EWM22299.1, cds8373 (CDS) Nannochloropsis gaditana

Overview
NameEWM22299.1
Unique Namecds8373
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:576030..576599 +

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Properties
Property NameValue
Protein idEWM22299.1
ProductIQ motif, EF-hand binding site
Orig transcript idgnl|cribi|Naga_100913g1.374.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:576030..576599 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
Homology
[Close]
BLAST of EWM22299.1 vs. NCBI_GenBank
Match: gi|585102784|gb|EWM22299.1| (IQ motif, EF-hand binding site [Nannochloropsis gaditana])

HSP 1 Score: 375.555 bits (963), Expect = 1.163e-131
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 
Query:    1 MTVLGDKGEGGREGGGEGVKVGVGEAYDRLVGPGVRTTEEGKKMARSLEEDVVGLQNQARGKLARKLRRVLEEPLMDVCKRIVEARCAGSAYASVRGFRRDVHRECGHFVRKHEVGGKLSARMVQQVIDQFIDMELGACLETVGKEERRLRFWRKVTWGVGGGLGPPCLHEISDRDCAGRWLPAPSSRA 189
            MTVLGDKGEGGREGGGEGVKVGVGEAYDRLVGPGVRTTEEGKKMARSLEEDVVGLQNQARGKLARKLRRVLEEPLMDVCKRIVEARCAGSAYASVRGFRRDVHRECGHFVRKHEVGGKLSARMVQQVIDQFIDMELGACLETVGKEERRLRFWRKVTWGVGGGLGPPCLHEISDRDCAGRWLPAPSSRA
Sbjct:    1 MTVLGDKGEGGREGGGEGVKVGVGEAYDRLVGPGVRTTEEGKKMARSLEEDVVGLQNQARGKLARKLRRVLEEPLMDVCKRIVEARCAGSAYASVRGFRRDVHRECGHFVRKHEVGGKLSARMVQQVIDQFIDMELGACLETVGKEERRLRFWRKVTWGVGGGLGPPCLHEISDRDCAGRWLPAPSSRA 189
[Close]
BLAST of EWM22299.1 vs. NCBI_GenBank
Match: gi|585106924|gb|EWM25232.1| (guanylate-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 81.6481 bits (200), Expect = 1.072e-14
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 0 
Query:   38 TEEGKKMARSLEEDVVGLQNQARGKLARKLRRVLEEPLMDVCKRIVEARCAGSAYASVRGFRRDVHRECGHFVRKHE-VGGKLSARMVQQVIDQFIDMELGACLETVGKEERRLRFWRK 155
            T E +  AR+LE +V GL  +AR ++A  L+  L+ PL ++CK +VEA+C   A  S RG R  V  ECG +VR+H+ VG  LS RM+++V+ +FID ELG C   V + E     WRK
Sbjct:  753 TSECQVHARALEGEVAGLVEEAREEVAAALKAALQVPLQEICKVVVEAKC--PAIYSARGLRATVQGECGKWVRRHDAVGAALSPRMLKRVLLRFIDEELGECHAQVKEREVE---WRK 866
The following BLAST results are available for this feature:
BLAST of EWM22299.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102784|gb|EWM22299.1|1.163e-131100.00IQ motif, EF-hand binding site [Nannochloropsis ga... [more]
gi|585106924|gb|EWM25232.1|1.072e-1444.54guanylate-binding protein [Nannochloropsis gaditan... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8400rna8400Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications