EWM29806.1, cds835 (CDS) Nannochloropsis gaditana

Overview
NameEWM29806.1
Unique Namecds835
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:530794..532098 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29806.1
Productacyl- dehydrogenase
Orig transcript idgnl|cribi|Naga_100017g26.304.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:530794..532098 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0003995acyl-CoA dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR009100AcylCoA_DH/oxidase_NM_dom
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR009075AcylCo_DH/oxidase_C
IPR013786AcylCoA_DH/ox_N
Homology
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|585112387|gb|EWM29806.1| (acyl- dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
Query:    1 MYPQLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKKAMEGATGPAADAWYRSGGEFAKENGQSRL 434
            MYPQLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKKAMEGATGPAADAWYRSGGEFAKENGQSRL
Sbjct:    1 MYPQLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKKAMEGATGPAADAWYRSGGEFAKENGQSRL 434          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|1094574022|emb|SEO70531.1| (Acyl-CoA dehydrogenase [Aquisalimonas asiatica])

HSP 1 Score: 485.723 bits (1249), Expect = 1.125e-167
Identity = 236/402 (58.71%), Postives = 299/402 (74.38%), Query Frame = 0
Query:    4 QLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKK 405
            + S  +K L  KL AF+DE   P E  +++QHAE    W  P I++ LK KA+  GLWNLF+ E D Y +GL   EYA L E+MGRS +APE  NC+APDTGNMEVLA+YG    + QWL PL+EG IRS F MTEP VASSDATNI T  RREGDEYV+NGRKWWSSGA+D  C++A+V+GK D     +AP+H+Q S+++VP+ TPGVK+ RAL VFG+D APHGHAEV    VRVP SN++LGEG GF+IAQGRLGPGRIHHCMR+IG++ER L     RA +R AFG+ +A  G +++++A+ R+ ++QARLL L+AA  MDT  G K A++EIAMIKVVAP+    VVD AIQ  G MGVCQDT LA A+A +R+LR+ADGPD+VHM ++A+ E+ K
Sbjct:    3 EFSDRSKELQDKLLAFMDEHIYPNEAEFKKQHAE-GDHWSSPPILDELKAKAKAEGLWNLFLPESD-YGAGLTNFEYAPLCEIMGRSPMAPEVFNCSAPDTGNMEVLARYGTDEHKKQWLEPLLEGKIRSCFSMTEPAVASSDATNIETEIRREGDEYVINGRKWWSSGALDKHCKIAIVMGKNDP----SAPKHKQQSMILVPLDTPGVKIERALHVFGYDHAPHGHAEVHYDNVRVPASNMLLGEGRGFEIAQGRLGPGRIHHCMRSIGVAERALEAMVARAKSRNAFGQRLADMGGLRQEIARSRMEIEQARLLTLNAAHMMDT-VGNKVARREIAMIKVVAPNMACNVVDRAIQAFGAMGVCQDTFLASAYANLRTLRLADGPDEVHMESIAKLEIGK 397          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|1011962882|ref|WP_062769291.1| (acyl-CoA dehydrogenase [Tistrella mobilis] >gi|1011733565|gb|KYO49877.1| acyl-CoA dehydrogenase [Tistrella mobilis])

HSP 1 Score: 481.871 bits (1239), Expect = 3.553e-166
Identity = 235/401 (58.60%), Postives = 286/401 (71.32%), Query Frame = 0
Query:    5 LSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKK 405
            +SP A+ +  +L  F+D    PAE V+E QH     RW+ P IIE LK KAR  GLWNLF+   +   +GLN ++YA L EVMGRS +APE  NCNAPDTGNMEVL +YG    + QWL PL++G IRS F MTEP VASSDATNI +   R+GD+YV+NGRKWW+SGA DPRC++ + +GK         PRH Q S+++VPM TPGV VLR L VFG+DDAPHGHAEV    VRVP  N++LGEG GF+IAQGRLGPGRIHHCMR IGL+ER L L   RA  R AFGK +A  G  +  +AQ R+ +DQARLL L AAW MDT  G K A+ EIA IKVVAP+   +V+D AIQ+HGG GVCQD  LA+A+A  R+LR+ADGPD+VH  T+A+ EL K
Sbjct:    5 ISPRAQEIRERLIEFMDAYVYPAEAVFEEQHRASPDRWVTPPIIEELKAKARAAGLWNLFLPHSE-RGAGLNNLDYAPLCEVMGRSEIAPEVFNCNAPDTGNMEVLERYGTEEHKRQWLEPLLDGKIRSAFAMTEPMVASSDATNIESRIERDGDDYVINGRKWWTSGAPDPRCKILIFMGKT----RFDGPRHSQQSMILVPMDTPGVTVLRPLKVFGYDDAPHGHAEVLFENVRVPAENILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCKRAQQRTAFGKTLAEHGMTRHYIAQSRMEIDQARLLTLKAAWMMDT-VGNKNAKSEIAAIKVVAPNMATRVIDRAIQVHGGGGVCQDFFLAKAYAGARTLRLADGPDEVHQETIAKLELAK 399          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|504557063|ref|WP_014744165.1| (acyl-CoA dehydrogenase [Tistrella mobilis] >gi|388527288|gb|AFK52485.1| putative acyl-CoA dehydrogenase [Tistrella mobilis KA081020-065])

HSP 1 Score: 481.871 bits (1239), Expect = 4.232e-166
Identity = 235/401 (58.60%), Postives = 286/401 (71.32%), Query Frame = 0
Query:    5 LSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKK 405
            +SP A+ +  +L  F+D    PAE V+E QH     RW+ P IIE LK KAR  GLWNLF+   +   +GLN ++YA L EVMGRS +APE  NCNAPDTGNMEVL +YG    + QWL PL++G IRS F MTEP VASSDATNI +   R+GD+YV+NGRKWW+SGA DPRC++ + +GK         PRH Q S+++VPM TPGV VLR L VFG+DDAPHGHAEV    VRVPV N++LGEG GF+IAQGRLGPGRIHHCMR IGL+ER L     RA  R AFGK +A  G  +  +AQ R+ +DQARLL L AAW MDT  G K A+ EIA IKVVAP+   +V+D AIQ+HGG GVCQD  LA+A+A  R+LR+ADGPD+VH  T+A+ EL K
Sbjct:    5 ISPRAQEIRERLIEFMDAYVYPAEAVFEEQHRASPDRWVTPPIIEELKAKARAAGLWNLFLPHSE-RGAGLNNLDYAPLCEVMGRSEIAPEVFNCNAPDTGNMEVLERYGTEEHKRQWLEPLLDGKIRSAFAMTEPMVASSDATNIESRIERDGDDYVINGRKWWTSGAPDPRCKILIFMGKT----RFDGPRHSQQSMVLVPMDTPGVTVLRPLKVFGYDDAPHGHAEVLFENVRVPVENILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALESMCKRAQQRTAFGKTLAEHGMTRHYIAQSRMEIDQARLLTLKAAWMMDT-VGNKNAKSEIAAIKVVAPNMATRVIDRAIQVHGGGGVCQDFFLAKAYAGARTLRLADGPDEVHQETIAKLELAK 399          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|655389079|ref|WP_028792978.1| (acyl-CoA dehydrogenase [Thalassobaculum salexigens])

HSP 1 Score: 480.715 bits (1236), Expect = 1.031e-165
Identity = 232/405 (57.28%), Postives = 298/405 (73.58%), Query Frame = 0
Query:    1 MYPQLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKK 405
            M P++S  A  L  ++ AF+DE   PAE +YE Q AE +SRW  P I+E LK KA+  GLWN+F+ E D+  +GL+  +YA + EVMGRS +  E  NC+APDTGNMEVL +YG   Q+A WL PL+ G IRS F MTEP VASSDATNI     REGDEYV+N RKWW+SGA+D RC++ + +GK D      A ++RQ S+++VP+ TPGV V RAL+VFG+D APHGHAEV     RVPVSN++LGEG GF+IAQGRLGPGRIHHCMR IG +ER L     RA +R AFGK ++ QGA++  +A+CRI++DQARL+VL+AA +MDT  G K A+QEI+MIKV+AP    +V+D AIQ+HGG GV QD  LA A+ + R+LR+ADGPD+VH+ ++AR ELKK
Sbjct:    1 MIPEMSDKAAELRNRVQAFMDEHVYPAEHIYEEQVAEGASRWSAPPIMEELKAKAKAAGLWNMFLPESDL-GAGLSNRDYAPICEVMGRSSMGSEVFNCSAPDTGNMEVLVRYGTEEQKAAWLTPLLNGEIRSAFAMTEPAVASSDATNIEAQITREGDEYVINARKWWTSGALDERCKIMIFMGKTDP----NAEKYRQQSMILVPLDTPGVTVKRALTVFGYDHAPHGHAEVTFENARVPVSNVLLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALESMKARARSRVAFGKPLSDQGALRHTIAECRINIDQARLMVLYAAHKMDT-VGNKAARQEISMIKVIAPRMACEVIDKAIQVHGGGGVSQDFHLAHAYGHSRALRLADGPDEVHLESIARSELKK 399          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|1000079794|gb|KXJ48199.1| (acyl-CoA dehydrogenase [Alcanivorax sp. Nap_24])

HSP 1 Score: 480.33 bits (1235), Expect = 1.382e-165
Identity = 233/405 (57.53%), Postives = 297/405 (73.33%), Query Frame = 0
Query:    1 MYPQLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKK 405
            M P LS  A+ LY +L AF+D    PAE VY  QH     RW  P II+ LK KA+  GLWNLF+ E + + +GLN  +YA L EVMGRS +AP+  NC APDTGNMEVLA+YG   QQ QWL PL+ G IRS F MTEP VASSDATNI T  +R+GD+YV+NGRKWWSSGAM   C++A+V+GK D      APRH+Q S ++VP+ TPGVK+ RAL VFG+D AP GHAE+   +VRVP SNLILGEG GF+IAQGRLGPGRIHHCMR+IG++ER L     R   R AFG+++++  ++++++A+ R+ ++QARL+ L AA  MDT  G K A+QEIAMIKV+AP     VVD AIQ+HG +GVCQDT LA A+A +R+LR+ADGPD+VH+ ++A+ EL +
Sbjct:    1 MLP-LSDRAQALYDQLVAFMDAHVYPAEAVYAEQHGNSDDRWTPPPIIKELKNKAKAEGLWNLFLPESE-HGAGLNNYDYAHLCEVMGRSAIAPQIFNCAAPDTGNMEVLARYGTPEQQEQWLKPLLNGEIRSCFSMTEPAVASSDATNICTEIKRDGDDYVINGRKWWSSGAMSSECKIAIVMGKSDPD----APRHQQQSQILVPLDTPGVKIERALHVFGYDHAPKGHAEITFTDVRVPASNLILGEGRGFEIAQGRLGPGRIHHCMRSIGVAERALEAMCKRVEEREAFGRKLSQFDSIRKNIARSRLEIEQARLMTLKAAHMMDT-VGNKVARQEIAMIKVIAPEMAANVVDRAIQVHGALGVCQDTFLASAWANLRTLRLADGPDEVHLDSIAKLELGR 398          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|860340458|ref|WP_048387491.1| (acyl-CoA dehydrogenase [Marinobacter psychrophilus] >gi|857136736|gb|AKO53587.1| acyl-CoA dehydrogenase [Marinobacter psychrophilus])

HSP 1 Score: 480.33 bits (1235), Expect = 1.382e-165
Identity = 233/402 (57.96%), Postives = 299/402 (74.38%), Query Frame = 0
Query:    4 QLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKK 405
            +LS  AK L  +L+ F+D    P E  +  Q  +  +RW    IIE LK KA+  GLWNLF+ E D+  +GL   EYA L E+MGRS +APE  NC+APDTGNME +A+YGN +QQ QWL PL+ G IRS F MTEP VASSDATNIA   RREGDEYV+NG+KWWSSGAM   C++A+V+GK D     AAP+H+Q S+++VP+  PGVK++R+L+VFG+D APHGHAE+    VRVPV NL+LGEG GF+IAQGRLGPGRIHHCMR IG++ER L L   RA  R AFGK ++   ++++D+A+ RI ++QARLL L AA+ MDT  G K A+QEIAMIKV+APS   +V+D AIQ+HGG GV QDT LA A+A +R+LR+ADGPD+VH+ +VA+ EL++
Sbjct:    3 ELSDKAKNLQVQLSEFMDVNIYPNESTHHEQIKKAENRWAPVPIIEELKAKAKAEGLWNLFLPESDL-GAGLTNFEYAHLCEIMGRSEMAPEVFNCSAPDTGNMETIARYGNDKQQEQWLKPLLAGEIRSCFSMTEPDVASSDATNIACEIRREGDEYVINGKKWWSSGAMTTTCKIAIVMGKTDP----AAPKHQQQSMILVPLDAPGVKLVRSLTVFGYDHAPHGHAEIHYENVRVPVGNLLLGEGRGFEIAQGRLGPGRIHHCMRIIGVAERALELMCKRANEREAFGKPLSSFDSIRKDIARSRIEIEQARLLTLKAAYMMDT-VGNKVARQEIAMIKVIAPSMALKVLDRAIQVHGGAGVSQDTFLASAWAKVRTLRLADGPDEVHLDSVAKIELRQ 398          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|1086947853|emb|SDF04885.1| (acyl-CoA dehydrogenase [Thalassobaculum litoreum DSM 18839])

HSP 1 Score: 479.945 bits (1234), Expect = 1.964e-165
Identity = 232/405 (57.28%), Postives = 297/405 (73.33%), Query Frame = 0
Query:    1 MYPQLSPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKK 405
            M P++S  A  L  ++ AF+DE   PAE +YE Q AE +SRW  P I+E LK KA+  GLWN+F+ E D+  +GL+  +YA + EVMGRS +  E  NC+APDTGNMEVL +YG   Q+A WL PL+ G IRS F MTEP VASSDATNI     REGDEYV+N RKWW+SGA+D RC++ + +GK D      A ++RQ S+++VP+ TPGV V RAL+VFG+D APHGHAEV     RVPVSN++LGEG GF+IAQGRLGPGRIHHCMR IG +ER L     RA +R AFGK ++ QGA++  +A+CRI++DQARL+VL+AA +MDT  G K A+QEI+MIKV+AP     V+D AIQ+HGG GV QD  LA A+ + R+LR+ADGPD+VH+ ++AR ELKK
Sbjct:    1 MIPEMSDKAAELRNRVQAFMDEHVYPAEHIYEEQVAEGASRWSAPPIMEELKAKAKAAGLWNMFLPESDL-GAGLSNRDYAPICEVMGRSSMGSEVFNCSAPDTGNMEVLVRYGTEEQKAAWLTPLLNGEIRSAFAMTEPAVASSDATNIEAQITREGDEYVINARKWWTSGALDERCKIMIFMGKTDP----NAEKYRQQSMILVPLDTPGVTVKRALTVFGYDHAPHGHAEVTFENARVPVSNVLLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALESMKARARSRVAFGKPLSDQGALRHTIAECRINIDQARLMVLYAAHKMDT-VGNKAARQEISMIKVIAPRMACDVIDKAIQVHGGGGVSQDFHLAHAYGHSRALRLADGPDEVHLESIARSELKK 399          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|653299767|ref|WP_027482658.1| (acyl-CoA dehydrogenase [Deinococcus pimensis])

HSP 1 Score: 479.174 bits (1232), Expect = 8.343e-165
Identity = 243/414 (58.70%), Postives = 298/414 (71.98%), Query Frame = 0
Query:    6 SPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMM--ERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKKAMEGATGPAADA 417
            SP  + L A+L+AF+DE   P E  Y RQ AE   RW    +IE LK  AR+ GLWNLF+    R  + +GL  +EYA L E+MGR   APE  NC+APDTGNMEVLA+YG   QQ +WL PL+ G IRS F MTEP VASSDATNI +S RR+GD+YV++GRKWW+SGA DPRC+VA+ +GK D     +APRHRQ S+++VPM TPG+ V R LSVFG+DDAPHGHAE+    VRVP +NL+LGEG GF+IAQGRLGPGRIHHCMR IGL+ER L L   RA +R AFG+ I+ QG V+  +A+ R+ ++QARLLVL AA  MDT  G K A+ EIAMIKVVAP+   +V+D AIQ+HGG GV QDT LA A+A  R+LR+ADGPD+VH  TVA+ EL+       G   DA
Sbjct:    6 SPKVQDLRARLSAFMDEHVYPNEETYARQVAE-GDRWTPVAVIEELKPLAREAGLWNLFLPPGSRHSFGAGLTNLEYAPLCEIMGRVPWAPEVFNCSAPDTGNMEVLAQYGTPEQQERWLAPLLAGEIRSCFAMTEPEVASSDATNIESSIRRDGDDYVIDGRKWWTSGAGDPRCRVAIFMGKTDP----SAPRHRQQSMILVPMDTPGITVRRMLSVFGYDDAPHGHAEIAFEGVRVPAANLLLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELTCARAASRVAFGRPISEQGVVRAGIAESRMEIEQARLLVLKAAHMMDT-VGNKAARAEIAMIKVVAPNVACRVIDRAIQVHGGAGVSQDTFLAYAYASSRTLRLADGPDEVHAETVAKEELRPFQPRREGEKPDA 413          
BLAST of EWM29806.1 vs. NCBI_GenBank
Match: gi|516852871|ref|WP_018131320.1| (acyl-CoA dehydrogenase [Effusibacillus pohliae])

HSP 1 Score: 478.404 bits (1230), Expect = 8.511e-165
Identity = 236/404 (58.42%), Postives = 289/404 (71.53%), Query Frame = 0
Query:    6 SPHAKTLYAKLTAFVDEECLPAEVVYERQHAELSSRWMIPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKVVAPSAGQQVVDTAIQIHGGMGVCQDTILARAFAYMRSLRIADGPDDVHMRTVARYELKKAMEG 409
            S   K L  +L  F+DE   P E  YE+Q  E  +RW IP I+E +K KAR  GLWNLF+ E + + +GL  +EYA L E+MGRSF+APE  NC+APDTGNMEVL +YG   QQ +WL PL+ G IRS F MTEP VASSDATNI  S  R+GDEYV+NGRKWWSSGA DPRC++A+V+GK +      APRH Q S+++VP+ TPGVK+ R L VFG+DDAPHGHAE+    VRVP SN+I  EG GF IAQGRLGPGRIHHCMR IGL+ER L L   RA  R AFGK +A QG +Q  +A  RI ++QARLL L AA+ MDT  G K A++EIAMIKVVAP+   +V+D AIQ+HG  GV +D  LAR +A +R+LR+ADGPD+VH   +A+ ELK    G
Sbjct:    6 SDRVKALQERLIQFMDEVVYPNEKTYEQQLNEAPTRWQIPPIMEEMKAKARAAGLWNLFLPESE-WGAGLTNLEYAPLCEIMGRSFIAPEVFNCSAPDTGNMEVLVRYGTKEQQEKWLVPLLNGEIRSCFSMTEPEVASSDATNIEASIVRDGDEYVINGRKWWSSGAGDPRCKIAIVMGKTNP----NAPRHEQQSMILVPLDTPGVKIERILPVFGYDDAPHGHAEITFDNVRVPASNIIWEEGKGFAIAQGRLGPGRIHHCMRLIGLAERALELMVARAKNRVAFGKPLAEQGVIQEWIADSRIEIEQARLLTLKAAYMMDT-VGNKVARKEIAMIKVVAPNMALKVIDRAIQVHGAAGVSEDFPLARMWATIRTLRLADGPDEVHRAAIAKLELKAHQSG 403          
The following BLAST results are available for this feature:
BLAST of EWM29806.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112387|gb|EWM29806.1|0.000e+0100.00acyl- dehydrogenase [Nannochloropsis gaditana][more]
gi|1094574022|emb|SEO70531.1|1.125e-16758.71Acyl-CoA dehydrogenase [Aquisalimonas asiatica][more]
gi|1011962882|ref|WP_062769291.1|3.553e-16658.60acyl-CoA dehydrogenase [Tistrella mobilis] >gi|101... [more]
gi|504557063|ref|WP_014744165.1|4.232e-16658.60acyl-CoA dehydrogenase [Tistrella mobilis] >gi|388... [more]
gi|655389079|ref|WP_028792978.1|1.031e-16557.28acyl-CoA dehydrogenase [Thalassobaculum salexigens... [more]
gi|1000079794|gb|KXJ48199.1|1.382e-16557.53acyl-CoA dehydrogenase [Alcanivorax sp. Nap_24][more]
gi|860340458|ref|WP_048387491.1|1.382e-16557.96acyl-CoA dehydrogenase [Marinobacter psychrophilus... [more]
gi|1086947853|emb|SDF04885.1|1.964e-16557.28acyl-CoA dehydrogenase [Thalassobaculum litoreum D... [more]
gi|653299767|ref|WP_027482658.1|8.343e-16558.70acyl-CoA dehydrogenase [Deinococcus pimensis][more]
gi|516852871|ref|WP_018131320.1|8.511e-16558.42acyl-CoA dehydrogenase [Effusibacillus pohliae][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna835rna835Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications