EWM22339.1, cds8338 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|585102837|gb|EWM22339.1| (hypothetical protein Naga_100277g6 [Nannochloropsis gaditana]) HSP 1 Score: 966.452 bits (2497), Expect = 0.000e+0 Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0
Query: 1 MYHGHDPPLQHDFYHYGGGEEGDNDGIILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGVLAAHAERIGSVRAGTDSEGGSPSYLGSPVKREGGEEDGGDVDRKMHEIGVSRDGEGEGRKGREGGTAGKPASLLSSWVQKLRVGPSRVLPPSSSPPSRLATPATSGMSRAASSAPPSFGPSSPAPGPSLAGLLPADIPHNRGGKEGGSDNDRGAGGRLAASEPPRPFPSHQQPSWAPGRPLAKPSSPPSLSTSPFSTFVGPTSPPLTLRVMPQSLVLARLNQEALPERSDLLARLLLFDRLAIRRFGAGGGGGGGEGGIEGKGGKHQR 487
MYHGHDPPLQHDFYHYGGGEEGDNDGIILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGVLAAHAERIGSVRAGTDSEGGSPSYLGSPVKREGGEEDGGDVDRKMHEIGVSRDGEGEGRKGREGGTAGKPASLLSSWVQKLRVGPSRVLPPSSSPPSRLATPATSGMSRAASSAPPSFGPSSPAPGPSLAGLLPADIPHNRGGKEGGSDNDRGAGGRLAASEPPRPFPSHQQPSWAPGRPLAKPSSPPSLSTSPFSTFVGPTSPPLTLRVMPQSLVLARLNQEALPERSDLLARLLLFDRLAIRRFGAGGGGGGGEGGIEGKGGKHQR
Sbjct: 1 MYHGHDPPLQHDFYHYGGGEEGDNDGIILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGVLAAHAERIGSVRAGTDSEGGSPSYLGSPVKREGGEEDGGDVDRKMHEIGVSRDGEGEGRKGREGGTAGKPASLLSSWVQKLRVGPSRVLPPSSSPPSRLATPATSGMSRAASSAPPSFGPSSPAPGPSLAGLLPADIPHNRGGKEGGSDNDRGAGGRLAASEPPRPFPSHQQPSWAPGRPLAKPSSPPSLSTSPFSTFVGPTSPPLTLRVMPQSLVLARLNQEALPERSDLLARLLLFDRLAIRRFGAGGGGGGGEGGIEGKGGKHQR 487
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|553189547|ref|XP_005855023.1| (hypothetical protein NGA_0402600, partial [Nannochloropsis gaditana CCMP526] >gi|422294035|gb|EKU21335.1| hypothetical protein NGA_0402600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 219.164 bits (557), Expect = 9.627e-67 Identity = 110/117 (94.02%), Postives = 110/117 (94.02%), Query Frame = 0
Query: 1 MYHGHDPPLQHDFYHYGGGEEGDNDGIILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSE-------EEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQ 110
MYHGHDPPLQHDFYHYGGGEEGDNDGIILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSE EEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQ
Sbjct: 1 MYHGHDPPLQHDFYHYGGGEEGDNDGIILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQ 117
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|1214705257|gb|OWZ16983.1| (hypothetical protein PHMEG_0009140 [Phytophthora megakarya]) HSP 1 Score: 104.375 bits (259), Expect = 5.524e-21 Identity = 60/195 (30.77%), Postives = 100/195 (51.28%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGVLAA 222
I++T+ LLPG + + + +H+ SW +L F E E GG R + R +Q + +++ + +G TL M + +G++ L+ +AP WRA++ LG VAE PGVV+ L+KL+ADENISIL+ STY ++ VQ L +A+ C++ ++ +HG++ A
Sbjct: 3 IVTTSNFHATLLPGLVSVVFVPVEHIRHGSWPLLNGCSFDENE------------------GGCVRTDSH-------VCRSKQTEIFSIVAEREGTTLFMDPSGVDMFQRAGMSDLITVAPQSWRAIQIHLGPMVAEFPGVVSFLSKLLADENISILNMSTYDTDVIFVQEQHLEAAISCLQTKLSRGMHGLMEA 172
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|566025663|gb|ETI48574.1| (hypothetical protein F443_07423, partial [Phytophthora parasitica P1569]) HSP 1 Score: 102.834 bits (255), Expect = 6.853e-21 Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGV 219
I++T+ LLPG + + + +H+ SW +L + L+S +E EGG R E + R +Q + +++ D +G TL M + +G+ + +AP WRA++ LG VAE PGVV+ L+KL+AD++ISIL+ STY ++ VQ L +A+ C++ ++ LHG+
Sbjct: 3 IVTTSNFHATLLPGLVSVVFVPAEHIRHGSWPLLNLLLYSGCSFDEN--------EGGCVR-----------TESHV-CRSKQTEIFSIVSDREGTTLFMDPSGIDMFKRAGMEDFITVAPQSWRAIQIHLGPMVAEFPGVVSFLSKLLADDHISILNMSTYDTDVIFVQELHLEAAISCLQSKLSRGLHGL 174
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|301090423|ref|XP_002895426.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098656|gb|EEY56708.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 103.605 bits (257), Expect = 1.282e-20 Identity = 70/226 (30.97%), Postives = 113/226 (50.00%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGVL-AAHAERIGSVRAGTDSEGGSPSYLGSPVKREG 252
I++T+ LLPG + + ++ +H+ SW +L + L+S +E EGG R R R +Q + +++ D +G TL M + +G+ L+ +AP WRA++ LG VAE PGVV+ L+KL+AD++ISIL+ STY ++ VQ L +A+ C++ ++ LHG+ A AE S R T S+ + R G
Sbjct: 3 IVTTSNFHATLLPGLVSVVFVSAEHIRHGSWPLLNLLLYSGCSFDEN--------EGGCLRTE------------RHVCRSKQTEIFSIVSDREGTTLFMDPSGVDMFKHAGMEGLITVAPQSWRAIQIHLGPMVAEFPGVVSFLSKLLADDHISILNMSTYDTDVIFVQELHLEAAISCLQSKLSRGLHGLKEAKDAENALSDRKPTSSDAAESCEEAASASRVG 208
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|567962984|gb|ETK88492.1| (hypothetical protein L915_07255 [Phytophthora parasitica] >gi|568020933|gb|ETL95044.1| hypothetical protein L917_07089 [Phytophthora parasitica] >gi|568051371|gb|ETM48277.1| hypothetical protein L914_07155 [Phytophthora parasitica]) HSP 1 Score: 103.605 bits (257), Expect = 1.476e-20 Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGV 219
I++T+ LLPG + + + +H+ SW +L + L+S +E EGG R E + R +Q + +++ D +G TL M + +G+ + +AP WRA++ LG VAE PGVV+ L+KL+AD++ISIL+ STY ++ VQ L +A+ C++ ++ LHG+
Sbjct: 23 IVTTSNFHATLLPGLVSVVFVPAEHIRHGSWPLLNLLLYSGCSFDEN--------EGGCVR-----------TESHV-CRSKQTEIFSIVSDREGTTLFMDPSGIDMFKRAGMEDFITVAPQSWRAIQIHLGPMVAEFPGVVSFLSKLLADDHISILNMSTYDTDVIFVQELHLEAAISCLQSKLSRGLHGL 194
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|675190233|ref|XP_008904001.1| (hypothetical protein PPTG_09956 [Phytophthora parasitica INRA-310] >gi|566007544|gb|ETI30455.1| hypothetical protein F443_22421 [Phytophthora parasitica P1569] >gi|566025637|gb|ETI48548.1| hypothetical protein F443_07427 [Phytophthora parasitica P1569] >gi|567991689|gb|ETL41890.1| hypothetical protein L916_07202 [Phytophthora parasitica] >gi|568096159|gb|ETN10914.1| hypothetical protein PPTG_09956 [Phytophthora parasitica INRA-310] >gi|570329374|gb|ETO77322.1| hypothetical protein F444_07455 [Phytophthora parasitica P1976] >gi|570953092|gb|ETP18349.1| hypothetical protein F441_07406 [Phytophthora parasitica CJ01A1] >gi|570987596|gb|ETP46260.1| hypothetical protein F442_07460 [Phytophthora parasitica P10297] >gi|970626693|gb|KUF74552.1| GATS protein 3 [Phytophthora nicotianae]) HSP 1 Score: 102.834 bits (255), Expect = 2.272e-20 Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGV 219
I++T+ LLPG + + + +H+ SW +L + L+S +E EGG R E + R +Q + +++ D +G TL M + +G+ + +AP WRA++ LG VAE PGVV+ L+KL+AD++ISIL+ STY ++ VQ L +A+ C++ ++ LHG+
Sbjct: 3 IVTTSNFHATLLPGLVSVVFVPAEHIRHGSWPLLNLLLYSGCSFDEN--------EGGCVR-----------TESHV-CRSKQTEIFSIVSDREGTTLFMDPSGIDMFKRAGMEDFITVAPQSWRAIQIHLGPMVAEFPGVVSFLSKLLADDHISILNMSTYDTDVIFVQELHLEAAISCLQSKLSRGLHGL 174
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|698792592|ref|XP_009829328.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574115985|gb|ETV81470.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 102.064 bits (253), Expect = 2.273e-20 Identity = 69/208 (33.17%), Postives = 101/208 (48.56%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGVLAAHAERIGSVRAGTD 235
++ST+ LLPGEL + I HV W +L + L+ GE A + R QQ + ++++D DG TL + A+ L +H AP WRA++ LG VAE PGVV+ L+KL+A++NISIL+ STY +I VQA +L AV C++ ++ + G L A E +R G D
Sbjct: 7 LVSTSNFHATLLPGELSVIQIPPAHVRACCWPLLNLLLY------------------GECSLNCREADATSGDHI---CRLQQTELFSMVVDNDGITLFVDPNGINMFKAANLQDKIHTAPQHWRAIQIHLGPMVAEFPGVVSFLSKLLAEDNISILNMSTYDTDIIYVQACKLDLAVACLQRKLSRGVTG-LKADMESECELRLGVD 192
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|970664891|gb|KUG01691.1| (GATS protein 3 [Phytophthora nicotianae]) HSP 1 Score: 102.834 bits (255), Expect = 2.383e-20 Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGV 219
I++T+ LLPG + + + +H+ SW +L + L+S +E EGG R E + R +Q + +++ D +G TL M + +G+ + +AP WRA++ LG VAE PGVV+ L+KL+AD++ISIL+ STY ++ VQ L +A+ C++ ++ LHG+
Sbjct: 3 IVTTSNFHATLLPGLVSVVFVPAEHIRHGSWPLLNLLLYSGCSFDEN--------EGGCVR-----------TESHV-CRSKQTEIFSIVSDREGTTLFMDPSGIDMFKRAGMEDFITVAPQSWRAIQIHLGPMVAEFPGVVSFLSKLLADDHISILNMSTYDTDVIFVQELHLEAAISCLQSKLSRGLHGL 174
BLAST of EWM22339.1 vs. NCBI_GenBank
Match: gi|698792590|ref|XP_009829327.1| (hypothetical protein H257_05983 [Aphanomyces astaci] >gi|574115984|gb|ETV81469.1| hypothetical protein H257_05983 [Aphanomyces astaci]) HSP 1 Score: 101.679 bits (252), Expect = 6.625e-20 Identity = 69/208 (33.17%), Postives = 101/208 (48.56%), Query Frame = 0
Query: 28 ILSTAQLDCRLLPGELIIAHIARQHVLQASWIILKVALFSEEEEEEEAEEEEEEEEGGETRGGLERAGGNELNEYRIRTRQQQAPMRALILDGDGATLVMSQAQYKRVVASGLAHLLHLAPSPWRALEFCLGHTVAEVPGVVNHLAKLMADENISILHHSTYSAEIFLVQAPELASAVRCIRERVDAALHGVLAAHAERIGSVRAGTD 235
++ST+ LLPGEL + I HV W +L + L+ GE A + R QQ + ++++D DG TL + A+ L +H AP WRA++ LG VAE PGVV+ L+KL+A++NISIL+ STY +I VQA +L AV C++ ++ + G L A E +R G D
Sbjct: 7 LVSTSNFHATLLPGELSVIQIPPAHVRACCWPLLNLLLY------------------GECSLNCREADATSGDHI---CRLQQTELFSMVVDNDGITLFVDPNGINMFKAANLQDKIHTAPQHWRAIQIHLGPMVAEFPGVVSFLSKLLAEDNISILNMSTYDTDIIYVQACKLDLAVACLQRKLSRGVTG-LKADMESECELRLGVD 192 The following BLAST results are available for this feature:
BLAST of EWM22339.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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