EWM29838.1, cds836 (CDS) Nannochloropsis gaditana

Overview
NameEWM29838.1
Unique Namecds836
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:532460..532508 +
Alignment locationCM002456.1:532621..532714 +
Alignment locationCM002456.1:532944..534138 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29838.1
Productsorting and assembly machinery component 50 putative
Orig transcript idgnl|cribi|Naga_100017g27.336.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:532460..532508 +
CM002456.1supercontigCM002456.1:532621..532714 +
CM002456.1supercontigCM002456.1:532944..534138 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0019867outer membrane
Vocabulary: INTERPRO
TermDefinition
IPR000184Bac_surfAg_D15
Homology
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|585112419|gb|EWM29838.1| (sorting and assembly machinery component 50 putative [Nannochloropsis gaditana])

HSP 1 Score: 914.45 bits (2362), Expect = 0.000e+0
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0
Query:    1 MVRADTPLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATGLSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPLTSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHIG 445
            MVRADTPLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATGLSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPLTSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHIG
Sbjct:    1 MVRADTPLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATGLSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPLTSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHIG 445          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|669162792|ref|XP_008616958.1| (hypothetical protein SDRG_12658 [Saprolegnia diclina VS20] >gi|530731412|gb|EQC29654.1| hypothetical protein SDRG_12658 [Saprolegnia diclina VS20])

HSP 1 Score: 296.204 bits (757), Expect = 1.830e-92
Identity = 180/453 (39.74%), Postives = 240/453 (52.98%), Query Frame = 0
Query:    3 RADTPLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWS------APLTSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHI 444
            R   PLRI +V V GNKRT P + E ELQ AY AS+  GV   L  A   L+NL IF+ VDI +  A      E D+ I V E G+ S Y G +    +     + +L NP GHAE +E + S  + G+ + K +  KP+  GL    +     + LNH+R SS  E+ +     LT    RH L+  L  RDI+P R+   P  Y AS SIM EA PS KS  +Y + DD+++D+ LP++G      LE+AG+  GDV +VK EV    H P+G        L+  LS  VG V+         G +     R SDR+ LGG  TLRGF + GVGPRA   +GG   GD+LGG+F Y A  +L  P PLPLL   G+R HVF +AG+L+ W       A + ++LS+ R A G G+ +     R E NYS  +K    D  +R Q GL  H 
Sbjct:    5 RESPPLRIRQVTVRGNKRTSPEIFEHELQAAYAASSFAGVAESLNHAAEELRNLSIFESVDILIDTAPGGNRNEADVTITVKELGMASVYAGVNSDGHEGTANTTCTLTNPLGHAERIELSASHGQFGSDTQKASYHKPKFLGLPLWLNANAVNEVLNHDRFSSYHERFRGGTVSLTDDESRHELALNLGWRDIVPVRNKKIPSTYAASPSIMAEAEPSTKSSIKYVYNDDQRNDTALPTAGRLLRTSLEVAGL-WGDVNFVKGEVEVQRHYPIGPVAYNHPILNLSLSSRVGAVKSY-------GSDRHQPARISDRFFLGGPLTLRGFNHKGVGPRANPDDGGVATGDALGGEFYYSACASLGFPFPLPLLAILGVRGHVFCNAGSLMSWDRVLDERAWMKNLLSETRAAAGVGVVMGTRFGRFEANYSWVLKSLAGDRVKRAQLGLGLHF 449          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|1173955545|gb|OQS02496.1| (sorting and assembly machinery component 50 [Thraustotheca clavata])

HSP 1 Score: 287.345 bits (734), Expect = 4.736e-89
Identity = 176/453 (38.85%), Postives = 235/453 (51.88%), Query Frame = 0
Query:    3 RADTPLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPL------TSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHI 444
            R   PLRI  V V GNKRT P + E ELQ AY A++  GV   L  A   L+NL IF+ VD+ + +AA     E D+ I V E  + + Y G      +     + +L NP GHAE +E + +  + G+   K +  KP+  GL    +     +  NH+R SS  EK +     LT    RH L++ L  RDI+P R+   P  Y AS SIM EA PS KS  +Y + DD+++DS LP+SG      LE+AG+  GDV +VK EV    H P+G        L+  LS  +G V+         G ++    R SDR+ LGG  TLRGF + GVGPRA   +GG   GD+LGG+  Y A  +L  P P+PLL   G+R HVF +AG+L  W   L       ++L D R A G G+ I     R E NYS  +K    D  +R Q GL  H 
Sbjct:    5 RGGPPLRIRNVIVRGNKRTSPELFERELQSAYAATSFAGVTESLNHAAEELRNLNIFESVDVLIDKAAGGDRHEADVTITVKESRMMTLYAGVDSDGYEGTANTTCTLTNPLGHAERIELSAAHGQYGSDVQKASYHKPKFLGLPLWLNANAVNEMQNHDRFSSYHEKFRGGTMSLTDDENRHELAFNLGWRDIVPIRNKKIPSTYAASPSIMAEAEPSTKSSVKYVYNDDQRNDSALPTSGRLLRTSLEVAGL-WGDVNFVKGEVEVQRHYPIGPIAYNHPFLNLSLSSRLGAVKSY-------GSDKQQPARISDRFFLGGPLTLRGFNHKGVGPRANPDDGGVATGDALGGEIFYSACASLGFPFPVPLLALLGVRGHVFCNAGSLFGWDRVLDEQNWMKNLLQDSRAAAGVGIVIGTRFGRFEANYSWVLKSLAGDRVKRAQLGLGMHF 449          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|953487108|emb|CEG49170.1| (sorting and assembly machinery component 50 putativ [Plasmopara halstedii])

HSP 1 Score: 286.96 bits (733), Expect = 8.214e-89
Identity = 175/446 (39.24%), Postives = 245/446 (54.93%), Query Frame = 0
Query:    7 PLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATGLSAHL-----SGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPL------TSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLA 441
            P+ IG+VF+EGN RT+P V E ELQ+AY A  +  +   L++A   L+ L IF  + I++ EA+S    ETD+ I V EKG  S + G +   +D   E+S +L N  G AE +  + + +R G+ + +    KPR  GL          +  NHE  SS +EK++A +  ++ +   H LS+ +  RD+LPRR    P AY AS SI+ EA PS K+  +Y FTDD +D+ V P++G  F    E+AG+  GDV +VKAEV G  H  LG   L   L     SG +G V+         G E+    R SDR+ LGG   LRGF + G+GPRA   +GG  +GD+LGGD  Y  T ++  P+ LPLL   GLR   FA+AGNL  W   L       +++ D RV+ G GL     + R+E NYS  +K    D  +R Q GL+
Sbjct:   18 PMHIGKVFLEGNDRTKPEVFETELQEAYNAEHIGDLVHKLEEATNELKALDIFDTISIKLDEASSGERDETDVTITVKEKGWRSLHVGATTDGNDEAGESSLTLLNAFGEAEKISLSATYARSGSNTQRATFKKPRFWGLPLYLSAVGTNELHNHEWLSSYNEKIRAGSISISDYEGVHDLSFNVGWRDLLPRRDPKIPTAYRASPSILAEAMPSTKTSVKYVFTDDNRDNIVYPTTGGLFKYSTEIAGL-AGDVKFVKAEVEGQKHFALGPLFLGFPLLNFSFSGHMGTVKSY-------GSEQHRPVRISDRFFLGGPMNLRGFNHKGIGPRASPLDGGVAQGDALGGDVSYHGTASVGFPVMLPLLAALGLRGQFFANAGNLTTWDRVLDEKKWMKNLVDDTRVSIGIGLVWGTRIGRLEANYSWILKSLNHDNIKRAQLGLS 455          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|1173948169|gb|OQR96321.1| (sorting and assembly machinery component 50 [Achlya hypogyna])

HSP 1 Score: 285.804 bits (730), Expect = 1.649e-88
Identity = 180/455 (39.56%), Postives = 239/455 (52.53%), Query Frame = 0
Query:    2 VRAD-TPLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPL------TSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHI 444
            VR D  PLR+  V V GNKRT P + E +LQ  Y AS+  GV   L  A   L+NL IF+ VDI + +A      E D+ I V E  + S Y G +    +     + +L NP GHAE +E + S  + G+   K +  KP+  GL    +     + +NHER SS  E+ +     LT  N RH LS  L  RDI+P R+   P  Y AS SIM EA PS KS  +Y + DD+++D+ LP++G      LE+AG+  GDV +VK EV    H P+G T      L+  LS  VG V+         G +     R SDR+ LGG  TLRGF + GVGPRA   +GG   GD+LGG+  Y A  +L  P P+PLL   GLR HVF +AG+L+ W   L      T++L + R A G G+ +     R E NYS  +K    D  +R Q GL  H 
Sbjct:    3 VRRDGPPLRVRNVVVRGNKRTSPELFEQQLQATYAASSFAGVTESLNHAAQELRNLNIFESVDILIDKAPGGDRHEADVTITVKELRMASLYAGVNSDGHEGTATTTCTLTNPLGHAERIELSASHGQYGSDVQKASYHKPKFLGLPLWLNADAVNEVINHERFSSYHERFRGGTVSLTDENNRHELSMNLGWRDIVPVRNKKIPSTYAASPSIMAEAEPSTKSSVKYVYNDDQRNDAALPTAGRLLRTSLEVAGL-WGDVNFVKGEVEMQRHYPIGPTAFNHPILNLSLSSRVGAVKSY-------GADRHQPARISDRFFLGGPLTLRGFNHKGVGPRANPDDGGVATGDALGGEVYYSACASLGFPFPVPLLALLGLRGHVFCNAGSLMGWDRILDEQNWMTNLLGESRAAAGVGIVMGTRFGRFEANYSWVLKSLAGDRVKRAQLGLGLHF 449          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|675205277|ref|XP_008911523.1| (hypothetical protein PPTG_16025 [Phytophthora parasitica INRA-310] >gi|566014759|gb|ETI37670.1| hypothetical protein F443_16407 [Phytophthora parasitica P1569] >gi|567952255|gb|ETK77935.1| hypothetical protein L915_15945 [Phytophthora parasitica] >gi|567980918|gb|ETL31368.1| hypothetical protein L916_15841 [Phytophthora parasitica] >gi|568010399|gb|ETL84587.1| hypothetical protein L917_15640 [Phytophthora parasitica] >gi|568040268|gb|ETM37728.1| hypothetical protein L914_15775 [Phytophthora parasitica] >gi|568088117|gb|ETN02979.1| hypothetical protein PPTG_16025 [Phytophthora parasitica INRA-310] >gi|570318516|gb|ETO66464.1| hypothetical protein F444_16376 [Phytophthora parasitica P1976] >gi|570942321|gb|ETP07578.1| hypothetical protein F441_16236 [Phytophthora parasitica CJ01A1] >gi|570972828|gb|ETP35606.1| hypothetical protein F442_16250 [Phytophthora parasitica P10297] >gi|970628583|gb|KUF76139.1| SAM50 protein SPAC17C9.06 [Phytophthora nicotianae])

HSP 1 Score: 282.722 bits (722), Expect = 3.521e-87
Identity = 174/446 (39.01%), Postives = 247/446 (55.38%), Query Frame = 0
Query:    8 LRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAE--TLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPL------TSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGL 440
            + IG+VF++GN+RT+P V E+ELQ+ Y A  +  + R L++A   L+ L IF+ ++I++ EA+S    ETD+ I V EKG  S + G +    D   E++ +L N  G AE  TL  TY+RS  G+ + +    KPR  GL          +  N E  SS SEK++A +  ++ +   H LS  +  RD+LPRR    P AY AS SI+ EA PS K+  +Y FTDD +++ V P++G  F    E+AG+ VGDV +VKAEV G  H  +G        L+  LS  +G V+  G        E+    R SDR+ LGG   +RGF + G+GPRA   +GG  +GD+LGGD  Y  T ++  P+PLPL    GLR  +FA+AGNL  W   L       ++  D RV+ G GL     + R+E NYS  +K    D  +R Q GL
Sbjct:   23 MHIGKVFLKGNERTKPEVFENELQEVYSAERIGHLVRKLEEATEELKALDIFESINIELDEASSGERDETDITITVKEKGWRSLHVGATTDGSDEAGESTLTLSNALGEAEKITLSATYARS--GSNTQRATFKKPRFLGLPLYLSAIGTNELHNQEWLSSYSEKIRAGSISISDYEGVHDLSLNVGWRDLLPRRDSKIPTAYRASPSILAEAMPSTKTSVKYVFTDDNRNNVVYPTAGGLFKYTTEIAGL-VGDVKFVKAEVEGQKHVAVGPAVFGFPILNFSLSCHLGTVKSYG-------SEQHRPARISDRFFLGGPMNVRGFNHKGIGPRASPLDGGVAQGDALGGDVSYNGTASVGFPVPLPLFAALGLRGQLFANAGNLTTWDRLLDEKKWMKNLADDTRVSVGVGLVWGTRIGRLEANYSWILKAHDHDNIKRAQLGL 458          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|813192520|ref|XP_012208142.1| (hypothetical protein SPRG_12924 [Saprolegnia parasitica CBS 223.65] >gi|641526810|gb|KDO21143.1| hypothetical protein SPRG_12924 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 275.789 bits (704), Expect = 1.438e-84
Identity = 175/458 (38.21%), Postives = 235/458 (51.31%), Query Frame = 0
Query:    3 RADTPLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPR-APQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDK----FGLRWHVFADAGNLLPWS------APLTSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHI 444
            R   PLRI +V V GNKRT P + E ELQ AY AS+  GV   L  A   L+NL IF+ VDI +  A      E D+ I V E G+ S Y G +    +     + +L NP GHAE +E + S  + G+ + K +  KP+  GL    +     + LNH+R SS  E+ +     LT    RH L+  L  RDI+P R+   P  Y AS SIM EA PS KS  +Y + DD+++D+ LP++G      +E+AG+  GDV +VK EV    H P+G        L+  LS  VG V+         G +     R SDR+ LGG  TLRGF + GVG R A   +GG   GD+LGG+F Y A  +L  P PLPLL       G     F +AG+L+ W       A + ++LS+ R A G G+ +     R E NYS  +K    D  +R Q GL  H 
Sbjct:    5 RESPPLRIRQVIVRGNKRTSPEIFEHELQAAYAASSFAGVAESLNHAAEELRNLSIFESVDILIDTAPGGNRNEADVTITVKELGMASVYAGVNSDGHEGTANTTCTLTNPLGHAERIELSASHGQFGSDTQKASYHKPKFLGLPVWLNANAVNEVLNHDRFSSYHERFRGGTVSLTDDESRHELALNLGWRDIVPVRNKKIPSTYAASPSIMAEAEPSTKSSIKYVYNDDQRNDAALPTAGRLLRTSMEVAGL-WGDVNFVKGEVEVQRHYPIGPVAYNHPILNLSLSSRVGAVKSY-------GADRHQPARISDRFFLGGPLTLRGFNHKGVGSRGANPDDGGVATGDALGGEFYYSACASLGFPFPLPLLASTPIDLGCPRPCFCNAGSLMSWDRVLDERAWMKNLLSETRAAAGVGVVMGTRFGRFEANYSWVLKSLAGDRVKRAQLGLGLHF 454          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|673015696|ref|XP_008861809.1| (hypothetical protein H310_00714 [Aphanomyces invadans] >gi|574483407|gb|ETW10398.1| hypothetical protein H310_00714 [Aphanomyces invadans])

HSP 1 Score: 271.552 bits (693), Expect = 5.979e-83
Identity = 169/449 (37.64%), Postives = 233/449 (51.89%), Query Frame = 0
Query:    7 PLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPL------TSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHI 444
            PL+I  V V GNKRT P++ E+ELQ AY A+T  GV   L  A   L+  GIF  VDI + ++A  A  ETD+ I V E  + S Y G   +  +       +L NP GHAE +E + +  + G+     +  +P+  G    F      +   HER SS  EK +     ++ +N  H L++ L  RDI+P R+   P  Y AS SIM EA PS KS  +Y F DD+++DS LP+SG       E+AG+  GDV + K E     + P+G         +  LS  +G V          G ++    R SDR+ LGG  +LRGF + GVGPRA   +GG + GDSLGG+  Y    +L  P PLPLL   G+R HVFA+AG ++ W+  L       ++L D R A G GL ++    R+E NYS  +K    D  +R Q GL  H 
Sbjct:   13 PLKIRNVTVRGNKRTSPTLFENELQRAYAATTFGGVMESLNAAAVELRAFGIFDSVDIFVDKSADGAHNETDVIITVKESRMLSLYAGVESSGVEGTANTKLTLTNPLGHAEQVELSAAHGQYGSDGQNFSYRRPKFLGRPWWFTATAANEVQVHERFSSFREKFRGGTVSISDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAVPSTKSSVKYTFNDDQRNDSTLPTSGRLLRVSAEVAGL-WGDVHFTKGEAEIQHNFPIGPIAFNNPIFNIMLSSRLGAVHSY-------GADKDRPARISDRFFLGGPLSLRGFNHKGVGPRANPDDGGVVTGDSLGGEVFYSVGASLGFPFPLPLLAMLGVRGHVFANAGTVMGWNRVLDEKNWMKNILDDTRAAAGVGLVVATRFGRLEANYSWVLKSLQGDRVKRAQIGLGMHF 453          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|301117374|ref|XP_002906415.1| (sorting and assembly machinery component 50 [Phytophthora infestans T30-4] >gi|262107764|gb|EEY65816.1| sorting and assembly machinery component 50 [Phytophthora infestans T30-4])

HSP 1 Score: 266.159 bits (679), Expect = 8.408e-81
Identity = 176/446 (39.46%), Postives = 249/446 (55.83%), Query Frame = 0
Query:    8 LRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAE--TLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWSAPL------TSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGL 440
            + IG+VF++GN+RT+P V E+ELQ+AY A  +  + R L++A   L+ L IF+ +DI++ +A+S    ETD+ I V EKG  S + G +    D   E++ +L N  G AE  TL  TY+RS  G+ + +    KPR  GL          +  N E  SS SEK++A +  ++ +   H LS  +  RD+LPRR    P AY AS SI+ EA PS K+  +Y FTDD +++ V P++G  F    E+AG+ VGDV +VKAEV G  H  +G        L+  LS  +G V+  G        E+    R SDR+ LGG   +RGF + G+GPRA   +GG  +GD+LGGD  Y  T ++  P+PLPLL   GLR  +FA+AGNL  W   L       ++  D RV+ G GL     + R+E NYS  +K    D  +R Q GL
Sbjct:   23 IHIGKVFLKGNERTKPEVFENELQEAYSAKRIGRLVRNLEEATEELKALDIFESIDIKLDKASSGERDETDITITVKEKGWRSLHVGATTDGSDEAGESTLTLSNALGEAEKITLSATYARS--GSNTQRATFKKPRFLGLPLYLSAIGTNELHNQEWLSSYSEKIRAGSISISDYEGVHDLSLNVGWRDLLPRRDAKVPTAYRASPSILAEAMPSTKTSVKYVFTDDNRNNVVYPTAGGLFKYTTEIAGL-VGDVKFVKAEVEGQKHVAVGPNVFGFPILNFSLSCHLGTVKSYG-------NEQHRPARISDRFFLGGPMNVRGFNHKGIGPRASPLDGGVAQGDALGGDVSYNGTASVGFPVPLPLLAALGLRGQLFANAGNLTTWDRLLDEKKWMKNLADDTRVSIGLGLVWGTRIGRLEANYSWILKAHDHDNIKRAQLGL 458          
BLAST of EWM29838.1 vs. NCBI_GenBank
Match: gi|698789176|ref|XP_009827620.1| (hypothetical protein H257_04711 [Aphanomyces astaci] >gi|574117467|gb|ETV82949.1| hypothetical protein H257_04711 [Aphanomyces astaci])

HSP 1 Score: 256.144 bits (653), Expect = 5.159e-77
Identity = 168/449 (37.42%), Postives = 233/449 (51.89%), Query Frame = 0
Query:    7 PLRIGRVFVEGNKRTEPSVIEDELQDAYRASTVQGVHRGLQKANYNLQNLGIFKGVDIQMQEAASKAPGETDLHIKVIEKGVFSAYTGTSFTRDDINFEASGSLRNPTGHAETLEGTYSRSRQGNRSLKVNLGKPRVRGLNTRFDCQIHEDTLNHERTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAGVGVGDVAYVKAEVAGAAHKPLGATG-----LSAHLSGSVGVVRPTGWRAREGGVEEAPRTRFSDRYMLGGLQTLRGFGYSGVGPRAPQREGGALKGDSLGGDFKYVATVALTAPLPLPLLDKFGLRWHVFADAGNLLPWS------APLTSMLSDMRVACGTGLAISLGMARVEMNYSVPVKKEMKDFEQRWQFGLAAHI 444
            PL+I  V V GNKRT P++ ++ELQ AY A+T  GV   L  A   L+  GIF  VDI +++ A     ETD+ I V E  + S Y G   +  +       +L NP GHAE +E + +  + G+     +  +P+  G    F      +   HER SS  EK +     ++ +N  H L++ L  RDI+P R+   P  Y AS SIM EA PS KS  +Y + DD+++D  LP+SG       E+AG+  GDV +VK E     + P+G         +  LS  VG V          G ++    R SDR+ LGG  +LRGF + GVGPRA   +GG   GD+LGG+  Y    +L  P PLPLL   G+R HVFA+AG+LL W+      A + ++L D R A G G+ I+    R+E NYS  +K    D  +R Q GL  H 
Sbjct:   13 PLKIRNVTVRGNKRTSPTLFDNELQSAYSATTFGGVMESLNAAALELRAFGIFDSVDILLEKTADGTRNETDVVITVKESRMLSLYAGVESSGAEGTANTKCTLTNPLGHAEKIELSAAHGQYGSDGQNFSYRRPKFLGRPWWFTASAANEVQVHERFSSFREKFRGGTVSVSDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAVPSTKSSVKYTYNDDQRNDPTLPTSGRLLRASAEVAGL-WGDVQFVKGEAEVQHNIPIGPVAFHHPIFNIMLSSRVGAVHSY-------GTDKLRPARISDRFFLGGPLSLRGFNHKGVGPRANPDDGGVKTGDALGGEVFYSVGASLGFPFPLPLLALLGVRGHVFANAGSLLAWNRILDEKAWIKNILDDSRAAAGVGVVIATRFGRLEANYSWVLKALPGDRVKRAQIGLGLHF 453          
The following BLAST results are available for this feature:
BLAST of EWM29838.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112419|gb|EWM29838.1|0.000e+0100.00sorting and assembly machinery component 50 putati... [more]
gi|669162792|ref|XP_008616958.1|1.830e-9239.74hypothetical protein SDRG_12658 [Saprolegnia dicli... [more]
gi|1173955545|gb|OQS02496.1|4.736e-8938.85sorting and assembly machinery component 50 [Thrau... [more]
gi|953487108|emb|CEG49170.1|8.214e-8939.24sorting and assembly machinery component 50 putati... [more]
gi|1173948169|gb|OQR96321.1|1.649e-8839.56sorting and assembly machinery component 50 [Achly... [more]
gi|675205277|ref|XP_008911523.1|3.521e-8739.01hypothetical protein PPTG_16025 [Phytophthora para... [more]
gi|813192520|ref|XP_012208142.1|1.438e-8438.21hypothetical protein SPRG_12924 [Saprolegnia paras... [more]
gi|673015696|ref|XP_008861809.1|5.979e-8337.64hypothetical protein H310_00714 [Aphanomyces invad... [more]
gi|301117374|ref|XP_002906415.1|8.408e-8139.46sorting and assembly machinery component 50 [Phyto... [more]
gi|698789176|ref|XP_009827620.1|5.159e-7737.42hypothetical protein H257_04711 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna836rna836Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications