EWM22335.1, cds8335 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|585102833|gb|EWM22335.1| (metalloprotease family [Nannochloropsis gaditana]) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query: 1 MKYLWEDGILRESRRETFTKKRSTIRRMDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 344
MKYLWEDGILRESRRETFTKKRSTIRRMDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA
Sbjct: 1 MKYLWEDGILRESRRETFTKKRSTIRRMDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 344
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|553189541|ref|XP_005855021.1| (argonaute 1, partial [Nannochloropsis gaditana CCMP526] >gi|422294033|gb|EKU21333.1| argonaute 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 522.702 bits (1345), Expect = 3.865e-179 Identity = 263/286 (91.96%), Postives = 264/286 (92.31%), Query Frame = 0
Query: 59 QTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 344
+TLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSE CVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA
Sbjct: 457 RTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSE----------------------CVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGAGESGGGRLLGGVAKPAPSPASRAATAASLPSRMFPAFPGSSSSPSSSPRVSLFPLSHAQSEGGLAKALAGAFGLGSPGAKEGSRA 720
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|298708919|emb|CBJ30874.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.124 bits (357), Expect = 2.114e-37 Identity = 77/137 (56.20%), Postives = 95/137 (69.34%), Query Frame = 0
Query: 120 LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQ--LCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGD 254
L + C C +G A ARAY+EAPP VVLCANRL RRE+EEA+VHELVH YD+ + ++L C+ LAYSEVRAAR AEC T + +CS+F+K C +STA RST +FP +GA CV AVF AY+D P H D
Sbjct: 54 LRLVCQTCPRQGPAAAARAYLEAPPPGVVLCANRLGSRREVEEAVVHELVHAYDYLVAGVELLDCQALAYSEVRAARAAECSKTSRSLVCSYFRKNCARSTAVRSTEGLFPGKGAGCVDAVFNAAYQDQRP---HDD 187
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|397594357|gb|EJK56214.1| (hypothetical protein THAOC_23947 [Thalassiosira oceanica]) HSP 1 Score: 130.568 bits (327), Expect = 1.497e-31 Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 0
Query: 118 STLNIKCINC-----AEEGLAMKARAYMEAP-PMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGD 254
+T+ I+C C AEEG ARAY+ P P+S+VLC+NR ++E+EE LVHEL+H+YD QMDL C+ LAYSEVR+AREAECH L S+F C + AT +T +F E +CVA VF+ A++D+ P GD
Sbjct: 165 TTIAIECKPCGSSSRAEEG----ARAYVMGPKPLSIVLCSNRTSSQQEIEEVLVHELIHIYDVHSRQMDLRDCRQLAYSEVRSAREAECHGC--LNSFFTGICARDKATEATRNMFADEARSCVAQVFDDAFKDMAPFDKRGD 301
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|301109445|ref|XP_002903803.1| (metalloprotease family M76, putative [Phytophthora infestans T30-4] >gi|262096806|gb|EEY54858.1| metalloprotease family M76, putative [Phytophthora infestans T30-4]) HSP 1 Score: 121.324 bits (303), Expect = 1.437e-29 Identity = 62/159 (38.99%), Postives = 91/159 (57.23%), Query Frame = 0
Query: 108 LAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKK 250
LA+Q G + ++ C++C ++G ARA+ APP +VV CANRL RE+EE +VHEL+H YD + +MD+T LA SE+R+ARE+EC+ +L W +CV+ A RST+++FP E V +FE+ Y D+ P K
Sbjct: 24 LAQQHREGKSAVPAIDFVCLDCRDDGPEGNARAFFSAPPPTVVFCANRLHSVREVEETMVHELIHAYDFTVRKMDITKSDILACSEIRSARESECYQKAKLLETVLPDVEFFKKSARWLNSRCVREHAVRSTSSMFPAEAHDEVDKMFEQCYADLSPFK 182
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|1214672904|gb|OWY96037.1| (Metalloprotease [Phytophthora megakarya]) HSP 1 Score: 120.168 bits (300), Expect = 3.369e-29 Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 0
Query: 108 LAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
LA+Q G + ++ C++C ++G ARA+ APP +VV CANRL RE+EE +VHEL+H YD + +MD+T LA SE+R+ARE+EC+ +L W +CV+ A RST+++FP E V +FE+ Y D P
Sbjct: 24 LAQQHNEGKSTVPAIDFVCLDCRDDGPEGNARAFFSAPPPTVVFCANRLHSAREVEETMVHELIHAYDFTVRKMDITKSDILACSEIRSARESECYQKAKLLESVLPDVEFFQKSARWLNARCVREHAIRSTSSMFPAEARDEVDKMFEQCYTDHSP 180
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|675198865|ref|XP_008908317.1| (hypothetical protein PPTG_13697 [Phytophthora parasitica INRA-310] >gi|566019971|gb|ETI42882.1| hypothetical protein F443_12053 [Phytophthora parasitica P1569] >gi|567957315|gb|ETK82918.1| hypothetical protein L915_11766 [Phytophthora parasitica] >gi|567985965|gb|ETL36297.1| hypothetical protein L916_11691 [Phytophthora parasitica] >gi|568015352|gb|ETL89529.1| hypothetical protein L917_11555 [Phytophthora parasitica] >gi|568045654|gb|ETM42794.1| hypothetical protein L914_11601 [Phytophthora parasitica] >gi|568091527|gb|ETN06348.1| hypothetical protein PPTG_13697 [Phytophthora parasitica INRA-310] >gi|570323567|gb|ETO71515.1| hypothetical protein F444_12149 [Phytophthora parasitica P1976] >gi|570947400|gb|ETP12657.1| hypothetical protein F441_12019 [Phytophthora parasitica CJ01A1] >gi|570979922|gb|ETP40752.1| hypothetical protein F442_11964 [Phytophthora parasitica P10297]) HSP 1 Score: 120.168 bits (300), Expect = 4.317e-29 Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 0
Query: 106 RGLAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKK 250
+ LA+Q G + ++ C+ C ++G ARA+ APP +VV CANRL RE+EE +VHEL+H YD + +MD+T LA SE+R+ARE+EC+ +L W +CV+ A RST+++FP E V +FE+ Y D P K
Sbjct: 28 KFLAQQHSEGKSTVPAIDFVCLECRDDGPEGNARAFFSAPPPTVVFCANRLHSAREVEETMVHELIHAYDFTVRKMDITKSDILACSEIRSARESECYQKAKLLETVLPNVEFFQKSARWLNARCVREHAVRSTSSMFPAEARDEVDKMFEQCYTDHSPFK 188
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|325183129|emb|CCA17587.1| (metalloprotease family M76 putative [Albugo laibachii Nc14]) HSP 1 Score: 119.013 bits (297), Expect = 1.182e-28 Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 111 QGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECH--------YTPQ------LCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
Q +L+ C+ C EEG KARA+ APP ++V CANRL RE+EE ++HEL+H YD + MD+T LA SE+RAARE+EC+ P+ + W K+CV+ A RST ++FP E V + E Y D P
Sbjct: 31 QKNAKAKQSLDFVCLMCQEEGPEGKARAFFSAPPPTIVFCANRLHSAREVEETMMHELIHAYDFVVRTMDITNPSILACSEIRAARESECYQKAFALQKLLPESKLLKTMSEWKNKRCVRRHAIRSTQSMFPDEAVDDVDKMLEMCYSDQAP 182
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|673030028|ref|XP_008868975.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574475370|gb|ETW02370.1| hypothetical protein, variant 2 [Aphanomyces invadans]) HSP 1 Score: 117.472 bits (293), Expect = 3.590e-28 Identity = 73/234 (31.20%), Postives = 108/234 (46.15%), Query Frame = 0
Query: 28 MDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGILRGNTGPGDHGGRERGLAEQGGGGGGSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECH-------YTPQL------CSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
MD +C A+L + PRPK L+DA+ QT +N ++L C++C EG+ KARA+ +PP ++VLCANRL +++E +VHEL+H YD+ + MDLT LA SEVR+ARE+EC+ PQL C W+ K+CV+ A +T+++FP + V VF+ + D P
Sbjct: 1 MDIPRCDAALHEALKEPRPKKLVDAINAFLKQTKKN--------------------------------------------------ADDPTSLEFICLDCKSEGVEGKARAFFASPP-AIVLCANRLNTTEDVKEVVVHELIHAYDYTVRNMDLTQPAVLACSEVRSARESECYEKAQALCKNPQLTVLLQGCEWWVKKCVKQNAVLATSSLFPNDAEKHVDKVFDACFNDHSP 183
BLAST of EWM22335.1 vs. NCBI_GenBank
Match: gi|695409914|ref|XP_009525046.1| (hypothetical protein PHYSODRAFT_497133 [Phytophthora sojae] >gi|348682513|gb|EGZ22329.1| hypothetical protein PHYSODRAFT_497133 [Phytophthora sojae]) HSP 1 Score: 116.701 bits (291), Expect = 8.383e-28 Identity = 60/157 (38.22%), Postives = 88/157 (56.05%), Query Frame = 0
Query: 108 LAEQGGGGGGST--LNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCS--------------WFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 248
LA+Q G ++ C++C ++G ARA+ APP +VV CANRL RE+EE +VHEL+H YD + +MD+T LA SE+R+ARE+EC+ +L W +CV+ A RST+++FP E V +F++ Y D P
Sbjct: 24 LAQQHREGKSPVPAIDFVCLDCRDDGPEGNARAFFSAPPPTVVFCANRLHSAREVEETMVHELIHAYDFTVRKMDITKSDVLACSEIRSARESECYQKAKLLETVLPDVEFFQKSARWLNARCVREHAVRSTSSMFPAEARDEVDKMFDQCYTDHSP 180 The following BLAST results are available for this feature:
BLAST of EWM22335.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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