EWM22348.1, cds8320 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|585102848|gb|EWM22348.1| (protein of unknown function DUF2040 [Nannochloropsis gaditana]) HSP 1 Score: 773.467 bits (1996), Expect = 0.000e+0 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0
Query: 1 MYGQQSGPKKYGLVVPQKKAVPGMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETVDNKDVLDPSSRVVDHGGASHRRGEEADTGKRAAITAPSGEEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTASPADVNPEERKRSKEEAIQKARERFLARKKGEVHNENITES 382
MYGQQSGPKKYGLVVPQKKAVPGMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETVDNKDVLDPSSRVVDHGGASHRRGEEADTGKRAAITAPSGEEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTASPADVNPEERKRSKEEAIQKARERFLARKKGEVHNENITES
Sbjct: 1 MYGQQSGPKKYGLVVPQKKAVPGMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETVDNKDVLDPSSRVVDHGGASHRRGEEADTGKRAAITAPSGEEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTASPADVNPEERKRSKEEAIQKARERFLARKKGEVHNENITES 382
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|298712988|emb|CBJ26890.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.828 bits (377), Expect = 1.382e-37 Identity = 95/222 (42.79%), Postives = 137/222 (61.71%), Query Frame = 0
Query: 28 PRPASAAPRR-PAGSAFSLDDDDSDDNGQEEDG-LASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDV-FVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQ 246
P + APRR PAGS S+ D +SDD ++ G L+ + NK L A S K +K ++ A +DPS++DYD VYD + RE + A A ++EK+ +YI NL + A+++ E DR ++R+L KER+ +D L + + FVTSAYKKKLME +KWE +LE+E +R + +GM F+SNL+TKNIAMG DV+ +A SA+T GSK+
Sbjct: 33 PIGSKPAPRRRPAGST-SVFDANSDDEEEDSKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTK---------TGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKR 244
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|1173950667|gb|OQR98616.1| (hypothetical protein ACHHYP_08311 [Achlya hypogyna]) HSP 1 Score: 127.102 bits (318), Expect = 2.437e-30 Identity = 84/215 (39.07%), Postives = 115/215 (53.49%), Query Frame = 0
Query: 29 RPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVG 243
+PAS P FS+DD + + + + + Q++ Q E A A ASDP+++DYD VYD + A ER A E S+YI L A++++ E DR ERRL KER+E+D L+ D + F+TS+YK+KLME ++W EEE AR E EA G GM F++NLLT NIAMG ++ A SAYT G
Sbjct: 15 KPASTNALAPKPGLFSVDDAPPEPSRKTQ-------RLPPPVPMQAVVGQSKAERAVQEALASDPNVFDYDGVYDSMQA---ERVKQKAAKKVEGVPQSKYINVLLEKAKIREIEHDRIRERRLLKEREEDDKLHGDTEKFITSSYKRKLMEAKRW------EEEDARLAEIEAAQDVTKRGELGMAGFYANLLTNNIAMGGTIE-KATSAYTTG 212
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|802615184|ref|XP_012075050.1| (nuclear speckle splicing regulatory protein 1 isoform X1 [Jatropha curcas] >gi|802615186|ref|XP_012075051.1| nuclear speckle splicing regulatory protein 1 isoform X1 [Jatropha curcas] >gi|1173828647|ref|XP_020535883.1| nuclear speckle splicing regulatory protein 1 isoform X1 [Jatropha curcas] >gi|1173828649|ref|XP_020535884.1| nuclear speckle splicing regulatory protein 1 isoform X1 [Jatropha curcas] >gi|643726851|gb|KDP35472.1| hypothetical protein JCGZ_10865 [Jatropha curcas]) HSP 1 Score: 125.176 bits (313), Expect = 2.211e-29 Identity = 118/374 (31.55%), Postives = 181/374 (48.40%), Query Frame = 0
Query: 9 KKYGLVVPQKKAVPGMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETV-DNKDVLDPSSRVVD-HG-----GASHRRGEEADTGKRAAITAPSGEEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTAS--PADVNP-EERKRSKEEAIQKARERFLARKKG 372
+KYGL +R +P+ PR P + +DD +DN ++E + +A+ NK L K +EE A DPS++DYD VYD++ K + E ++E+K +YI L + AE +++E + YER+LAKER ++D LY DKD FVTSAYKKKL E +W +EEE R+ +EE K S + F+ N L KN+A GA+ + + + K+ E L ++TS + D+K V + SSRV + HG SH+R E+ + +P ++ ++ + KT+S P P + + E+A+ A+ERFLARKK
Sbjct: 2 QKYGL---------QLRVQPQQNKKLPRPPLPVSLGFRNDDDEDNVEKE--ITRQATKNKSL--------KDIEEQHKKALEEDPSVFDYDGVYDDMKQKIAQ----PREQDRQERKP-KYIQTLIKKAEQRQREHEVIYERKLAKERSKDDHLYADKDKFVTSAYKKKLAEQAQW-----MEEERRRQLQEE---KEDVTKKSDLSDFYFN-LGKNVAFGANDRESRQQERQTEIKKPEK-LDDKLDASTSDRGHLLADSKSVFESSSRVKEGHGDETSSSPSHKRNSES-----------------------------LVLMPVSDKPASNSSQEKTSSEQPIANQPMNDHHKRNEDALAAAKERFLARKKA 312
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|1173828651|ref|XP_020535885.1| (nuclear speckle splicing regulatory protein 1 isoform X2 [Jatropha curcas]) HSP 1 Score: 124.02 bits (310), Expect = 2.984e-28 Identity = 118/374 (31.55%), Postives = 181/374 (48.40%), Query Frame = 0
Query: 9 KKYGLVVPQKKAVPGMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETV-DNKDVLDPSSRVVD-HG-----GASHRRGEEADTGKRAAITAPSGEEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTAS--PADVNP-EERKRSKEEAIQKARERFLARKKG 372
+KYGL +R +P+ PR P + +DD +DN ++E + +A+ NK L K +EE A DPS++DYD VYD++ K + E ++E+K +YI L + AE +++E + YER+LAKER ++D LY DKD FVTSAYKKKL E +W +EEE R+ +EE K S + F+ N L KN+A GA+ + + + K+ E L ++TS + D+K V + SSRV + HG SH+R E+ + +P ++ ++ + KT+S P P + + E+A+ A+ERFLARKK
Sbjct: 79 QKYGL---------QLRVQPQQNKKLPRPPLPVSLGFRNDDDEDNVEKE--ITRQATKNKSL--------KDIEEQHKKALEEDPSVFDYDGVYDDMKQKIAQ----PREQDRQERKP-KYIQTLIKKAEQRQREHEVIYERKLAKERSKDDHLYADKDKFVTSAYKKKLAEQAQW-----MEEERRRQLQEE---KEDVTKKSDLSDFYFN-LGKNVAFGANDRESRQQERQTEIKKPEK-LDDKLDASTSDRGHLLADSKSVFESSSRVKEGHGDETSSSPSHKRNSES-----------------------------LVLMPVSDKPASNSSQEKTSSEQPIANQPMNDHHKRNEDALAAAKERFLARKKA 389
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|698794480|ref|XP_009830269.1| (hypothetical protein H257_06655 [Aphanomyces astaci] >gi|574114858|gb|ETV80345.1| hypothetical protein H257_06655 [Aphanomyces astaci]) HSP 1 Score: 121.709 bits (304), Expect = 4.146e-28 Identity = 91/255 (35.69%), Postives = 133/255 (52.16%), Query Frame = 0
Query: 29 RPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKT-----SRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETVDNKDVLDPSSRV 278
+PA + +P+ FS+D+ +S + G AS M QA+ KS E A A DP+++DYD +YD + +R++ KE KK S+YI L A++++ E DR ERRL KER+E+DAL+ +K+ FVT++YK+KLME+++W E+E AR EA GM F++NLLT NIAMG DV A SAYT G+ T LP + + + ++P V
Sbjct: 15 KPAFPSENQPSKGVFSIDEANSAPIATK--GPASLPPPPLMSQARPGVYSKS-ERVAHEALADDPNVFDYDGIYDSMRVERQK--------LKEAKKVHGAPQSKYIGALMEKAKIREVEHDRIRERRLLKEREEDDALHGEKEKFVTASYKRKLMESKRW------EQEDARLAAIEAAN-DVTKREHGMAGFYANLLTNNIAMGGDVS-KATSAYTTGT------LSTKLPESLDALPPSPKRQKAVEPVQHV 244
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|1137223924|gb|OMO89062.1| (hypothetical protein CCACVL1_08030 [Corchorus capsularis]) HSP 1 Score: 120.939 bits (302), Expect = 8.493e-28 Identity = 109/310 (35.16%), Postives = 149/310 (48.06%), Query Frame = 0
Query: 71 QAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETVDNKDVLDPSSRVVDHGGASHRRGEEADTGKRAAITAPSGEEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTAS---PA--DVNPEERKRSKEEAIQKARERFLARKKGEVH 375
QA KA K +EE A DPS++DYD VYDE+ K + A E++ +YI NL + A+ +K EQ+ YE+++AKER +ED LY DKD FVTSAYKKKL E KW LEE R +EE K S + F+ N L KN+A GA+ G ++ E P V +D PSS + GA+ R +E + SG+ F K R P+ + H D +T+S PA + P+ KR ++A+ ARERFLARK+ +V
Sbjct: 47 QASKNKALKDVEEQHKKALEEDPSVFDYDGVYDEMKQK-----IVLPRAQDREERKPKYIQNLIKKADQRKFEQEIVYEKKIAKERSKEDHLYADKDKFVTSAYKKKLAEQAKW-----LEEARIRELKEE---KDDVTKKSDLSDFYFN-LRKNVAFGAN---------DAGPRKSELHTDLVKPEKKDEKEMDVIKRDRSLPSSNAPESSGATDRNRDETN----------SGQNFESKDSR---------PI---DNIHSDTTVQETSSTKQPAVDEPKPDHHKRG-QDAVAAARERFLARKRAKVQ 310
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|1026764500|gb|OAE25304.1| (hypothetical protein AXG93_4620s1180 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 121.324 bits (303), Expect = 1.209e-27 Identity = 116/363 (31.96%), Postives = 175/363 (48.21%), Query Frame = 0
Query: 30 PASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEE--KKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTV---------GSKQQESAFGTSLPSATSTAAETVDNKDVL----DPSSRVVDHGGASHRRGEEADTGKRAAITAPSG--EEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTASPADVN----PEERKRSKEEAIQKARERFLARKK 371
PA+ P FSLDD + + ED +A +A + + ++ + +LE+ D + +DYD +YDE+ K+ A+ +E+ K+ +YI L A+L+ E D +ER LAKER +ED L+ DK+ FVT AYK+KL+E KW DRL+E + + EE KG M F+ NLL+KN+A GA + A+ A ++ G+ Q + T P++ + T + ++ + + S R D G E G A + P+G EE V R +AT P P H A +A A P D P ++SKEE + A+ER+LARKK
Sbjct: 21 PAAKKPLLNKSLPFSLDDSSTQNEYSVEDDIARQAKKKQFAREVELQHKLALEQ--------DANAFDYDGIYDEMKGKQ-------AQPIREDRAKREPKYIGKLLEQAKLRAVEHDIAFERNLAKERAKEDHLFPDKEKFVTKAYKQKLIEQGKWLDEDRLKE--IKEQAEEVTKKG------DMGDFYRNLLSKNVAYGAK-EPEAKKAVSLPEGNMQNEGGTSAQTAELATPAPTSVTDRVSTAEERERVRGRDEQSLRSNDDG------SESVVQGGGAQLMKPAGGVEEMV--RNDVATALPVSAP--------HKAADA--AVPKDEQVPSAPVVGRKSKEEQVLAAKERYLARKK 341
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|1009171164|ref|XP_015866594.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Ziziphus jujuba]) HSP 1 Score: 118.627 bits (296), Expect = 7.285e-27 Identity = 116/362 (32.04%), Postives = 168/362 (46.41%), Query Frame = 0
Query: 23 GMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESA-----FGTSLPSATSTAAETVDNKDVLDPSSRVVD--HGGASHRRGEEADTGKRAAITAPSGEEFVDKRQRL-----ATISPPQLPLPREERHHHDAGEAKTASPADVNPEERKRSKEEAIQKARERFLARKKG 372
G+ RP + P + F +DD +D +E ++ AS NK L K +EE + A DPS++DYD VYDE+ K + A + +++ +YIT L + E +K+EQD YER+L KERK+ED LY +KD FVTSAYKKKL E KW +EEE R+ EE K + + F+ N L KN+A G AR A ++Q+ G + T + + + + SSRV + G S E+ K + T SG V + +++ P + P+ HHH KRS E+A+ A+ERFLARK+
Sbjct: 5 GLNLRPNKNKQPSKPPLPTPFGFGNDDDNDVERE---ISRHASKNKSL--------KDIEEQQRKALEEDPSVFDYDGVYDEMKNK-----AVQPRAQERQERKPKYITALLKKTEERKREQDIVYERKLEKERKKEDHLYAEKDKFVTSAYKKKLAEQAKW-----MEEERLRKIREE---KEDVTKKTDLSDFYFN-LGKNVAFG------ARDAELRKQEKQDELRKAEKHGVETHATTLDKNRSSNTSNSVSESSRVREEHRGETSISERSESSEVKTVSKTTLSGSSEVKPTTNMTVPDNSSVGQPAVEQPKT--HHH------------------KRS-EDAVAAAKERFLARKRA 314
BLAST of EWM22348.1 vs. NCBI_GenBank
Match: gi|1035391219|ref|XP_016902161.1| (PREDICTED: nuclear speckle splicing regulatory protein 1-like isoform X2 [Cucumis melo] >gi|1035391221|ref|XP_016902163.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 117.472 bits (293), Expect = 1.615e-26 Identity = 118/381 (30.97%), Postives = 169/381 (44.36%), Query Frame = 0
Query: 10 KYGLVVPQKKAVPGMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDVFVTSAYKKKLMETQKWETIDRLEEEAARRREEEAGGKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSA--------------YTVGSKQQESAFGTSLPSATSTAAETVDNKDVLDPSSRVVDHGGASHRRGEEADTGKRAAITAPSGEEFVDKRQRLATISPPQLPLPREERHHHDAGEAKTASPADVNPEERKRS----KEEAIQKARERFLARKKG 372
KYGL Q + P + +P+ P PA F DD DDN + E ++ +AS NK L K +EE A DPS++DYD VYDE+ K + A E++ +YI NL + A+ +++EQ+ YER+LAKER ++D LY KD FVTSAYKKKL E KW +EEE R+ EE S D +FS L KN+A GA + R+ + K +ES G + + N ++ S + + AS++ T PS + SPP L HD + +++ + KR E+A+ A+ERFLARK+
Sbjct: 3 KYGL---QLRVKPSQQKQPK----RPPLPAPLGFQ---DDDDDNVERE--ISRQASKNKAL--------KDIEEQHKKALEEDPSVFDYDGVYDEMKEK-----AVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKW-----MEEERLRQLREEKEDVTKKSDMS--DFYFS--LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDTFND------HQLQNSKTIEEHSHLEERLSASNK-------------TTPSD---------IEGTSPPTL---------HDKALVQERPKHELSEQPPKRDHHKRNEDAVAAAKERFLARKRA 312 The following BLAST results are available for this feature:
BLAST of EWM22348.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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