EWM22307.1, cds8366 (CDS) Nannochloropsis gaditana

Overview
NameEWM22307.1
Unique Namecds8366
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:563466..565583 +

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Properties
Property NameValue
Protein idEWM22307.1
ProductCalponin domain containing protein
Orig transcript idgnl|cribi|Naga_100465g3.10753.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:563466..565583 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
Homology
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BLAST of EWM22307.1 vs. NCBI_GenBank
Match: gi|585102796|gb|EWM22307.1| (Calponin domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1395.18 bits (3610), Expect = 0.000e+0
Identity = 705/705 (100.00%), Postives = 705/705 (100.00%), Query Frame = 0 
Query:    1 MAAGGCEGGGGRGRGEDQGPSSPSHLPLHRDSFRNGRFLCALFLRLEPEIAACTKGLQELLCEEDTSHSFLPPSLPPSPPSSLVRARERLGCAFWLFRCRTFPLIPLCYFERVEDVLLGDTTVLWSLLWELRNIYNLSSPLPPSLPPSSPPCAPAGRSHSMKLPFEHAGNGTRAHGREPCEISREKDGATPYPPGGQRPAPRAWAPGQGTEAEGVRSEKTANARKFWSGRCGVPAGGGQKAMGVRGASPTRGQALTGGDSTEGGGESLGAQDGMPSKGAEGERPRWEEERARRQRTESGQGEGGGKGGGEEGNDAGESRGFPEDLYPHPYGPSPSCSPVPTLSSLRPHAFSPDRVREAISFHGASAGEASSGERDGRLPRSIQTPRHDQGQPLWARPRHWHQEHLHEEGAKTRHTILREGRARSDDHGRSAGRDRTPMGKTISMRVSPSLSQEDASVSPSAPSAAASALSSSYSLSRGASVSGHALRPDRLPCPFLSESERRAAPSPALSPSFASPTLGYPPSSQDFDHSFPPEAFTRPLTDFSAPLLHAQPILSPRLSEDEASLPCPARLGSAEAEDILGWLGAHGIVLQQPERLLLSSSQQSDCPEFSDGLLLARLLGRLEGWGEEGVEGIDWSPGTAVVTRLQNLKRVLDVWRRKRKGIPLHLLHREFDILEGRTDVLLPLLWHVRRVYDEGDGERPTETGL 705
            MAAGGCEGGGGRGRGEDQGPSSPSHLPLHRDSFRNGRFLCALFLRLEPEIAACTKGLQELLCEEDTSHSFLPPSLPPSPPSSLVRARERLGCAFWLFRCRTFPLIPLCYFERVEDVLLGDTTVLWSLLWELRNIYNLSSPLPPSLPPSSPPCAPAGRSHSMKLPFEHAGNGTRAHGREPCEISREKDGATPYPPGGQRPAPRAWAPGQGTEAEGVRSEKTANARKFWSGRCGVPAGGGQKAMGVRGASPTRGQALTGGDSTEGGGESLGAQDGMPSKGAEGERPRWEEERARRQRTESGQGEGGGKGGGEEGNDAGESRGFPEDLYPHPYGPSPSCSPVPTLSSLRPHAFSPDRVREAISFHGASAGEASSGERDGRLPRSIQTPRHDQGQPLWARPRHWHQEHLHEEGAKTRHTILREGRARSDDHGRSAGRDRTPMGKTISMRVSPSLSQEDASVSPSAPSAAASALSSSYSLSRGASVSGHALRPDRLPCPFLSESERRAAPSPALSPSFASPTLGYPPSSQDFDHSFPPEAFTRPLTDFSAPLLHAQPILSPRLSEDEASLPCPARLGSAEAEDILGWLGAHGIVLQQPERLLLSSSQQSDCPEFSDGLLLARLLGRLEGWGEEGVEGIDWSPGTAVVTRLQNLKRVLDVWRRKRKGIPLHLLHREFDILEGRTDVLLPLLWHVRRVYDEGDGERPTETGL
Sbjct:    1 MAAGGCEGGGGRGRGEDQGPSSPSHLPLHRDSFRNGRFLCALFLRLEPEIAACTKGLQELLCEEDTSHSFLPPSLPPSPPSSLVRARERLGCAFWLFRCRTFPLIPLCYFERVEDVLLGDTTVLWSLLWELRNIYNLSSPLPPSLPPSSPPCAPAGRSHSMKLPFEHAGNGTRAHGREPCEISREKDGATPYPPGGQRPAPRAWAPGQGTEAEGVRSEKTANARKFWSGRCGVPAGGGQKAMGVRGASPTRGQALTGGDSTEGGGESLGAQDGMPSKGAEGERPRWEEERARRQRTESGQGEGGGKGGGEEGNDAGESRGFPEDLYPHPYGPSPSCSPVPTLSSLRPHAFSPDRVREAISFHGASAGEASSGERDGRLPRSIQTPRHDQGQPLWARPRHWHQEHLHEEGAKTRHTILREGRARSDDHGRSAGRDRTPMGKTISMRVSPSLSQEDASVSPSAPSAAASALSSSYSLSRGASVSGHALRPDRLPCPFLSESERRAAPSPALSPSFASPTLGYPPSSQDFDHSFPPEAFTRPLTDFSAPLLHAQPILSPRLSEDEASLPCPARLGSAEAEDILGWLGAHGIVLQQPERLLLSSSQQSDCPEFSDGLLLARLLGRLEGWGEEGVEGIDWSPGTAVVTRLQNLKRVLDVWRRKRKGIPLHLLHREFDILEGRTDVLLPLLWHVRRVYDEGDGERPTETGL 705
The following BLAST results are available for this feature:
BLAST of EWM22307.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102796|gb|EWM22307.1|0.000e+0100.00Calponin domain containing protein [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8393rna8393Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications