EWM22335.1, cds8335 (CDS) Nannochloropsis gaditana

Overview
NameEWM22335.1
Unique Namecds8335
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:487925..487998 -
Alignment locationKK037248.1:486744..487188 -
Alignment locationKK037248.1:486016..486531 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22335.1
Productmetalloprotease family
Orig transcript idgnl|cribi|Naga_100277g3.2159.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:487925..487998 -
KK037248.1supercontigKK037248.1:486744..487188 -
KK037248.1supercontigKK037248.1:486016..486531 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0004222metalloendopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR019165Peptidase_M76_ATP23
Homology
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|585102833|gb|EWM22335.1| (metalloprotease family [Nannochloropsis gaditana])

HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query:    1 MKYLWEDGILRESRRETFTKKRSTIRRMDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 344
            MKYLWEDGILRESRRETFTKKRSTIRRMDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA
Sbjct:    1 MKYLWEDGILRESRRETFTKKRSTIRRMDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 344          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|553189541|ref|XP_005855021.1| (argonaute 1, partial [Nannochloropsis gaditana CCMP526] >gi|422294033|gb|EKU21333.1| argonaute 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 522.702 bits (1345), Expect = 3.865e-179
Identity = 263/286 (91.96%), Postives = 264/286 (92.31%), Query Frame = 0
Query:   59 QTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 344
            +TLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSE                      CVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA
Sbjct:  457 RTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSE----------------------CVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 720          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|298708919|emb|CBJ30874.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 142.124 bits (357), Expect = 2.114e-37
Identity = 77/137 (56.20%), Postives = 95/137 (69.34%), Query Frame = 0
Query:  120 LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQ--LCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGD 254
            L + C  C  +G A  ARAY+EAPP  VVLCANRL  RRE+EEA+VHELVH YD+ +  ++L  C+ LAYSEVRAAR AEC  T +  +CS+F+K C +STA RST  +FP +GA CV AVF  AY+D  P   H D
Sbjct:   54 LRLVCQTCPRQGPAAAARAYLEAPPPGVVLCANRLGSRREVEEAVVHELVHAYDYLVAGVELLDCQALAYSEVRAARAAECSKTSRSLVCSYFRKNCARSTAVRSTEGLFPGKGAGCVDAVFNAAYQDQRP---HDD 187          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|397594357|gb|EJK56214.1| (hypothetical protein THAOC_23947 [Thalassiosira oceanica])

HSP 1 Score: 130.568 bits (327), Expect = 1.497e-31
Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 0
Query:  118 STLNIKCINC-----AEEGLAMKARAYMEAP-PMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGD 254
            +T+ I+C  C     AEEG    ARAY+  P P+S+VLC+NR   ++E+EE LVHEL+H+YD    QMDL  C+ LAYSEVR+AREAECH    L S+F   C +  AT +T  +F  E  +CVA VF+ A++D+ P    GD
Sbjct:  165 TTIAIECKPCGSSSRAEEG----ARAYVMGPKPLSIVLCSNRTSSQQEIEEVLVHELIHIYDVHSRQMDLRDCRQLAYSEVRSAREAECHGC--LNSFFTGICARDKATEATRNMFADEARSCVAQVFDDAFKDMAPFDKRGD 301          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|301109445|ref|XP_002903803.1| (metalloprotease family M76, putative [Phytophthora infestans T30-4] >gi|262096806|gb|EEY54858.1| metalloprotease family M76, putative [Phytophthora infestans T30-4])

HSP 1 Score: 121.324 bits (303), Expect = 1.437e-29
Identity = 62/159 (38.99%), Postives = 91/159 (57.23%), Query Frame = 0
Query:  108 LAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKK 250
            LA+Q   G  +   ++  C++C ++G    ARA+  APP +VV CANRL   RE+EE +VHEL+H YD  + +MD+T    LA SE+R+ARE+EC+   +L                W   +CV+  A RST+++FP E    V  +FE+ Y D+ P K
Sbjct:   24 LAQQHREGKSAVPAIDFVCLDCRDDGPEGNARAFFSAPPPTVVFCANRLHSVREVEETMVHELIHAYDFTVRKMDITKSDILACSEIRSARESECYQKAKLLETVLPDVEFFKKSARWLNSRCVREHAVRSTSSMFPAEAHDEVDKMFEQCYADLSPFK 182          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|1214672904|gb|OWY96037.1| (Metalloprotease [Phytophthora megakarya])

HSP 1 Score: 120.168 bits (300), Expect = 3.369e-29
Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 0
Query:  108 LAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
            LA+Q   G  +   ++  C++C ++G    ARA+  APP +VV CANRL   RE+EE +VHEL+H YD  + +MD+T    LA SE+R+ARE+EC+   +L                W   +CV+  A RST+++FP E    V  +FE+ Y D  P
Sbjct:   24 LAQQHNEGKSTVPAIDFVCLDCRDDGPEGNARAFFSAPPPTVVFCANRLHSAREVEETMVHELIHAYDFTVRKMDITKSDILACSEIRSARESECYQKAKLLESVLPDVEFFQKSARWLNARCVREHAIRSTSSMFPAEARDEVDKMFEQCYTDHSP 180          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|675198865|ref|XP_008908317.1| (hypothetical protein PPTG_13697 [Phytophthora parasitica INRA-310] >gi|566019971|gb|ETI42882.1| hypothetical protein F443_12053 [Phytophthora parasitica P1569] >gi|567957315|gb|ETK82918.1| hypothetical protein L915_11766 [Phytophthora parasitica] >gi|567985965|gb|ETL36297.1| hypothetical protein L916_11691 [Phytophthora parasitica] >gi|568015352|gb|ETL89529.1| hypothetical protein L917_11555 [Phytophthora parasitica] >gi|568045654|gb|ETM42794.1| hypothetical protein L914_11601 [Phytophthora parasitica] >gi|568091527|gb|ETN06348.1| hypothetical protein PPTG_13697 [Phytophthora parasitica INRA-310] >gi|570323567|gb|ETO71515.1| hypothetical protein F444_12149 [Phytophthora parasitica P1976] >gi|570947400|gb|ETP12657.1| hypothetical protein F441_12019 [Phytophthora parasitica CJ01A1] >gi|570979922|gb|ETP40752.1| hypothetical protein F442_11964 [Phytophthora parasitica P10297])

HSP 1 Score: 120.168 bits (300), Expect = 4.317e-29
Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 0
Query:  106 RGLAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKK 250
            + LA+Q   G  +   ++  C+ C ++G    ARA+  APP +VV CANRL   RE+EE +VHEL+H YD  + +MD+T    LA SE+R+ARE+EC+   +L                W   +CV+  A RST+++FP E    V  +FE+ Y D  P K
Sbjct:   28 KFLAQQHSEGKSTVPAIDFVCLECRDDGPEGNARAFFSAPPPTVVFCANRLHSAREVEETMVHELIHAYDFTVRKMDITKSDILACSEIRSARESECYQKAKLLETVLPNVEFFQKSARWLNARCVREHAVRSTSSMFPAEARDEVDKMFEQCYTDHSPFK 188          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|325183129|emb|CCA17587.1| (metalloprotease family M76 putative [Albugo laibachii Nc14])

HSP 1 Score: 119.013 bits (297), Expect = 1.182e-28
Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 0
Query:  111 QGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECH--------YTPQ------LCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
            Q       +L+  C+ C EEG   KARA+  APP ++V CANRL   RE+EE ++HEL+H YD  +  MD+T    LA SE+RAARE+EC+          P+      +  W  K+CV+  A RST ++FP E    V  + E  Y D  P
Sbjct:   31 QKNAKAKQSLDFVCLMCQEEGPEGKARAFFSAPPPTIVFCANRLHSAREVEETMMHELIHAYDFVVRTMDITNPSILACSEIRAARESECYQKAFALQKLLPESKLLKTMSEWKNKRCVRRHAIRSTQSMFPDEAVDDVDKMLEMCYSDQAP 182          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|673030028|ref|XP_008868975.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574475370|gb|ETW02370.1| hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 117.472 bits (293), Expect = 3.590e-28
Identity = 73/234 (31.20%), Postives = 108/234 (46.15%), Query Frame = 0
Query:   28 MDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECH-------YTPQL------CSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
            MD  +C A+L   +  PRPK L+DA+     QT +N                                                      ++L   C++C  EG+  KARA+  +PP ++VLCANRL    +++E +VHEL+H YD+ +  MDLT    LA SEVR+ARE+EC+         PQL      C W+ K+CV+  A  +T+++FP +    V  VF+  + D  P
Sbjct:    1 MDIPRCDAALHEALKEPRPKKLVDAINAFLKQTKKN--------------------------------------------------ADDPTSLEFICLDCKSEGVEGKARAFFASPP-AIVLCANRLNTTEDVKEVVVHELIHAYDYTVRNMDLTQPAVLACSEVRSARESECYEKAQALCKNPQLTVLLQGCEWWVKKCVKQNAVLATSSLFPNDAEKHVDKVFDACFNDHSP 183          
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|695409914|ref|XP_009525046.1| (hypothetical protein PHYSODRAFT_497133 [Phytophthora sojae] >gi|348682513|gb|EGZ22329.1| hypothetical protein PHYSODRAFT_497133 [Phytophthora sojae])

HSP 1 Score: 116.701 bits (291), Expect = 8.383e-28
Identity = 60/157 (38.22%), Postives = 88/157 (56.05%), Query Frame = 0
Query:  108 LAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
            LA+Q   G      ++  C++C ++G    ARA+  APP +VV CANRL   RE+EE +VHEL+H YD  + +MD+T    LA SE+R+ARE+EC+   +L                W   +CV+  A RST+++FP E    V  +F++ Y D  P
Sbjct:   24 LAQQHREGKSPVPAIDFVCLDCRDDGPEGNARAFFSAPPPTVVFCANRLHSAREVEETMVHELIHAYDFTVRKMDITKSDVLACSEIRSARESECYQKAKLLETVLPDVEFFQKSARWLNARCVREHAVRSTSSMFPAEARDEVDKMFDQCYTDHSP 180          
The following BLAST results are available for this feature:
BLAST of EWM22335.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102833|gb|EWM22335.1|0.000e+0100.00metalloprotease family [Nannochloropsis gaditana][more]
gi|553189541|ref|XP_005855021.1|3.865e-17991.96argonaute 1, partial [Nannochloropsis gaditana CCM... [more]
gi|298708919|emb|CBJ30874.1|2.114e-3756.20conserved unknown protein [Ectocarpus siliculosus][more]
gi|397594357|gb|EJK56214.1|1.497e-3148.25hypothetical protein THAOC_23947 [Thalassiosira oc... [more]
gi|301109445|ref|XP_002903803.1|1.437e-2938.99metalloprotease family M76, putative [Phytophthora... [more]
gi|1214672904|gb|OWY96037.1|3.369e-2938.85Metalloprotease [Phytophthora megakarya][more]
gi|675198865|ref|XP_008908317.1|4.317e-2938.51hypothetical protein PPTG_13697 [Phytophthora para... [more]
gi|325183129|emb|CCA17587.1|1.182e-2840.13metalloprotease family M76 putative [Albugo laibac... [more]
gi|673030028|ref|XP_008868975.1|3.590e-2831.20hypothetical protein, variant 2 [Aphanomyces invad... [more]
gi|695409914|ref|XP_009525046.1|8.383e-2838.22hypothetical protein PHYSODRAFT_497133 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8362rna8362Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications