EWM22284.1, cds8389 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22284.1 vs. NCBI_GenBank
Match: gi|585102758|gb|EWM22284.1| (hypothetical protein Naga_100224g7, partial [Nannochloropsis gaditana]) HSP 1 Score: 328.561 bits (841), Expect = 1.167e-113 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 1 MSKASRRKYQLLLLLLWSLYAVGFRHFSTSRRHLSPSDLSIPLRATAATSSTTSTSPPSLASSPLSTSAARSRPSSSILDRIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKQKRVKRDTRRIAEGLGPLHA 167
MSKASRRKYQLLLLLLWSLYAVGFRHFSTSRRHLSPSDLSIPLRATAATSSTTSTSPPSLASSPLSTSAARSRPSSSILDRIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKQKRVKRDTRRIAEGLGPLHA
Sbjct: 1 MSKASRRKYQLLLLLLWSLYAVGFRHFSTSRRHLSPSDLSIPLRATAATSSTTSTSPPSLASSPLSTSAARSRPSSSILDRIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKQKRVKRDTRRIAEGLGPLHA 167
BLAST of EWM22284.1 vs. NCBI_GenBank
Match: gi|553190157|ref|XP_005855139.1| (hypothetical protein NGA_0090600, partial [Nannochloropsis gaditana CCMP526] >gi|422293921|gb|EKU21221.1| hypothetical protein NGA_0090600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.409 bits (581), Expect = 8.774e-74 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query: 45 ATAATSSTTSTSPPSLASSPLSTSAARSRPSSSILDRIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKQKRVKRDTRRIAEGL 162
ATAATSSTTSTSPPSLASSPLSTSAARSRPSSSILDRIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKQKRVKRDTRRIAEGL
Sbjct: 1 ATAATSSTTSTSPPSLASSPLSTSAARSRPSSSILDRIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKQKRVKRDTRRIAEGL 118
BLAST of EWM22284.1 vs. NCBI_GenBank
Match: gi|298713164|emb|CBJ26920.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 68.9366 bits (167), Expect = 1.333e-10 Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0
Query: 81 RIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGK 147
++ AG+ + LL+ V AT G V+ E F+A+FPF LD FQ AL L GR NV+VSAPTGSGK
Sbjct: 351 ELQEVAGSASAVPLLQSIVNATPDGAVQPELFQALFPFELDPFQTEALRGLAGRNNVIVSAPTGSGK 417
BLAST of EWM22284.1 vs. NCBI_GenBank
Match: gi|551656783|ref|XP_005831164.1| (hypothetical protein GUITHDRAFT_109969 [Guillardia theta CCMP2712] >gi|428175293|gb|EKX44184.1| hypothetical protein GUITHDRAFT_109969 [Guillardia theta CCMP2712]) HSP 1 Score: 58.9214 bits (141), Expect = 4.663e-7 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0
Query: 81 RIKAQAGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGK 147
I + +GTPEV+ L+ TG ++ E + FPFP+D+FQ+ A+ AL + +V+VSAPTGSGK
Sbjct: 30 NIASLSGTPEVVDALRSKFRQTG--QITTEELASCFPFPVDEFQMDAIRALIEKRSVIVSAPTGSGK 94 The following BLAST results are available for this feature:
BLAST of EWM22284.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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