EWM22371.1, cds8302 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|585102872|gb|EWM22371.1| (cdgsh iron sulfur domain-containing protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 438.343 bits (1126), Expect = 9.532e-156 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
Query: 1 MKCVLDTQRSSWLLLLIPHETPHTRTSFLLRFFFLRQVDSALTGKMAAELFKALQGHEVVMAAIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGPADRSLENEYGAEERRGLSSRAFDGKETGSHTLEDPSRGSVCREEGQRMRVRECGPERWTGPGC 210
MKCVLDTQRSSWLLLLIPHETPHTRTSFLLRFFFLRQVDSALTGKMAAELFKALQGHEVVMAAIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGPADRSLENEYGAEERRGLSSRAFDGKETGSHTLEDPSRGSVCREEGQRMRVRECGPERWTGPGC
Sbjct: 1 MKCVLDTQRSSWLLLLIPHETPHTRTSFLLRFFFLRQVDSALTGKMAAELFKALQGHEVVMAAIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGPADRSLENEYGAEERRGLSSRAFDGKETGSHTLEDPSRGSVCREEGQRMRVRECGPERWTGPGC 210
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|1129212604|gb|OLQ13669.1| (Phospho-2-dehydro-3-deoxyheptonate aldolase [Symbiodinium microadriaticum]) HSP 1 Score: 94.7449 bits (234), Expect = 5.168e-19 Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 0
Query: 84 VNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
VNPGI K PKV T+KDIED + K +G VA+CRCWRS FP CDGSH +N+ CGDN GP
Sbjct: 767 VNPGIDKASPKVATVMTVKDIEDALSKSSSGKVALCRCWRSSKFPFCDGSHGKYNEACGDNTGP 830
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|593721164|ref|XP_007106861.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X1 [Physeter catodon]) HSP 1 Score: 83.1889 bits (204), Expect = 4.940e-17 Identity = 40/85 (47.06%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 63 AIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
A V +L + + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 47 AAVGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGD--------KAVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 123
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|593721171|ref|XP_007106864.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X4 [Physeter catodon]) HSP 1 Score: 82.4185 bits (202), Expect = 5.105e-17 Identity = 40/85 (47.06%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 63 AIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
A V +L + + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 22 AAVGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 98
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|527271815|ref|XP_005153767.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Melopsittacus undulatus]) HSP 1 Score: 82.4185 bits (202), Expect = 5.834e-17 Identity = 44/87 (50.57%), Postives = 54/87 (62.07%), Query Frame = 0
Query: 62 AAIVAFLVTAFMILTGRKGGQH-VNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
AA+V +L A+ L+ K + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 23 AAVVGYL--AYRFLSKDKCSKAMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 99
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|466075832|ref|XP_004283415.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Orcinus orca] >gi|470653983|ref|XP_004329753.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X2 [Tursiops truncatus] >gi|548522264|ref|XP_005698204.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X2 [Capra hircus] >gi|594656018|ref|XP_007176385.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Balaenoptera acutorostrata scammoni] >gi|602730954|ref|XP_007450884.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1-like [Lipotes vexillifer]) HSP 1 Score: 82.4185 bits (202), Expect = 6.120e-17 Identity = 40/85 (47.06%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 63 AIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
A V +L + + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 22 AAVGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 98
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|664719919|ref|XP_008517000.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X2 [Equus przewalskii]) HSP 1 Score: 82.0333 bits (201), Expect = 7.656e-17 Identity = 39/85 (45.88%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 63 AIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
A++ +L + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 22 AVIGYLAYKRFYSKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 98
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|556728963|ref|XP_005960207.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein 1-like [Pantholops hodgsonii]) HSP 1 Score: 82.0333 bits (201), Expect = 7.656e-17 Identity = 39/85 (45.88%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 63 AIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
A + +L + + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 22 AAIGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 98
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|593721167|ref|XP_007106862.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X2 [Physeter catodon] >gi|593721169|ref|XP_007106863.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X3 [Physeter catodon]) HSP 1 Score: 82.0333 bits (201), Expect = 8.296e-17 Identity = 40/85 (47.06%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 63 AIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
A V +L + + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 27 AAVGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 103
BLAST of EWM22371.1 vs. NCBI_GenBank
Match: gi|77404223|ref|NP_001029229.1| (CDGSH iron-sulfur domain-containing protein 1 [Bos taurus] >gi|555967735|ref|XP_005895912.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X3 [Bos mutus] >gi|556733846|ref|XP_005962564.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X4 [Pantholops hodgsonii] >gi|742116948|ref|XP_010837944.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Bison bison bison] >gi|803327129|ref|XP_012021727.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 1 isoform X2 [Ovis aries musimon] >gi|110825757|sp|Q3ZBU2.1|CISD1_BOVIN RecName: Full=CDGSH iron-sulfur domain-containing protein 1; AltName: Full=MitoNEET >gi|73587067|gb|AAI03106.1| CDGSH iron sulfur domain 1 [Bos taurus] >gi|296472891|tpg|DAA15006.1| TPA: CDGSH iron sulfur domain-containing protein 1 [Bos taurus]) HSP 1 Score: 82.0333 bits (201), Expect = 9.081e-17 Identity = 39/85 (45.88%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 63 AIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
A + +L + + VNP I+KD PKVV +F M+D+ D CRCWRSK FPLCDGSHT N+ GDNVGP
Sbjct: 22 AAIGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGP 98 The following BLAST results are available for this feature:
BLAST of EWM22371.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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