK + SL G K P D+T+ VSD DF+ I GKLN+QQAFMKGKLK+KGNMG+AMKL ++ A+ KAKL
Sbjct: 805 EAVKTQGPALVAKVKGTIQFNIAPGGAWFLDLKNGNGSLETGSK--PADLTINVSDEDFMAIADGKLNAQQAFMKGKLKVKGNMGLAMKLNIVIDAAKPKAKL 905 HSP 2 Score: 81.2629 bits (199), Expect = 8.800e-16 Identity = 38/84 (45.24%), Postives = 58/84 (69.05%), Query Frame = 0
Query: 12 LAKKINGNYRFVVDD-GNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESI 94
L KK+NG+ +F V G W+++LK A ++ + D+T+ +S+ DFV ++ KLN Q AFMKGK+K+KGNMG+AMKL ++
Sbjct: 680 LVKKVNGSIKFDVKGAGMWLINLKAAPGAVTASNAGEKADLTITISEPDFVDLINEKLNPQAAFMKGKIKVKGNMGLAMKLSAV 763
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|953487999|emb|CEG48016.1| (scp2 sterol transfer family protein [Plasmopara halstedii]) HSP 1 Score: 99.3673 bits (246), Expect = 1.525e-23 Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 0
Query: 8 EGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
+G A++KK+ G +F V GNW LDLK +P+L G K + DVT+ VSDADFV I GKLN+QQAFMKGKLK+KGNM +AMKL + + ++KL
Sbjct: 151 DGVAMSKKVKGIIQFDVTGAGNWNLDLKSPTPALTEGSKQA--DVTITVSDADFVDIALGKLNAQQAFMKGKLKLKGNMTLAMKLPVVFNAIKPQSKL 246 HSP 2 Score: 83.5741 bits (205), Expect = 2.250e-17 Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 1 MEKALKNEGAALAKKINGNYRFVVDD-GNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAK 103
M A+ G +L KK+NG +F + G W++DLK + S++ DVT+ +++ +F++++ KLN QQAFMKG LKIKGNMG+AMKL +L R K
Sbjct: 12 MSAAIDEVGPSLQKKVNGVIKFDIGGAGVWLVDLKNGNGSVKSATASETADVTISLTEENFIKMMNNKLNPQQAFMKGVLKIKGNMGLAMKLNVVLAATRNYMK 115
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|1173954840|gb|OQS01981.1| (hypothetical protein THRCLA_05605 [Thraustotheca clavata]) HSP 1 Score: 99.3673 bits (246), Expect = 1.775e-23 Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 0
Query: 3 KALKNEGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
+A+K +G L K+ G +F + G W LDLK S L G K P D+T+ VSD DF+ I GKLN+QQAFMKGKLK+KGNMG+AMKL ++ A+ K+KL
Sbjct: 144 EAVKTQGPQLVSKVKGTIQFNIAPGGAWYLDLKNGSGLLETGTK--PADLTINVSDDDFMAIADGKLNAQQAFMKGKLKVKGNMGLAMKLNVVIDAAKPKSKL 244 HSP 2 Score: 85.5001 bits (210), Expect = 3.491e-18 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0
Query: 12 LAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
L KK+NG+ +F V G W+++LK A S+ + D+T+ +S+ADFV ++ KLN Q AFMKGKLKIKGNMG+AMKL ++ A TKA L
Sbjct: 22 LVKKVNGSIKFDVKGAGMWLINLKSAPGSVTASNATDKADLTITISEADFVDLINEKLNPQAAFMKGKLKIKGNMGLAMKLSAV--TAATKAYL 113
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|330804236|ref|XP_003290103.1| (hypothetical protein DICPUDRAFT_48962 [Dictyostelium purpureum] >gi|325079768|gb|EGC33352.1| hypothetical protein DICPUDRAFT_48962 [Dictyostelium purpureum]) HSP 1 Score: 102.064 bits (253), Expect = 2.328e-23 Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 0
Query: 1 MEKALKNEGAALAKKINGNYRFVVDDGN----WVLDLKGASPSLRIGD--KDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILK 96
++K +++ GA L KKING Y F V +G+ WVLDLK S S+ +G K P +VT+ VSD DF QI+TGKLN+Q AFMKGKLKI+GNMG+A KL SI++
Sbjct: 338 IQKTIQSNGADLVKKINGVYLFNVKNGSKVQSWVLDLKNGSGSISVGSESKGKP-NVTIAVSDDDFTQIMTGKLNAQSAFMKGKLKIQGNMGLATKLGSIMQ 438
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|695446584|ref|XP_009534521.1| (hypothetical protein PHYSODRAFT_347773 [Phytophthora sojae] >gi|348669838|gb|EGZ09660.1| hypothetical protein PHYSODRAFT_347773 [Phytophthora sojae]) HSP 1 Score: 97.8265 bits (242), Expect = 8.173e-23 Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 0
Query: 8 EGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
+GA++AKK+ G +F + G W LDLK A+P+L G K + DVT+ V+DADFV I GKLN+QQAFMKGKLK+KGNM +AMKL + + ++KL
Sbjct: 157 DGASMAKKVKGVIQFDITGAGKWNLDLKSATPALTEGTKKA--DVTITVADADFVAIAMGKLNAQQAFMKGKLKLKGNMTLAMKLPVVFNALKPQSKL 252 HSP 2 Score: 70.8626 bits (172), Expect = 1.534e-12 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0
Query: 1 MEKALKNEGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAK 103
M A+ G +L K+ G +F + G W++DLK S++ D+T+ +S+ +F++++ KLN QQAFMKG +KIKGNMG+AMKL +L R K
Sbjct: 12 MSGAVDEVGPSLVSKVKGVIKFDISGAGAWLVDLKNGKGSVKAATAADKADLTITLSEENFLKMMDNKLNPQQAFMKGLVKIKGNMGLAMKLNVVLAATRNYMK 115
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|1214681736|gb|OWZ00353.1| (Peroxisomal protein pox18 [Phytophthora megakarya]) HSP 1 Score: 97.0561 bits (240), Expect = 1.356e-22 Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0
Query: 3 KALKNEGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
+A+ +GA +AKK+ G +F V G W LDLK A+PSL G + + DVT+ +SD DFV I GKLN+QQAFMKGKLK+KGNM +AMKL + + ++KL
Sbjct: 149 EAVAKDGAMMAKKVKGIIQFDVTGAGKWNLDLKSATPSLTEGSQKA--DVTITISDPDFVAIALGKLNAQQAFMKGKLKLKGNMTLAMKLPVVFNALKPQSKL 249 HSP 2 Score: 79.337 bits (194), Expect = 7.325e-16 Identity = 43/104 (41.35%), Postives = 63/104 (60.58%), Query Frame = 0
Query: 1 MEKALKNEGAALAKKINGNYRF-VVDDGNWVLDLKGASPSLRIGDKDSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAK 103
M A+ G +L K+ G +F + G W++DLK S++ D D+T+ +S+ DF++++ KLN QQAFMKG +KIKGNMG+AMKL +L R K
Sbjct: 12 MSGAVDEVGPSLVSKVKGVIKFDISGAGAWLVDLKNGKGSVKSATADDKADLTITLSEEDFLKMMDNKLNPQQAFMKGLVKIKGNMGLAMKLNVVLAATRNYMK 115
BLAST of EWM22282.1 vs. NCBI_GenBank
Match: gi|1004137947|gb|KXZ45967.1| (hypothetical protein GPECTOR_49g551 [Gonium pectorale]) HSP 1 Score: 93.9745 bits (232), Expect = 1.388e-22 Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 0
Query: 6 KNEGAALAKKINGNYRFVVDDGNWVLDL-KGASPSLRIGDK---DSPVDVTLRVSDADFVQIVTGKLNSQQAFMKGKLKIKGNMGMAMKLESILKLARTKAKL 104
K EGAALA KI G F +DD W LDL +G +L G D P D+TL +SD +FV +V GKLN QQAF+ KLKI G+MGMAMKL+ IL A+ ++KL
Sbjct: 33 KGEGAALANKIKGVVVFKIDDDEWTLDLTEGTEGALYEGPPKSGDKP-DLTLTISDTNFVALVMGKLNPQQAFLMRKLKINGSMGMAMKLQPILDAAQPQSKL 134 The following BLAST results are available for this feature:
BLAST of EWM22282.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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