EWM22313.1, cds8360 (CDS) Nannochloropsis gaditana

Overview
NameEWM22313.1
Unique Namecds8360
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:547811..547964 -
Alignment locationKK037248.1:545614..547493 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22313.1
Productpolyribonucleotide nucleotidyltransferase
Orig transcript idgnl|cribi|Naga_101073g1.6903.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:547811..547964 -
KK037248.1supercontigKK037248.1:545614..547493 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004518nuclease activity
GO:00001753'-5'-exoribonuclease activity
GO:0003723RNA binding
GO:0004654polyribonucleotide nucleotidyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006396RNA processing
GO:0006402mRNA catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR027408PNPase/RNase_PH_dom
IPR015847ExoRNase_PH_dom2
IPR001247ExoRNase_PH_dom1
IPR015848PNPase_PH_RNA-bd_bac/org-type
IPR012162PNPase
Homology
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|585102808|gb|EWM22313.1| (polyribonucleotide nucleotidyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 1374.38 bits (3556), Expect = 0.000e+0
Identity = 677/677 (100.00%), Postives = 677/677 (100.00%), Query Frame = 0
Query:    1 MPPPLFFLIVVATLSCHSPWSRYGHVQAFLSPHPRSRGTPEFRAVERRTPDASPLSLSAHTLSTSTSGGPTGTFFTEEKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQVGRGGRRAGGRAGGKRRPLRCLVK 677
            MPPPLFFLIVVATLSCHSPWSRYGHVQAFLSPHPRSRGTPEFRAVERRTPDASPLSLSAHTLSTSTSGGPTGTFFTEEKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQVGRGGRRAGGRAGGKRRPLRCLVK
Sbjct:    1 MPPPLFFLIVVATLSCHSPWSRYGHVQAFLSPHPRSRGTPEFRAVERRTPDASPLSLSAHTLSTSTSGGPTGTFFTEEKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQVGRGGRRAGGRAGGKRRPLRCLVK 677          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|1210527221|dbj|GAX13856.1| (polyribonucleotide nucleotidyltransferase [Fistulifera solaris])

HSP 1 Score: 609.372 bits (1570), Expect = 0.000e+0
Identity = 318/633 (50.24%), Postives = 429/633 (67.77%), Query Frame = 0
Query:   42 FRAVERRTPDASPLSLSAHTLST-------STSGGPTG------TFFTEEKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQ-ELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVG-RVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKS-GNRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDE----AVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
            F  + R++    P SLSA   +T       +T+ GP G       F      + +     +  ETGKIGR A G+VT+ +G++V+YA+A  + KP+ E+DF PL +++ ERFS+AG+TSGSY KRDGRA++ EIL  RLIDRP+RP++   W  ETQ+LSWV SYDG+ + +P+AI +++ A+ LS +PL  PVA VQVG   DG  ++NPT ++MA S L+L VAGT++ ILMIEGAA+FLPEE+ L A++ GH AI  +C+ ++E+G  VG  K L  L L P  L+  + E +   +D    + G +    A +  ++ ++V +L  +   PD E +A  +K+ FK L+ +RM         RADGR    VR I IE G LP  HGS LFTRGETQA+ T TLG+ GM Q+ + LDG + KRFYLQYSFPPSSVGE GRVGAPGRRE+GHGNLAERAL+P +PSEE+FPY +RVES+I ES GSSSMAS CGG L+LMD GVP+K+ +AG+AMG+LL +    + +  ++L+DI G EDA GTMDFK+ GD  GVTTFQLDIKC GLTF T+++AL QA++GRLHIL  M++   APRAE+   V +I    +    +GK+IGP G+Q+
Sbjct:   17 FSPLHRQSYLRIPTSLSATNGATDEYYSIETTNDGPQGGAVHKIIFHKLNDKDTDTDMPPIVIETGKIGRQAAGAVTLTRGDSVLYATAARDEKPKAEIDFLPLSVEHQERFSSAGLTSGSYNKRDGRAAEHEILTCRLIDRPIRPLVASGWRHETQLLSWVLSYDGIRSCDPLAIVSSATALYLSDVPLLKPVAAVQVGMDEDGSFLLNPTNEQMAKSALHLTVAGTQDAILMIEGAADFLPEEIFLKAVQHGHDAIQILCKGIKEFGETVGITKNLETLKLPPDGLQQRVDELFTAKVDEMYATLGTKEEQGALMSALQKNVVETL--EEEFPD-ESIA--IKMAFKDLLSRRMFERAKTTGMRADGRELGAVRRIDIEAGFLPRVHGSALFTRGETQAIATATLGDSGMRQKIDKLDGLEEKRFYLQYSFPPSSVGETGRVGAPGRREVGHGNLAERALIPTLPSEEEFPYTIRVESLITESHGSSSMASVCGGCLSLMDAGVPIKKPVAGIAMGMLLGDKGGLSDENALILSDITGTEDALGTMDFKVAGDRHGVTTFQLDIKCEGLTFETMQRALEQARQGRLHILDEMDKVLSAPRAELPPTVPKIMSFTVPSESLGKIIGPGGKQI 644          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|1210524146|dbj|GAX16875.1| (polyribonucleotide nucleotidyltransferase [Fistulifera solaris])

HSP 1 Score: 602.823 bits (1553), Expect = 0.000e+0
Identity = 304/573 (53.05%), Postives = 406/573 (70.86%), Query Frame = 0
Query:   89 LAFETGKIGRSADGSVTVRQGETVVYASACAENKPQ-ELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVG-RVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKS-GNRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDE----AVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
            +  ETGKIGR A G+VT+ +G++V+YA+A  + KP+ E+DF PL +++ ERFS+AG+TSGSY KRDGR ++ EIL  RLIDRP+RP++   W  ETQ+LSWV SYDG+ + +P+AI +++ A+ LS +PL  PVA VQVG   DG  ++NPT ++MA S L+L VAGT++ ILMIEGAA+FLPEE+ L A++ GH AI  +C+ ++E+G  VG  K L  L L P  L+  + E +   +D    + G +    A +  ++ ++V  L  +   PD E +A  +K+ FK L+ +RM         RADGR    VR I IE G LP  HGS LFTRGETQA+ T TLG+ GM Q+ + LDG + KRFYLQYSFPPSSVGE GRVGAPGRRE+GHGNLAERAL+P +PSEE+FPY +RVES+I ES GSSSMAS CGG L+LMD GVP+K+ +AG+AMG+LL +    + +  ++L+DI G EDA GTMDFK+ GD  GVTTFQLDIKC GLTF T+++AL QA++GRLHIL  M++   APRAE+   V +I    +    +GK+IGP G+Q+
Sbjct:   75 IVIETGKIGRQAAGAVTLTRGDSVLYATAARDEKPRAEIDFLPLSVEHQERFSSAGLTSGSYNKRDGRPAEHEILTCRLIDRPIRPLVASGWRHETQLLSWVLSYDGIRSCDPLAIVSSATALYLSDVPLLKPVAAVQVGMDEDGSFLLNPTNEQMAKSALHLTVAGTQDAILMIEGAADFLPEEIFLKAVQHGHDAIQILCKGIKEFGETVGITKNLDTLKLPPDGLQERVDELFTTKVDEMYAALGTKEEQGALMSALQKNVVERL--EEEFPD-ESIA--IKMAFKDLLSRRMFERARTTGMRADGRELGAVRRIDIEAGFLPRVHGSALFTRGETQAIATATLGDSGMRQKIDKLDGLEEKRFYLQYSFPPSSVGETGRVGAPGRREVGHGNLAERALIPTLPSEEEFPYTIRVESLITESHGSSSMASVCGGCLSLMDAGVPIKKPVAGIAMGMLLGDKGGLSDENALILSDITGTEDALGTMDFKVAGDRHGVTTFQLDIKCEGLTFETMQRALEQARQGRLHILDEMDKVLSAPRAELPPTVPKIMSFTVPSESLGKIIGPGGKQI 642          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|1072231647|gb|OEU16379.1| (polyribonucleotide nucleotidyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 304/641 (47.43%), Postives = 422/641 (65.83%), Query Frame = 0
Query:   39 TPEFRAVERRTPDASPLSLSAHTLSTSTSGGPTGTFFTEEKM-----------------EVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQE-LDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVG--RVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSG-NRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDE----AVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
            TP      +R P  +  +LS+  + ++TS   +  +FT EK                  + E     +  E+GKIGR A G+VT+ +GETV+Y++A  + KP++ LDF PL +D+ ERFS+ G+TSG Y KRDGR ++ E+L  RLIDRPLRP++   W  ETQ+LSWV SYDG+H+++PMAI A+S A+ +S IPL  PVA   VG  R +  L++NPT +EM  S+L L+VAGT+EG+LM+EGAA+FLPE +++ A++ GH AI  IC A+ E+G   GK K L  L   P  L+  + E   + +DAA  +G  +      L  ++  ++A+L  DS     E+ A D+    K L+ +RM +       R DGR  +E+R +++E G LP  HGS LFTRGETQ + T TLG  GM Q+ +++ G++ KRFYLQY+FPPS VGE GR GAPGRRE+GHGNLAERAL+P +P+EE+FPY +RVE+++ ES GSSSMAS CGG LALMD G+P+K  +AG+AMG+LL +    + D  I+L+DILG EDA GTMDFK+ GD  G+TTFQLDIKC GL+  T+++AL QA+ GRLHIL  M+     PR  +   V +++   + P  IGK+IGP G+Q+
Sbjct:   17 TPCVEGFHQRQPWGTTSTLSSKRVDSTTSLKDSSEYFTIEKDNSGYSDVHRLIIHKLPGQKEGADDPIVIESGKIGRQAAGAVTLTRGETVLYSTASRDEKPKDGLDFIPLSVDHQERFSSVGLTSGGYNKRDGRPAEHEVLTCRLIDRPLRPLIAAGWRHETQLLSWVLSYDGIHSTDPMAIIASSTAMYISDIPLSKPVAAAMVGYDRENDELILNPTHEEMEKSSLQLIVAGTKEGVLMVEGAADFLPEAIMVKAVKFGHDAIVTICEAVEEFGKVAGKEKNLSTLSNPPEGLQEKVDELATEKVDAAFAAGGTKTTQGPVLKIVKKELIATLTEDSD----EYTAADISSALKDLLCRRMFIRAKETGKRCDGRELTEIRQLTMEAGFLPRTHGSALFTRGETQVVATSTLGGSGMRQKIDTITGTNVKRFYLQYTFPPSCVGETGRTGAPGRREVGHGNLAERALIPTLPTEEEFPYTIRVEALVTESHGSSSMASVCGGCLALMDAGIPIKSPVAGIAMGMLLGDREEVSDDNAIILSDILGTEDALGTMDFKVAGDRNGITTFQLDIKCEGLSLKTMDRALEQARVGRLHILDAMDAVLSEPRKVLPETVPKLATFSVAPDLIGKIIGPGGKQI 653          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|1084490933|gb|OGN54522.1| (polyribonucleotide nucleotidyltransferase [Chlamydiae bacterium GWF2_49_8] >gi|1084495534|gb|OGN58708.1| polyribonucleotide nucleotidyltransferase [Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_49_29] >gi|1084500335|gb|OGN63101.1| polyribonucleotide nucleotidyltransferase [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_32] >gi|1084509919|gb|OGN72118.1| polyribonucleotide nucleotidyltransferase [Chlamydiae bacterium RIFCSPLOWO2_12_FULL_49_12])

HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0
Identity = 305/585 (52.14%), Postives = 401/585 (68.55%), Query Frame = 0
Query:   74 FFTEEKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASAC-AENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASL---GVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
             F      VE+ G+ L FETGKI R A G+VT++ GETV+ A+AC AE   + +DF PLR+DY E+FS+ G T G + KR+GR ++REIL++RLIDRPLRP+  E +  E Q+L++V SYDG+H  +P+AICAASAA+ LS IPL  P+A V+VG++DGR VVNPT  EM  S L+L++AGTEE I+MIEG A+FL EE +L+A++EGH AI  ICR L+EW  ++GKPK    L L P  L   + + Y+K +   L++  +      LH   DSI+ +    GV++      +  RD+K   K L  + +  M      R DGR   EVRPI IE  +LP  HGS LFTRGETQ++   TLG + M+QR E+++   S+RFYLQY FPP SVGEVGR+GAPGRREIGHG LAER+L   IPS+E FPY +R+ES I ES GSSSMAS CGG+LALM+ GVP+K  IAG+AMGL+L+   +   VL+DILG EDA G MDFK+ G++ G+T FQLDIK  G+T   ++ AL QAK+GRLHILK M EACP P+  +     RI  +++ PS I  +IGP G+Q+
Sbjct:    2 MFKTHSKSVEINGRDLKFETGKIARQAHGAVTLQAGETVLLATACRAEKADEGIDFFPLRVDYQEKFSSTGKTLGGFIKREGRPTEREILLSRLIDRPLRPLFPEGYYKEVQILAYVLSYDGIHAPDPLAICAASAALTLSDIPLLKPIAAVRVGQIDGRFVVNPTIAEMEKSRLDLILAGTEEAIMMIEGYADFLTEEEILEAVQEGHGAIRQICRVLKEWREEIGKPKESLKLILPPAGLVSEIDKTYSKEVYERLQTPEKKKREEVLHAFADSILETYIPGGVETS-----YKKRDVKGAIKTLEARLLREMALKENRRIDGRTCDEVRPIQIETELLPRTHGSALFTRGETQSISVCTLGGEAMAQRYETIEIEGSRRFYLQYFFPPFSVGEVGRMGAPGRREIGHGKLAERSLALTIPSKEQFPYTIRLESNITESNGSSSMASVCGGTLALMEAGVPIKHPIAGIAMGLILEG--ENFAVLSDILGAEDALGDMDFKVAGNSFGITAFQLDIKIEGITAEIMKVALAQAKQGRLHILKKMMEACPRPKEHLSPYAPRIQTIQVKPSKIAIIIGPGGKQI 579          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|1084488951|gb|OGN52731.1| (polyribonucleotide nucleotidyltransferase [Chlamydiae bacterium GWA2_50_15] >gi|1084506437|gb|OGN68743.1| polyribonucleotide nucleotidyltransferase [Chlamydiae bacterium RIFCSPLOWO2_02_FULL_49_12])

HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0
Identity = 305/585 (52.14%), Postives = 401/585 (68.55%), Query Frame = 0
Query:   74 FFTEEKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASAC-AENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASL---GVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
             F      VE+ G+ L FETGKI R A G+VT++ GETV+ A+AC AE   + +DF PLR+DY E+FS+ G T G + KR+GR ++REIL++RLIDRPLRP+  E +  E Q+L++V SYDG+H  +P+AICAASAA+ LS IPL  P+A V+VG++DGR VVNPT  EM  S L+L++AGTEE I+MIEG A+FL EE +L+A++EGH AI  ICR L+EW  ++GKPK    L L P  L   + + Y+K +   L++  +      LH   DSI+ +    GV++      +  RD+K   K L  + +  M      R DGR   EVRPI IE  +LP  HGS LFTRGETQ++   TLG + M+QR E+++   S+RFYLQY FPP SVGEVGR+GAPGRREIGHG LAER+L   IPS+E FPY +R+ES I ES GSSSMAS CGG+LALM+ GVP+K  IAG+AMGL+L+   +   VL+DILG EDA G MDFK+ G++ G+T FQLDIK  G+T   ++ AL QAK+GRLHILK M EACP P+  +     RI  +++ PS I  +IGP G+Q+
Sbjct:    2 MFKTHSKSVEINGRDLKFETGKIARQAHGAVTLQAGETVLLATACRAEKADEGIDFFPLRVDYQEKFSSTGKTLGGFIKREGRPTEREILLSRLIDRPLRPLFPEGYYKEVQILAYVLSYDGIHAPDPLAICAASAALTLSDIPLLKPIAAVRVGQIDGRFVVNPTIAEMEKSRLDLILAGTEEAIMMIEGYADFLTEEEILEAVQEGHGAIRQICRVLKEWREEIGKPKESLKLILPPAGLVSEIDKTYSKEVYERLQTPEKKKREEVLHAFADSILETYIPGGVETS-----YKKRDVKGAIKTLEARLLREMALKENRRIDGRTCDEVRPIQIETELLPRTHGSALFTRGETQSISVCTLGGEAMAQRYETIEIEGSRRFYLQYFFPPFSVGEVGRMGAPGRREIGHGKLAERSLALTIPSKEQFPYTIRLESNITESNGSSSMASVCGGTLALMEAGVPIKHPIAGIAMGLILEG--ENFAVLSDILGAEDALGDMDFKVAGNSFGITAFQLDIKIEGITAEIMKVALAQAKQGRLHILKKMMEACPRPKEHLSPYAPRIQTIQVKPSKIAIIIGPGGKQI 579          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|1057061695|ref|WP_068467891.1| (polyribonucleotide nucleotidyltransferase [Parachlamydia sp. C2])

HSP 1 Score: 592.808 bits (1527), Expect = 0.000e+0
Identity = 301/581 (51.81%), Postives = 399/581 (68.67%), Query Frame = 0
Query:   78 EKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAE-NKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASLGVDSGLPDGE---FLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
            E + + VG + +  ETGKI R A G+V VR GET+V+++ACA  N     DF PLR+DY E+FS+AG T G + KR+GR ++REILV+RLIDRPLRPM  E +  E QVLS+V+SYDGVH+ +P+AIC ASAA+V+S IPL  PV  V+VG  DG+ +VNPT ++   S L+LM+AGTE+ +LMIEG+ +FL EE +L+A+ +GH AI  IC AL +W AKVGKPK    L   P EL   +++  A  ++ AL+ G +     SL  +  ++  +      LP GE   +  +D+    K++  + M  M+     R+DGR  +++RPI IE  +LP  HGS LFTRGETQAL   TLG + M+QR E L+G  S+RFYLQY FPP SVGEVGR+GAPGRREIGHG LAERAL+ +IP +E FPY +R+ES I ES GSSSMA+ CGG LALMD GVP+KR +AG+AMGL+L+   D  I+L+DILG+EDA G MDFK+ GD +G+T FQ+DIK  G+T   +  AL+QAK+GR+HIL  M    P  + +M     RI  V+I PS I  +IGP G+Q+
Sbjct:    4 ETISISVGEQEITLETGKIARQAGGAVIVRCGETIVFSTACAAPNADPTTDFLPLRVDYQEKFSSAGKTLGGFIKREGRPAEREILVSRLIDRPLRPMFEEGYYNEVQVLSYVWSYDGVHSPDPLAICGASAALVISDIPLIKPVGAVRVGFSDGQFIVNPTVEQQKKSKLDLMLAGTEDAVLMIEGSCDFLTEEQVLEAIEQGHQAIKGICHALSQWQAKVGKPKNRETLRKLPAELYEDVEKIAAPLLEQALRIGEKKKREESLGLVTQAVKEAF-----LPAGEEPKYPEKDVTYALKEISSKMMRRMILNENLRSDGRQSTQIRPIDIEQSMLPRAHGSSLFTRGETQALAVCTLGGESMAQRYEDLEGEGSQRFYLQYFFPPFSVGEVGRLGAPGRREIGHGKLAERALMALIPPKEQFPYTIRLESNITESNGSSSMATVCGGCLALMDAGVPIKRPVAGIAMGLILEN--DRYIILSDILGIEDALGDMDFKVTGDQQGITAFQMDIKVEGITIEIMRAALQQAKDGRVHILNKMLSVVPKYKEQMSRYAPRIETVQIKPSKIATVIGPGGKQI 577          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|219119866|ref|XP_002180684.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408157|gb|EEC48092.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 592.038 bits (1525), Expect = 0.000e+0
Identity = 302/573 (52.71%), Postives = 396/573 (69.11%), Query Frame = 0
Query:   89 LAFETGKIGRSADGSVTVRQGETVVYASACAENKP-QELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVG-RVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSG-NRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDE----AVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
            +  ETGKIGR A G+VT+ +G++V+YA+   +  P +E+DF PL +DY ERFS+AG+TSG Y KRDGR ++ EIL  RLIDRPLRP++   W  ETQ+LSWV SYDG  + +P+AI A+++++ +S +PL  PVA VQVG + DG LVVNPT  +M  S LNLMVAGTEE +LMIEGAA+FLPE  ++ A++ GH AI  +C+ L   G   GK K+L  +   P  L+  + E ++  ID    SG  + A    +  +  ++V  L  D     GE +A  +K  FK L+ +RM         R DGRGP+++R +++E G+LP  HGS LFTRGETQ + T TLG  GM Q+ E LDG+D KRFYLQY+FPPS VGE GRVGAPGRRE+GHGNLAERAL+P IP+  DFPY +RVES+I ES GSSSMAS CGGSLALMD GVP+K  +AG+AMG+LL +    + +  ++L+DILG EDA GTMDFK+ GD  G++TFQLDIKC GLT  T+E AL QA+ GRLH+L  ME+   +PR E+   V ++    I    IGK+IGP G+Q+
Sbjct:   90 ICIETGKIGRQAAGAVTLTRGDSVLYATTSHDKDPKEEIDFCPLSVDYQERFSSAGLTSGGYNKRDGRPAEHEILTCRLIDRPLRPLIQSGWRHETQLLSWVLSYDGERSCDPLAIIASASSLFISDVPLHKPVAAVQVGMKDDGTLVVNPTNLQMETSKLNLMVAGTEEAVLMIEGAADFLPESTMIQAVKTGHEAIQVLCQGLTALGKVAGKEKKLDTIKATPENLQIRVDELFSDRIDDMWSSGLGKEAQGKIMTDLYTAVVGELIEDY---PGETVA--IKGAFKDLLCRRMFFRAREEGLRCDGRGPTDIRQLTMETGLLPRVHGSALFTRGETQCVATTTLGGSGMRQKIEKLDGTDEKRFYLQYTFPPSCVGETGRVGAPGRREVGHGNLAERALIPTIPALADFPYTIRVESLITESHGSSSMASVCGGSLALMDAGVPIKAPVAGIAMGMLLGDKGGVSDENAVILSDILGTEDALGTMDFKVAGDRVGISTFQLDIKCEGLTLETMESALEQARTGRLHLLSEMEKVIASPREELPATVPKMMSFSIPVEAIGKIIGPGGKQI 657          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|751308770|ref|WP_041016843.1| (polyribonucleotide nucleotidyltransferase [Criblamydia sequanensis] >gi|678277077|emb|CDR33336.1| polyribonucleotide nucleotidyltransferase [Criblamydia sequanensis CRIB-18])

HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0
Identity = 299/575 (52.00%), Postives = 400/575 (69.57%), Query Frame = 0
Query:   82 VEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASLGVDSGLPDGEFLARDLKVE--FKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
            VEV GK ++FETGKI + A+GSV VR GET+V+ +A A       DF PLR+DY E FS+AG T G + KR G+++ +EILV+RLIDRP+RPM  E +  E Q+LS+V+SYDGV   EP+AICAASAA+ +S IPL  P+AGV+VG V GR V+NPT  EM+ S L+LM+AGTEE +LMIEG A++L EE +L A+  GHAAI  I + +++W  ++GKPK L  L   P E    +       +  AL+   +     +L  I+   +A+L  +      + L   + VE   K L  + M  M+     R+DGR P ++RPI IE+  LP  HGS +FTRGETQAL   TLG   M+QR ESL+G DS++FYLQY FPP SVGE GR+G PGRRE+GHG LAER+L+P +PS+E+FPY +R+ES I ES GSSSMAS CGG LA+MD GVP+KR +AG+AMGL+L++  D+ +VL+DILG+EDA G MDFK+ GD EG+T FQ+DIK  G++   ++ AL QAK+GR+HIL+IM  ACP+ +A M  +  RI  +KI PS IG++IGP G+++
Sbjct:    8 VEVDGKTISFETGKIAKQANGSVLVRSGETIVFCAAVAAKTVGTTDFFPLRVDYQENFSSAGKTVGGFIKRQGKSTQKEILVSRLIDRPIRPMFPEGYYNEVQLLSYVWSYDGVVAPEPLAICAASAALSISDIPLLKPIAGVRVGLVGGRFVINPTIAEMSESKLDLMIAGTEEAVLMIEGYADYLTEEEVLKAIETGHAAIKIIAQGIKKWQEEIGKPKVLDQLITIPQETINAVNSLGKDKLRKALRINKKQEREIALGAIKADTLAALCTELNDNSEDPLHDPVYVEKAHKMLESEMMREMILEESVRSDGRSPFDIRPIDIELSFLPRAHGSGIFTRGETQALAVCTLGGDSMAQRFESLEGEDSEKFYLQYFFPPFSVGETGRMGPPGRREVGHGKLAERSLMPTLPSKEEFPYVIRLESNITESNGSSSMASVCGGCLAMMDAGVPIKRPVAGIAMGLILEK--DKYVVLSDILGIEDALGDMDFKVSGDKEGITAFQMDIKVEGISIEIMKTALLQAKKGRIHILEIMLSACPSHKA-MSRHAPRIETIKIKPSKIGEVIGPGGKKI 579          
BLAST of EWM22313.1 vs. NCBI_GenBank
Match: gi|692304794|ref|WP_032125738.1| (MULTISPECIES: polyribonucleotide nucleotidyltransferase [Chlamydiia] >gi|971148014|emb|CUI17019.1| Polyribonucleotide nucleotidyltransferase [Protochlamydia naegleriophila])

HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0
Identity = 300/581 (51.64%), Postives = 396/581 (68.16%), Query Frame = 0
Query:   78 EKMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAE-NKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGRVDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADICRALREWGAKVGKPKRLGDLCLAPPELKPLLQERYAKAIDAALKSGNRNAYSASLHGIEDSIVASLGVDSGLPDGE---FLARDLKVEFKKLVKQRMALMVAAGRGRADGRGPSEVRPISIEMGVLPTPHGSVLFTRGETQALVTVTLGNKGMSQRTESLDGSDSKRFYLQYSFPPSSVGEVGRVGAPGRREIGHGNLAERALLPVIPSEEDFPYALRVESMIMESCGSSSMASACGGSLALMDCGVPLKRHIAGVAMGLLLDEAVDEPIVLTDILGLEDAFGTMDFKICGDAEGVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACPAPRAEMRGNVMRISQVKINPSFIGKLIGPQGRQV 654
            E + V+VG + + FETGKI R A G+V VR GET+V+ SACA      E DF PLR+DY E+FS+AG T G + KR+GR ++REILV+RLIDRPLRPM  E +  E Q+LS+V+SYDGVH+ EP+AIC ASAA+V+S  PL  PV  V+VG +DGR VVNPT ++   S L+LM+AGTEE +LMIEG  +FL EE +L+A+  GH +I  IC+AL +W  KVGK K    L L P EL   ++      +++AL+   +     +L  +  ++      DS +P G+   + A+ +    K +  + M  M+     R+DGR  +E+R I +E  +LP  HGS LFTRGETQA+   TLG  GM+QR E L+G  ++RFYLQY FPP SVGEVGR+GAPGRRE+GHG LAERAL+ VIP +E FPY +RVES I ES GSSSMA+ CGG LALMD GVP+KR ++G+AMGL+L+   D  I+L+DILG+EDA G MDFK+ GD +G+T FQ+DIK  G+T   +  AL+QAK+GR+HIL  M   CP  + EM     RI  ++I PS I  +IGP G+Q+
Sbjct:    4 ETISVQVGAQEIVFETGKIARQAGGAVVVRCGETIVFTSACAAPTADPETDFFPLRVDYQEKFSSAGKTLGGFIKREGRPTEREILVSRLIDRPLRPMFEEGYYNEVQILSYVWSYDGVHSPEPLAICGASAALVISDAPLIKPVGAVRVGFIDGRFVVNPTIEQQKLSKLDLMLAGTEEAVLMIEGFCDFLTEEQVLEAIETGHKSIKVICQALEQWKTKVGKAKNRETLRLLPKELYNDIEAIANPLLESALRIQQKQKREEALANVAKAV-----NDSLMPAGQEPKYPAQHISYALKDISSKMMRRMILNENLRSDGRKSTEIRQIDVEQSLLPRVHGSSLFTRGETQAVAVCTLGGAGMAQRFEDLEGEGNQRFYLQYFFPPFSVGEVGRIGAPGRREVGHGKLAERALMAVIPPKEQFPYTIRVESNITESNGSSSMATVCGGCLALMDAGVPVKRPVSGIAMGLILEG--DRYIILSDILGIEDALGDMDFKVTGDHQGITAFQMDIKVEGITIDIMRAALQQAKDGRIHILNKMLAVCPTFKGEMSRYAPRIETIQIKPSKIATVIGPGGKQI 577          
The following BLAST results are available for this feature:
BLAST of EWM22313.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102808|gb|EWM22313.1|0.000e+0100.00polyribonucleotide nucleotidyltransferase [Nannoch... [more]
gi|1210527221|dbj|GAX13856.1|0.000e+050.24polyribonucleotide nucleotidyltransferase [Fistuli... [more]
gi|1210524146|dbj|GAX16875.1|0.000e+053.05polyribonucleotide nucleotidyltransferase [Fistuli... [more]
gi|1072231647|gb|OEU16379.1|0.000e+047.43polyribonucleotide nucleotidyltransferase [Fragila... [more]
gi|1084490933|gb|OGN54522.1|0.000e+052.14polyribonucleotide nucleotidyltransferase [Chlamyd... [more]
gi|1084488951|gb|OGN52731.1|0.000e+052.14polyribonucleotide nucleotidyltransferase [Chlamyd... [more]
gi|1057061695|ref|WP_068467891.1|0.000e+051.81polyribonucleotide nucleotidyltransferase [Parachl... [more]
gi|219119866|ref|XP_002180684.1|0.000e+052.71predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|751308770|ref|WP_041016843.1|0.000e+052.00polyribonucleotide nucleotidyltransferase [Criblam... [more]
gi|692304794|ref|WP_032125738.1|0.000e+051.64MULTISPECIES: polyribonucleotide nucleotidyltransf... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8387rna8387Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications