EWM22330.1, cds8342 (CDS) Nannochloropsis gaditana

Overview
NameEWM22330.1
Unique Namecds8342
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:503150..504019 +
Alignment locationKK037248.1:504091..504211 +
Alignment locationKK037248.1:504331..505316 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22330.1
Producteukaryotic initiation factor 3 p66 subunit
Orig transcript idgnl|cribi|Naga_100118g3.2757.mrna
GeneEIF3d
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:503150..504019 +
KK037248.1supercontigKK037248.1:504091..504211 +
KK037248.1supercontigKK037248.1:504331..505316 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: INTERPRO
TermDefinition
IPR007783eIF3d
Homology
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|585102827|gb|EWM22330.1| (eukaryotic initiation factor 3 p66 subunit [Nannochloropsis gaditana])

HSP 1 Score: 1365.13 bits (3532), Expect = 0.000e+0
Identity = 658/658 (100.00%), Postives = 658/658 (100.00%), Query Frame = 0
Query:    1 MAHDGDGENGGVEELPFNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPFKPGGFGGRGRGGARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGPYRLVARTELQGYLLRGGKEGYLTSYALNEWETQRWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFLSPESSLESGKYVLLKDPNKPTLRIYAVPLDAFEGDEEDEDEDEDEDEEYDDDGAPDKTSGRDGEEEEEEEDTGAKHRQFSGPPQTGPVI 658
            MAHDGDGENGGVEELPFNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPFKPGGFGGRGRGGARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGPYRLVARTELQGYLLRGGKEGYLTSYALNEWETQRWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFLSPESSLESGKYVLLKDPNKPTLRIYAVPLDAFEGDEEDEDEDEDEDEEYDDDGAPDKTSGRDGEEEEEEEDTGAKHRQFSGPPQTGPVI
Sbjct:    1 MAHDGDGENGGVEELPFNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPFKPGGFGGRGRGGARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGPYRLVARTELQGYLLRGGKEGYLTSYALNEWETQRWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFLSPESSLESGKYVLLKDPNKPTLRIYAVPLDAFEGDEEDEDEDEDEDEEYDDDGAPDKTSGRDGEEEEEEEDTGAKHRQFSGPPQTGPVI 658          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|299472596|emb|CBN78248.1| (Eukaryotic initiation factor 3 d subunit [Ectocarpus siliculosus])

HSP 1 Score: 400.593 bits (1028), Expect = 1.471e-128
Identity = 257/626 (41.05%), Postives = 344/626 (54.95%), Query Frame = 0
Query:   17 FNTPSVFLN-EHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPF--------------------------KPGGFGGRGRGGARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLP--DSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQ-PNPFFNAQEEQEGSEPATVAYRYRRFQLGP-YRLVARTELQGYL----LRGGKEGYLTSYALNEWETQ-----RWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFLSPESSLESGKYVLLKDPNKPTLRIYAVPLDAFE 602
            F TP V  N E GWGP     P QF  +PY PF K+DR+G+AA+ T  +Y+ ++R  R  R ED     N   +Y+YD  ED++FR+VD+ K K   ++RFGP                            +P    G   G  R G R    + V     +R+R+  G GP                  +  +R+ASV V  DW  +E+ +LPQL KL   N+P+ ED++W G L+QY++ YD++T+R ER L+  +K   YYV T DDP +E+ A E   G VFATDA+LAHLM   R                    T YP              D   Q  NG LFL  RE    L  +TVNETA + PP P  D  +++N P  L LEAT INQNFS QILK           P  RK  + PNPFF+  E   G  PA + YRYR+FQLG  Y +VAR E+ G      ++ G++ Y++++ALNEW+++      WRQKID Q+G+ILATELKNNS KLAKW AQS+L+GAD MK+G VSRV++A+  +H+VLGT  YKP+EFA + + L   NMWGII  + +  +      E GKYV++KDPNK  +R+Y+VP + FE
Sbjct:    9 FTTPVVHTNAEGGWGPDASALPEQFLDVPYAPFGKSDRIGRAADFTAPVYF-QNRSFRNRRGED--NAVNAEFQYKYDNEEDEAFRLVDTTKSK---QNRFGPRNRWNNNRGRGRGRGGRFGGRFGETTRGQPAASQGGQAGKDRTGGR---FIGVPKNKWERQRLARGRGPY-------------RRDRQRTDRQASVQVLPDWQVVEEFELPQLTKLQT-NIPKAEDIQWCGFLEQYDDQYDRITSRTERRLQRCEKKEFYYVTTTDDPVMEKLAVEG-KGNVFATDAILAHLMASPR--------------------TIYPW-------------DIVVQKVNGTLFLDKREAS-QLDYLTVNETAVD-PPTPGDDPTNNINAPDRLSLEATMINQNFSQQILK-----------PGNRKNLEMPNPFFDKDEAAPGMTPAAIGYRYRKFQLGANYTVVARCEVHGTAVKPGMKAGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIGLVSRVTKANAYEHVVLGTQSYKPREFATQ-ITLSANNMWGIIHMIVELLMKH----EDGKYVVMKDPNKQVVRVYSVPANTFE 559          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|676394537|ref|XP_009040546.1| (hypothetical protein AURANDRAFT_31918 [Aureococcus anophagefferens] >gi|323448917|gb|EGB04810.1| hypothetical protein AURANDRAFT_31918 [Aureococcus anophagefferens])

HSP 1 Score: 388.267 bits (996), Expect = 5.060e-124
Identity = 257/600 (42.83%), Postives = 347/600 (57.83%), Query Frame = 0
Query:   13 EELPFNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYS---RHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPFK-PGGFGGRGRGG--ARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGPYRLVARTELQGYLLRGGKEGYLTSYALNEWETQ-----RWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFLSPESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            + +PF+ P V  N+  WGPT +N P QF  +PY PF K DRLG+AA+ T S YYS   ++R  R +R  D ++  NE  +Y+YD  ED SF +VD+ K K    SRF   FK P    GRGRG     G  +  +    + G G R   Q   G  G+GGR   RG G   R +  +R +SV V  DW  +E+ DL QL KL    VPE  DL W G L  YN+AYD+++ R ++PL+  +    YYV T DDP +E+ A EE AG V+ TDA+ + LM   RS + +   + +L                                 +G L ++ + D  A   +TV+ET+ E PP     D +N P  L +EAT INQNFS QILK       + P P   K   PNPF +A+ E   S+PA++AYRYR+F LG + +VARTEL G + + G++  +T+Y LNEW+++      WRQKID Q+G++LATELKNNS KLA+W AQS+LAGA+ MK+G+VSRV++ +  DH+VL T  YKP+EFA + + L V NMWGIIK L D  L    S + GKYV+ +D  KP +RIYAVP + F
Sbjct:    4 KSVPFSPPVVHHNKDSWGPTSENLPQQFVDVPYAPFGKGDRLGRAADFTMSSYYSAKQKYRRDRENRAGDDFK--NEEFQYKYDAVEDSSFHLVDTAKAK---TSRFNQGFKKPWQTRGRGRGAWGKGGRGQGQQDQFGKGGKGGRGNQQAKGGKNGKGGRGRGRGWGRRDRVQRVDRGSSVKVAADWKCVEEFDLAQLTKLST-KVPEATDLLWAGELGTYNDAYDRLSTRADKPLQRCENREFYYVTTTDDPAIEKLA-EEQAGTVYGTDAIFSLLMASPRSVYPWDVIVQKL---------------------------------DGTL-VFDKRDTAAFDFLTVSETSHEPPP----ADEINTPEKLSIEATMINQNFSQQILK-------TDPAP--EKMALPNPFADAESE---SKPASMAYRYRKFALGEHTIVARTELHGLVEKRGEKHKMTAYCLNEWDSKLSGGVEWRQKIDSQRGAVLATELKNNSCKLARWTAQSILAGAEQMKLGYVSRVARTNPYDHVVLATQFYKPREFATQ-ITLNVNNMWGIIKMLVDLLL----SYDDGKYVIARDGAKPIVRIYAVPNNTF 541          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|675209779|ref|XP_008913774.1| (hypothetical protein PPTG_17319 [Phytophthora parasitica INRA-310] >gi|568086112|gb|ETN01008.1| hypothetical protein PPTG_17319 [Phytophthora parasitica INRA-310])

HSP 1 Score: 354.369 bits (908), Expect = 5.385e-111
Identity = 238/602 (39.53%), Postives = 327/602 (54.32%), Query Frame = 0
Query:   17 FNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKR-KVKSRFGPPFKPGGFGGRGRGG------ARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIE---NRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGP-YRLVARTELQGYLLRGGKEGYLTSYALNEWETQ-----RWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFL-SPESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            + TP V +N +GWGPT    P QF  +PY PFNK D+LGKAA+   +         R SR+       N   +Y++D  ED +F++VD+ KG R K + R  P +    FGGRG  G      + G   D       S    + R++G      R  RL    R   FR R E   +R ASV V+  W  ++  ++ QL KL  AN+P+ EDLKW G L +++ ++D++T+R    +  +D    YYV T DDP +E  A ++    VFATDA+LAHLM C RS F +                                 D   Q  N ++F + + DE     +TVNE A++ PP  +  +H+NHP  L LEAT INQN S Q+LK       +      +K  +PNPF       E ++PA+ AYRYR+F LG    LVAR E+QG  L+ GK+ Y++++ALNE++ +      WR+KID Q+G+ILA ELKNNS KLAKW AQ+LL+G D MK+G+VSR S      H+VLG   Y P  FA + + L   N WGIIK L +  L  PE     GKYV++KDPNKP +R+++VPLD F
Sbjct:    4 YETPRVDVNANGWGPTVL--PEQFLNVPYAPFNKGDKLGKAADFVSNYA------PRGSRYARDPSGVNAEFQYKHDSKEDATFQLVDTSKGTRPKTEDRLRPTWNQQRFGGRGGRGGRGGRGSYGDKPDPNGPTTSSA---QLRMKGMQKQNKRWDRLSNARRALTFRRRDEVHVDRVASVMVQASWNLVDQFEMQQLTKLQ-ANIPKSEDLKWCGELREFDASFDRITSRSNTRVHRYDDRDFYYVTTTDDPIIEDLA-QQGEATVFATDAILAHLMACTRSVFPW---------------------------------DIVAQRVNNMVF-FDKRDESNFDLLTVNENASD-PPNHEDPEHMNHPDRLSLEATMINQNLSQQVLK-------TANGAFYKKFDEPNPF-----ASEDAKPASGAYRYRKFDLGGGLNLVARCEVQGVALKKGKQQYVSTFALNEYDPKFPGSIEWRKKIDSQRGAILANELKNNSCKLAKWTAQALLSGVDEMKLGYVSRSSFKDPYSHVVLGMQSYIPSTFATQ-IALNQNNTWGIIKMLSELLLEQPE-----GKYVIMKDPNKPIMRLFSVPLDTF 539          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|568036189|gb|ETM33805.1| (hypothetical protein L914_19011 [Phytophthora parasitica])

HSP 1 Score: 353.984 bits (907), Expect = 7.915e-111
Identity = 237/602 (39.37%), Postives = 327/602 (54.32%), Query Frame = 0
Query:   17 FNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKR-KVKSRFGPPFKPGGFGGRGRGG------ARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIE---NRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGP-YRLVARTELQGYLLRGGKEGYLTSYALNEWETQ-----RWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFL-SPESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            + TP V +N +GWGPT    P QF  +PY PFNK D+LGKAA+   +         R SR+       N   +Y++D  ED +F++VD+ KG R K + R  P +    FGGRG  G      + G   D       S    + R++G      R  RL    R   FR R E   +R ASV V+  W  ++  ++ QL KL  AN+P+ EDLKW G L +++ ++D++T+R    +  +D    YYV T DDP +E  A ++    VFATDA+LAHLM C RS F +                                 D   Q  N ++F + + DE     +TVNE A++ PP  +  +H+NHP  L LEAT INQN S Q+LK       +      +K  +PNPF       E ++PA+ AYRYR+F LG    LVAR E+QG  L+ GK+ Y++++ALNE++ +      WR+KID Q+G+ILA ELKNNS KLAKW AQ+LL+G D MK+G+VSR +      H+VLG   Y P  FA + + L   N WGIIK L +  L  PE     GKYV++KDPNKP +R+++VPLD F
Sbjct:    4 YETPRVDVNANGWGPTVL--PEQFLNVPYAPFNKGDKLGKAADFVSNYA------PRGSRYARDPSGVNAEFQYKHDSKEDATFQLVDTSKGTRPKTEDRLRPTWNQQRFGGRGGRGGRGGRGSYGDKPDPNGPTTSSA---QLRMKGMQKQNKRWDRLSNARRALTFRRRDEVHVDRVASVMVQASWNLVDQFEMQQLTKLQ-ANIPKSEDLKWCGELREFDASFDRITSRSNTRVHRYDDRDFYYVTTTDDPIIEDLA-QQGEATVFATDAILAHLMACTRSVFPW---------------------------------DIVAQRVNNMVF-FDKRDESNFDLLTVNENASD-PPSQEDPEHMNHPDRLSLEATMINQNLSQQVLK-------TANGAFYKKFDEPNPF-----ASEDAKPASGAYRYRKFDLGGGLNLVARCEVQGVALKKGKQQYVSTFALNEYDPKFPGSIEWRKKIDSQRGAILANELKNNSCKLAKWTAQALLSGVDEMKLGYVSRSNFKDPYSHVVLGMQSYIPSTFATQ-IALNQNNTWGIIKMLSELLLEQPE-----GKYVIMKDPNKPIMRLFSVPLDTF 539          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|566010665|gb|ETI33576.1| (hypothetical protein F443_19775 [Phytophthora parasitica P1569] >gi|567948148|gb|ETK73905.1| hypothetical protein L915_19207 [Phytophthora parasitica] >gi|567976822|gb|ETL27337.1| hypothetical protein L916_19101 [Phytophthora parasitica] >gi|568006346|gb|ETL80612.1| hypothetical protein L917_18922 [Phytophthora parasitica] >gi|570314393|gb|ETO62341.1| hypothetical protein F444_19736 [Phytophthora parasitica P1976] >gi|570938175|gb|ETP03432.1| hypothetical protein F441_19609 [Phytophthora parasitica CJ01A1] >gi|570938188|gb|ETP03445.1| hypothetical protein F441_19621 [Phytophthora parasitica CJ01A1] >gi|570968497|gb|ETP31616.1| hypothetical protein F442_19555 [Phytophthora parasitica P10297] >gi|970616325|gb|KUF64509.1| Eukaryotic translation initiation factor 3 subunit D [Phytophthora nicotianae] >gi|970657605|gb|KUF95465.1| hypothetical protein AM588_10009076 [Phytophthora nicotianae])

HSP 1 Score: 353.214 bits (905), Expect = 1.410e-110
Identity = 237/602 (39.37%), Postives = 327/602 (54.32%), Query Frame = 0
Query:   17 FNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKR-KVKSRFGPPFKPGGFGGRGRGG------ARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIE---NRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGP-YRLVARTELQGYLLRGGKEGYLTSYALNEWETQ-----RWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFL-SPESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            + TP V +N +GWGPT    P QF  +PY PFNK D+LGKAA+   +         R SR+       N   +Y++D  ED +F++VD+ KG R K + R  P +    FGGRG  G      + G   D       S    + R++G      R  RL    R   FR R E   +R ASV V+  W  ++  ++ QL KL  AN+P+ EDLKW G L +++ ++D++T+R    +  +D    YYV T DDP +E  A ++    VFATDA+LAHLM C RS F +                                 D   Q  N ++F + + DE     +TVNE A++ PP  +  +H+NHP  L LEAT INQN S Q+LK       +      +K  +PNPF       E ++PA+ AYRYR+F LG    LVAR E+QG  L+ GK+ Y++++ALNE++ +      WR+KID Q+G+ILA ELKNNS KLAKW AQ+LL+G D MK+G+VSR +      H+VLG   Y P  FA ++  L   N WGIIK L +  L  PE     GKYV++KDPNKP +R+++VPLD F
Sbjct:    4 YETPRVDVNANGWGPTVL--PEQFLNVPYAPFNKGDKLGKAADFVSNYA------PRGSRYARDPSGVNAEFQYKHDSKEDATFQLVDTSKGTRPKTEDRLRPTWNQQRFGGRGGRGGRGGRGSYGDKPDPNGPTTSSA---QLRMKGMQKQNKRWDRLSNARRALTFRRRDEVHVDRVASVMVQASWNLVDQFEMQQLTKLQ-ANIPKSEDLKWCGELREFDASFDRITSRSNTRVHRYDDRDFYYVTTTDDPIIEDLA-QQGEATVFATDAILAHLMACTRSVFPW---------------------------------DIVAQRVNNMVF-FDKRDESNFDLLTVNENASD-PPNQEDPEHMNHPDRLSLEATMINQNLSQQVLK-------TANGAFYKKFDEPNPF-----ASEDAKPASGAYRYRKFDLGGGLNLVARCEVQGVALKKGKQQYVSTFALNEYDPKFPGSIEWRKKIDSQRGAILANELKNNSCKLAKWTAQALLSGVDEMKLGYVSRSNFKDPYSHVVLGMQSYIPSTFATQIA-LNQNNTWGIIKMLSELLLEQPE-----GKYVIMKDPNKPIMRLFSVPLDTF 539          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|953499739|emb|CEG39165.1| (eukaryotic translation initiation factor [Plasmopara halstedii])

HSP 1 Score: 352.058 bits (902), Expect = 3.714e-110
Identity = 231/599 (38.56%), Postives = 323/599 (53.92%), Query Frame = 0
Query:   17 FNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKR-KVKSRFGPPFKPGGFGGRGRGGARGGARDVKALAVQSG---AGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGRIE---NRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLGP-YRLVARTELQGYLLRGGKEGYLTSYALNEWETQ-----RWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFL-SPESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            +  PSV +N HGWGPT    P QF  +PY PF+K D+LGKAA+   +         R SR+       N   +Y++D  ED +F++VD+ KG R + + R  P +    FGGRG  G RGG          +G   +  + R++G      R  RL    R    R R E   +R ASV +++ W  ++  +L QL KL  AN+P+ EDLKW G L +++ A+D++T+R    +  +D    YYV T DDP +E +A +E    VFATDA+L+HLM C RS F +                                 D   Q  N ++F + + D      +T NE A+E PP+ +  DH+NHP  L LEAT INQN S Q+LK              +K    NPF       + ++PA+ AYRYR F LG    L+AR E+Q   ++ G + Y++++ALNE+  +      WR+KID Q+G+ILA ELKNN+FKLAKW AQ+LL G D MK+G+VSR++      H++LG   Y P  FA ++  L   N WGIIK L +  L  PE     GKYV++KDPNKP LR+++VPLD F
Sbjct:    4 YEIPSVDVNTHGWGPT--TLPEQFLNIPYAPFSKGDKLGKAADFVSNYA------PRGSRYARDPSGVNAEFQYKHDSKEDATFQLVDTSKGTRPRTEDRLRPTWNQQRFGGRGGRGGRGGRGTYTDKPDPNGPTTSSAQLRMKGMQKQNKRWDRLSNARRAFTLRRREEVQIDRVASVLIQSSWTLVDQFELQQLTKLQ-ANIPKSEDLKWCGELCEFDTAFDRITSRTNTRVHRYDDRDFYYVTTTDDPVIEGFA-QEGKATVFATDAILSHLMVCTRSVFPW---------------------------------DIVAQRVNNMVF-FDKRDASTFDLLTANENASE-PPIEEDPDHINHPDRLSLEATMINQNLSQQVLKND----------NCQKFDDSNPF-----ASDDAKPASGAYRYRNFDLGTGLNLIARCEVQSVAMKKGTKNYVSTFALNEYNPKFPGAIDWRKKIDSQRGAILANELKNNAFKLAKWTAQALLGGVDEMKLGYVSRLNFKDPYAHVILGVQSYNPNTFATQIA-LNQNNTWGIIKMLSELLLEQPE-----GKYVIMKDPNKPILRLFSVPLDTF 536          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|673032126|ref|XP_008870024.1| (hypothetical protein H310_06660 [Aphanomyces invadans] >gi|574474024|gb|ETW01026.1| hypothetical protein H310_06660 [Aphanomyces invadans])

HSP 1 Score: 347.051 bits (889), Expect = 4.355e-108
Identity = 231/599 (38.56%), Postives = 315/599 (52.59%), Query Frame = 0
Query:   17 FNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELT-QSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPFKPGGFGGR---GRGGARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFR---GRIENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLG-PYRLVARTELQGYLLRGGKEGYLTSYALNEWETQR-----WRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFL-SPESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            F+TP V  N  GWGPT    P QF  +PY PF K D+LGKAA+ T Q    + +R  R  R  D   V N   +Y++D  ED SF++VD+ K  R   +R  P +    F       R G   G + + AL  QS    +    G      R  RL    R    +   G  + R ASV +  +W  ++  +L QL KL  AN+P  EDLK +G L +Y++ +D++++R  +PL  F+      V T +DP +E  A E  AG VFATDA+LAHLM+C RS + +                                 D   Q  N LLF   R+    +  ++VNETA E PP PD  D VNHP  L +EAT IN  F+ Q+L+         P     KTY PNPF            A VAY+YRR+ L     LVAR E+    L+G  E  + ++ALNEW+ +      WR+KID Q+G++LA ELKNN+ KLA+W   +LLA A LMK+G+V+R +   N  H++L T  Y P +FA++  +L +TN WGIIK L + F+  PE     GKYV++KDPNKP +RIY+VPL+ F
Sbjct:    4 FSTPVVTCNTKGWGPT--ELPKQFLNIPYAPFGKLDKLGKAADFTAQYQTANANRPGRYQRVTDPSGV-NAEFQYKHDAIEDSSFQLVDTAKATRN-NTRLRPTWGQQRFAANRLNNRNGKTPG-QGMTALESQSQMMKK----GQQKQNKRWDRLSNARRMFTTKRRDGETKERMASVQISTEWKLVQQFELQQLLKLQ-ANIPASEDLKTFGTLLKYDDNFDRMSSRTAKPLTRFEIKENVAVTTTEDPVIESLATEG-AGTVFATDAILAHLMSCPRSVYPW---------------------------------DIVVQRVNNLLFFDKRDISSGIDLLSVNETALE-PPNPDEPDSVNHPDRLAVEATDINTFFAQQVLR---------PATEFTKTYNPNPF--------PDNTAPVAYKYRRWALNDSVNLVARCEVNALSLKGEVEQTVKTFALNEWDPKLSGGIDWRKKIDSQRGALLANELKNNAPKLAQWTHSALLANAGLMKLGYVTRHNTKDNQAHVILATQSYNPVDFAQQT-SLSLTNAWGIIKMLVELFMEQPE-----GKYVMMKDPNKPVVRIYSVPLNTF 534          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|698779399|ref|XP_009822743.1| (hypothetical protein H257_01301 [Aphanomyces astaci] >gi|574122404|gb|ETV87880.1| hypothetical protein H257_01301 [Aphanomyces astaci])

HSP 1 Score: 346.665 bits (888), Expect = 8.936e-108
Identity = 229/596 (38.42%), Postives = 314/596 (52.68%), Query Frame = 0
Query:   17 FNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELT-QSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPFKPGGFGGRGRGGARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFR---GRIENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLG-PYRLVARTELQGYLLRGGKEGYLTSYALNEWETQR-----WRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFL-SPESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            F TP+V  N  GWGPT  + P QF  +PY PF K D+LGKAA+ T Q    + +R  R  R  D   V N   +Y++D  ED+SF++VD+ K  R   +R  P +    F    R   R G    +   V        + +G      R  RL    R  + +   G  + R ASV V  +W  ++  +L QL KL  AN+P  EDLK  G L +Y++ +D+++AR  +PL  F+      V T +DP +E  A E  AG VFATDA+LAHLM+C RS + +                                 D   Q  N LLF   R+    +  ++VNETA E PP PD  D VNHP  L +EAT IN  F+HQ+L+         P     K Y PNPF            A VAY+YRR+ L     LVAR E+    L+G  E  + ++ALNEW+ +      WR+KID Q+G++LA ELKNN+ K+A+W   +LLA A LMK+G+V+R +   +  H++L T  Y P +FA++  +L +TN WGIIK L + F+  PE     GKYV++KDPNKP +RIY+VPLD F
Sbjct:   15 FTTPAVSQNSKGWGPT--DLPKQFLNIPYAPFGKLDKLGKAADFTAQYQSANPNRPARYQRTNDPSGV-NAEFQYKHDTIEDQSFQLVDTAKATRN-NTRLRPTWGQQRFAA-NRLNNRNGKTPGQGPPVLESQSQMMK-KGQQKQNKRWDRLSNARRMFSTKRRDGETKERMASVQVSTEWKLVQQFELMQLMKLQ-ANIPPSEDLKTLGTLHKYDDNFDRISARTAKPLARFEVKENVAVTTTEDPVIESLATEG-AGTVFATDAILAHLMSCPRSVYPW---------------------------------DIVVQRVNNLLFFDKRDISSGVDLLSVNETALE-PPNPDEPDSVNHPDRLAVEATDINTFFAHQVLR---------PAAEFSKAYGPNPF--------PDNTAPVAYKYRRWALNESVNLVARCEVNALSLKGDVEQTVKTFALNEWDPKLSGSIDWRKKIDSQRGALLANELKNNAPKIAQWTHSALLANAGLMKLGYVTRHNTKDSQSHVILATQSYNPVDFAQQT-SLNLTNAWGIIKMLVELFMEQPE-----GKYVMMKDPNKPVVRIYSVPLDTF 545          
BLAST of EWM22330.1 vs. NCBI_GenBank
Match: gi|813117975|ref|XP_012195810.1| (hypothetical protein SPRG_01854 [Saprolegnia parasitica CBS 223.65] >gi|641539230|gb|KDO33039.1| hypothetical protein SPRG_01854 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 341.273 bits (874), Expect = 7.246e-106
Identity = 227/595 (38.15%), Postives = 307/595 (51.60%), Query Frame = 0
Query:   17 FNTPSVFLNEHGWGPTPDNDPAQFRFLPYCPFNKTDRLGKAAELTQSLYYSRHRDQRRSRFEDAYRVSNESLKYEYDQAEDKSFRMVDSEKGKRKVKSRFGPPFKPGGFGGRGRGGARGGARDVKALAVQSGAGDRRRVQGGMGPGGRGGRLGWRGRGGAFRGR---IENRKASVNVENDWVALEDVDLPQLGKLHVANVPEVEDLKWYGALDQYNEAYDKVTARHERPLKAFDKILPYYVNTMDDPNLERYAAEEFAGQVFATDAVLAHLMTCGRSHFSYREQICELAWLRPRVLTYYPTLNASTLPVYANMRDHAQQFPNGLLFLYAREDEFALKTMTVNETATEMPPLPDSEDHVNHPRHLELEATAINQNFSHQILKRPVPTNASTPVPTTRKTYQPNPFFNAQEEQEGSEPATVAYRYRRFQLG-PYRLVARTELQGYLLRGGKEGYLTSYALNEWE-----TQRWRQKIDVQKGSILATELKNNSFKLAKWAAQSLLAGADLMKVGFVSRVSQASNVDHLVLGTTQYKPQEFAERMLNLKVTNMWGIIKWLCDKFLS-PESSLESGKYVLLKDPNKPTLRIYAVPLDAF 601
            +  PSV +N  GWGPT  + P QF  +PY PF K+D+LGKAA+       +  R  R  R  D   V N   +Y++D  ED SF++VD+ K  R   +R  P +    F           A+D   +A+++    ++   G      R  RL    R    + R    + R ASV V+  W  +E  +L QL KL  AN+P  EDLK  G L +Y++ YD++T R  + L   +      V T DDP +E  A E  A  VFATDA+L+HLM   RS + +                                 D   Q    +LF   RE    L  +TVNETA + P   D  D +NHP  L LEAT INQ F+ Q+LK               KT++ NPF        G   A +AY+YRRFQL     +VAR EL     +GG E  + ++ALNEW+     +  WR+KID+Q+G++LATELKNNS K+AKW   ++LAGAD MK+GFVSR +     +H +L T  YKP +FA +  +L   N WGI+K L D FL+ PE     GKYV++KDPNKP +RIY+VPL+ F
Sbjct:    4 YTAPSVSVNGVGWGPT--SLPKQFANIPYAPFGKSDKLGKAADFISQNNQAIGRPGRFQRSNDPSGV-NAEFQYKHDAVEDLSFQLVDTAKAVRN-NTRLRPTWGQQRFQANRNNNRNNLAKDKGLVALETTTQMKK---GQQKQNKRWDRLNTARRMFGNKRRDNDTKERVASVQVDTTWKMIEQFELAQLVKLQ-ANIPASEDLKTCGQLRKYDDTYDRITTRFAKTLGRHEDKEFVSVTTTDDPIIEALATEG-AATVFATDAILSHLMASPRSVYPW---------------------------------DIVVQRVGNMLFFDKREAS-TLDMVTVNETAIDTPN-ADDPDSINHPDRLSLEATLINQAFTQQVLKAN---------DDFVKTFEANPF-------SGENLAPIAYKYRRFQLSETVAMVARCELHAISTKGGAEQTVAAFALNEWDPKLSGSVEWRKKIDLQRGALLATELKNNSCKIAKWTHSAILAGADQMKLGFVSRANAKDPFNHTILATQSYKPVDFASQT-SLNQNNAWGIVKMLVDIFLNQPE-----GKYVMMKDPNKPVVRIYSVPLNTF 532          
The following BLAST results are available for this feature:
BLAST of EWM22330.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102827|gb|EWM22330.1|0.000e+0100.00eukaryotic initiation factor 3 p66 subunit [Nannoc... [more]
gi|299472596|emb|CBN78248.1|1.471e-12841.05Eukaryotic initiation factor 3 d subunit [Ectocarp... [more]
gi|676394537|ref|XP_009040546.1|5.060e-12442.83hypothetical protein AURANDRAFT_31918 [Aureococcus... [more]
gi|675209779|ref|XP_008913774.1|5.385e-11139.53hypothetical protein PPTG_17319 [Phytophthora para... [more]
gi|568036189|gb|ETM33805.1|7.915e-11139.37hypothetical protein L914_19011 [Phytophthora para... [more]
gi|566010665|gb|ETI33576.1|1.410e-11039.37hypothetical protein F443_19775 [Phytophthora para... [more]
gi|953499739|emb|CEG39165.1|3.714e-11038.56eukaryotic translation initiation factor [Plasmopa... [more]
gi|673032126|ref|XP_008870024.1|4.355e-10838.56hypothetical protein H310_06660 [Aphanomyces invad... [more]
gi|698779399|ref|XP_009822743.1|8.936e-10838.42hypothetical protein H257_01301 [Aphanomyces astac... [more]
gi|813117975|ref|XP_012195810.1|7.246e-10638.15hypothetical protein SPRG_01854 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8369rna8369Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications