EWM22325.1, cds8351 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22325.1 vs. NCBI_GenBank
Match: gi|585102822|gb|EWM22325.1| (putative zinc ring finger protein [Nannochloropsis gaditana]) HSP 1 Score: 1135.17 bits (2935), Expect = 0.000e+0 Identity = 563/563 (100.00%), Postives = 563/563 (100.00%), Query Frame = 0
Query: 1 MAAATESLFLVASNIHFSDDMSLPRFGTSTRLLAATCSCSSTPCAAHAATSVDQAASVEDGDALEPQDDVFYLSRLNDPTTYFFQWICKRYGLTVKAEPHSCPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRFANMSWRLGNTRATRVFSKPSWEALFCAGSGGAGNAGKCDVGDRASSPSCEAGEAPTGGGGSVGVTKGKGGKETGRGYVGPDIGGLPHRLLMRRAAKSVRRAFVSPDPDVGGSTRAELQRRWSMLMGGKATDSKQWKGGVAVLTEEAGAESVAGLTRRWGRGREGQGGQTEGMGSRWSDLIRQGRGKEGGVGGEEQAALTAWWREARGQESAEVGAAKVPTLAAAWSLLVPETPGSLAPWAVPTTDCGGLSVAALKARAQRLFLPPVLDATSDAGVGALAREEMQARWDACFLSSRATLPCLNAGGSDVEELAHRWGKLMGVDVGEEVGGKPWAALAARWEERSVVGADREGGDVGGLDSKTLKTQWATTNVGGKVRLTEEAGACGTEVLEGRWGMGREGNKHG 563
MAAATESLFLVASNIHFSDDMSLPRFGTSTRLLAATCSCSSTPCAAHAATSVDQAASVEDGDALEPQDDVFYLSRLNDPTTYFFQWICKRYGLTVKAEPHSCPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRFANMSWRLGNTRATRVFSKPSWEALFCAGSGGAGNAGKCDVGDRASSPSCEAGEAPTGGGGSVGVTKGKGGKETGRGYVGPDIGGLPHRLLMRRAAKSVRRAFVSPDPDVGGSTRAELQRRWSMLMGGKATDSKQWKGGVAVLTEEAGAESVAGLTRRWGRGREGQGGQTEGMGSRWSDLIRQGRGKEGGVGGEEQAALTAWWREARGQESAEVGAAKVPTLAAAWSLLVPETPGSLAPWAVPTTDCGGLSVAALKARAQRLFLPPVLDATSDAGVGALAREEMQARWDACFLSSRATLPCLNAGGSDVEELAHRWGKLMGVDVGEEVGGKPWAALAARWEERSVVGADREGGDVGGLDSKTLKTQWATTNVGGKVRLTEEAGACGTEVLEGRWGMGREGNKHG
Sbjct: 1 MAAATESLFLVASNIHFSDDMSLPRFGTSTRLLAATCSCSSTPCAAHAATSVDQAASVEDGDALEPQDDVFYLSRLNDPTTYFFQWICKRYGLTVKAEPHSCPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRFANMSWRLGNTRATRVFSKPSWEALFCAGSGGAGNAGKCDVGDRASSPSCEAGEAPTGGGGSVGVTKGKGGKETGRGYVGPDIGGLPHRLLMRRAAKSVRRAFVSPDPDVGGSTRAELQRRWSMLMGGKATDSKQWKGGVAVLTEEAGAESVAGLTRRWGRGREGQGGQTEGMGSRWSDLIRQGRGKEGGVGGEEQAALTAWWREARGQESAEVGAAKVPTLAAAWSLLVPETPGSLAPWAVPTTDCGGLSVAALKARAQRLFLPPVLDATSDAGVGALAREEMQARWDACFLSSRATLPCLNAGGSDVEELAHRWGKLMGVDVGEEVGGKPWAALAARWEERSVVGADREGGDVGGLDSKTLKTQWATTNVGGKVRLTEEAGACGTEVLEGRWGMGREGNKHG 563
BLAST of EWM22325.1 vs. NCBI_GenBank
Match: gi|298714491|emb|CBJ27513.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 124.79 bits (312), Expect = 2.385e-26 Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 0
Query: 69 DVFYLSRLNDPTTYFFQWICKRY--------GLTVKAEPHSCPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRFANMSWRL 167
DVF LSRLND T+YFF W CK+Y GL K E CPICL++ SI+L CGH+FCR CL +A M+SCALCR+ +DP+ LR +F QR N++ RL
Sbjct: 20 DVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRL 126
BLAST of EWM22325.1 vs. NCBI_GenBank
Match: gi|676378283|ref|XP_009032420.1| (hypothetical protein AURANDRAFT_70600 [Aureococcus anophagefferens] >gi|323456912|gb|EGB12778.1| hypothetical protein AURANDRAFT_70600 [Aureococcus anophagefferens]) HSP 1 Score: 72.7886 bits (177), Expect = 1.125e-9 Identity = 31/73 (42.47%), Postives = 40/73 (54.79%), Query Frame = 0
Query: 102 CPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRFANMSWRLGNTRATR 174
C IC T +I+L CGH FC CLK A +++C CR H LDPD LR + R SWR G T+ ++
Sbjct: 623 CTICFTTKYEAIRLRCGHAFCGGCLKRCASHDIAACPHCRAPHLLDPDALRAAMEKYRKEYRSWRTGATKGSK 695
BLAST of EWM22325.1 vs. NCBI_GenBank
Match: gi|551673761|ref|XP_005839636.1| (hypothetical protein GUITHDRAFT_57781, partial [Guillardia theta CCMP2712] >gi|428183799|gb|EKX52656.1| hypothetical protein GUITHDRAFT_57781, partial [Guillardia theta CCMP2712]) HSP 1 Score: 58.151 bits (139), Expect = 2.473e-7 Identity = 24/59 (40.68%), Postives = 33/59 (55.93%), Query Frame = 0
Query: 102 CPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRF 160
CP+C+ N + LSCGH FC C+ AAA SC +CRK L+ D ++ + RF
Sbjct: 4 CPVCMHVLNNPLVLSCGHRFCNSCVSAAAYFGQHSCPVCRKECVLNDDNIKIETLLGRF 62
BLAST of EWM22325.1 vs. NCBI_GenBank
Match: gi|1173956552|gb|OQS03312.1| (hypothetical protein THRCLA_04393 [Thraustotheca clavata]) HSP 1 Score: 63.5438 bits (153), Expect = 6.129e-7 Identity = 39/127 (30.71%), Postives = 64/127 (50.39%), Query Frame = 0
Query: 44 CAAHAATSVDQAASVEDGDALEPQDDVFYLSRLNDPTTYFFQWICKRYGLTVKAEP--HSCPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDP-----DVLRQQFQTQRFANM 163
C A T D++ ++ L+P Y+ +L T I + + +P CPICL ++ + LSC HTFC CL AAE +++C +CR+ ++DP D L QQF +R++++
Sbjct: 115 CKKFAKTLSDESETINSDLQLQPFYAGNYVDQLYSHTAKTTDRIIRALLPNMDNKPVEECCPICLYHFKSPVTLSCHHTFCWSCLAKAAEHHINACPMCRQVQSIDPRDYEIDGLLQQF-LKRYSHI 240 The following BLAST results are available for this feature:
BLAST of EWM22325.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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