EWM22379.1, cds8297 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|585102880|gb|EWM22379.1| (tesmin tso1-like cxc domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1891.7 bits (4899), Expect = 0.000e+0 Identity = 952/952 (100.00%), Postives = 952/952 (100.00%), Query Frame = 0
Query: 1 MSEARNGNDTPISSHFMSFAGESEENWGADVASRHMDAEAEHQQEEARQQLGQTTEQADDATVSDVATSDAIQGDHEGKSGEDDRGLGSYVGVEGEGDGRPRDMDRYMEGTGGIGEGDGPRPQPEPARPEEREDGQRQVEYGASKMEKPPAQGLPQLDGGGQQEEEAEARPDDQRAPFQEPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKEDMGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGGGGSSPSSKRRRSGSSGAVPALGSNQGLADQQMPFFHRSLMSPTPTSQRTSPLQGHPAQAGQPDFSAQGLFSLPPGLQPHHSPHPGLLPFFSPGQPVPPGFFEQHALLASQNLQQHQQQQQHQQHQQQLEFIQRQQAQAQAQFFQQLAAQQQQQQQQMQQHPLHQSLSPTQLLLLQAQQQQQLLQQQQAAGGGGGAGGRGQGKSGKKSSEVSGGDDLQEMVQAAEDLAFLKGSSGPGSKNHAEVEAQFAQAQQQQQQQQGAQQPQPPQDQTQQPQQHYMAFAAAAAASGGGGGGGGAGGGAGGGRPGQGQPFFGQQVAFPGNPFLSGSVPSQQLVAPQFLDPAQAAHMAAMYAQMQQFQGGGGGEVADGKKSPGAGQHETV 952
MSEARNGNDTPISSHFMSFAGESEENWGADVASRHMDAEAEHQQEEARQQLGQTTEQADDATVSDVATSDAIQGDHEGKSGEDDRGLGSYVGVEGEGDGRPRDMDRYMEGTGGIGEGDGPRPQPEPARPEEREDGQRQVEYGASKMEKPPAQGLPQLDGGGQQEEEAEARPDDQRAPFQEPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKEDMGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGGGGSSPSSKRRRSGSSGAVPALGSNQGLADQQMPFFHRSLMSPTPTSQRTSPLQGHPAQAGQPDFSAQGLFSLPPGLQPHHSPHPGLLPFFSPGQPVPPGFFEQHALLASQNLQQHQQQQQHQQHQQQLEFIQRQQAQAQAQFFQQLAAQQQQQQQQMQQHPLHQSLSPTQLLLLQAQQQQQLLQQQQAAGGGGGAGGRGQGKSGKKSSEVSGGDDLQEMVQAAEDLAFLKGSSGPGSKNHAEVEAQFAQAQQQQQQQQGAQQPQPPQDQTQQPQQHYMAFAAAAAASGGGGGGGGAGGGAGGGRPGQGQPFFGQQVAFPGNPFLSGSVPSQQLVAPQFLDPAQAAHMAAMYAQMQQFQGGGGGEVADGKKSPGAGQHETV
Sbjct: 1 MSEARNGNDTPISSHFMSFAGESEENWGADVASRHMDAEAEHQQEEARQQLGQTTEQADDATVSDVATSDAIQGDHEGKSGEDDRGLGSYVGVEGEGDGRPRDMDRYMEGTGGIGEGDGPRPQPEPARPEEREDGQRQVEYGASKMEKPPAQGLPQLDGGGQQEEEAEARPDDQRAPFQEPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKEDMGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGGGGSSPSSKRRRSGSSGAVPALGSNQGLADQQMPFFHRSLMSPTPTSQRTSPLQGHPAQAGQPDFSAQGLFSLPPGLQPHHSPHPGLLPFFSPGQPVPPGFFEQHALLASQNLQQHQQQQQHQQHQQQLEFIQRQQAQAQAQFFQQLAAQQQQQQQQMQQHPLHQSLSPTQLLLLQAQQQQQLLQQQQAAGGGGGAGGRGQGKSGKKSSEVSGGDDLQEMVQAAEDLAFLKGSSGPGSKNHAEVEAQFAQAQQQQQQQQGAQQPQPPQDQTQQPQQHYMAFAAAAAASGGGGGGGGAGGGAGGGRPGQGQPFFGQQVAFPGNPFLSGSVPSQQLVAPQFLDPAQAAHMAAMYAQMQQFQGGGGGEVADGKKSPGAGQHETV 952
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|553189382|ref|XP_005854991.1| (tesmin tso1-like cxc domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294067|gb|EKU21367.1| tesmin tso1-like cxc domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0 Identity = 421/459 (91.72%), Postives = 427/459 (93.03%), Query Frame = 0
Query: 163 QEEEAEARPDDQRAPFQEPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKEDMGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGGGGSSPSSKRRRSGSSGAVPALGSNQGLADQQMPFFH-RSLMSPTPTSQR 620
QEEEAEARPDDQRAPFQEPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKEDMGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGGG + ++G + +G + P F RS P P S R
Sbjct: 1 QEEEAEARPDDQRAPFQEPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKEDMGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGGGAPPRPPSADGAAAAGRSRRWEATRGSPTNKCPSFTGRSCPQPPPVSGR 459
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|299472731|emb|CBN80299.2| (TSO1; transcription factor (Partial) [Ectocarpus siliculosus]) HSP 1 Score: 173.326 bits (438), Expect = 5.744e-41 Identity = 75/125 (60.00%), Postives = 85/125 (68.00%), Query Frame = 0
Query: 386 GCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPN--GEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARR 508
GCNCKRS+CLKLYCQCFA Q C SCNC +C N A Q +R +AI ++ERNP AF KFR + VHK GCKCRKSACLKKYCECFN G CS+KC+CVGC+N L Y AA R
Sbjct: 25 GCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNANQESMRLQAINGVLERNPAAFDAKFRETEKHDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVGCRNTVALYSEYRGGGAAAER 149
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|1210530527|dbj|GAX10854.1| (hypothetical protein FisN_31Hh062 [Fistulifera solaris]) HSP 1 Score: 140.198 bits (352), Expect = 5.428e-32 Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 0
Query: 386 GCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPN------GEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQN 491
GC CK++RCLKLYCQCF A+ +C +C C NC N ++ R EAI+ I+ RNP+AF +KF+ + + HK+GCKCRKS+C+KKYCEC+ +CS C C+ C+N
Sbjct: 189 GCTCKKTRCLKLYCQCFQAELYCGSNCRCLNCYNVVAEDAKRKEAIQSILLRNPSAFDSKFKKDAATERAARELAHKLGCKCRKSSCMKKYCECYAGNVKCSANCRCINCKN 300
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|703132136|ref|XP_010105053.1| (hypothetical protein L484_001930 [Morus notabilis] >gi|587916050|gb|EXC03774.1| hypothetical protein L484_001930 [Morus notabilis]) HSP 1 Score: 142.895 bits (359), Expect = 8.419e-32 Identity = 84/202 (41.58%), Postives = 107/202 (52.97%), Query Frame = 0
Query: 310 PAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPAYGSNVTTMDGVAPG---CNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKF-------RPNGEDA-------VHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAG 494
P + P LPA+ T APPLQS + PEV +PV +Q +S+P ++ V P P A + DG CNC+ SRCLKLYC+CFA+ +C CNC NC N R EA+ +ERNPNAF+ K R + ED+ H GC C+KS CLKKYCECF A CS+ C C+ C+N G
Sbjct: 52 PQSQPVLPAQPVT---APPLQSEMQSQPQPPEVAMPVA-TQTSSIP--SARMVKPESPK---ARSRSSEAKDGTPKKQKQCNCRHSRCLKLYCECFASGIYC-DGCNCINCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDSGEVMILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEG 243
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|669146436|ref|XP_008608780.1| (hypothetical protein SDRG_04870 [Saprolegnia diclina VS20] >gi|530739605|gb|EQC37847.1| hypothetical protein SDRG_04870 [Saprolegnia diclina VS20]) HSP 1 Score: 142.895 bits (359), Expect = 1.111e-31 Identity = 67/149 (44.97%), Postives = 81/149 (54.36%), Query Frame = 0
Query: 387 CNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQN--------VAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALA 527
CNCK+S+CLKLYC+CFA+ FC SC C C NT LR EAI +ERNPNAF+ K + +H GC C+KS C KKYCECF AG C D C C+ C+N AG +AV A R TA + V A+
Sbjct: 353 CNCKKSKCLKLYCECFASGGFCDESCKCVGCANTPASEPLRTEAITLTLERNPNAFRPKIKKEETTPIHHNGCHCKKSFCQKKYCECFQAGVPCGDNCKCIDCKNQPGGCAQHTAGRSAAKHKAVPALLRHVTAPKPGTNMVRTTSAVT 501
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|219109951|ref|XP_002176728.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411263|gb|EEC51191.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 139.428 bits (350), Expect = 3.422e-31 Identity = 57/118 (48.31%), Postives = 73/118 (61.86%), Query Frame = 0
Query: 384 APGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDA----------VHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQN 491
A GC CK++RCLKLYCQCF + +C P+C C +C N Q R A++ I+ RNP+AF TKF+ D HK+GCKCRKSAC+KKYCEC+ C+ C C GC+N
Sbjct: 214 AVGCTCKKTRCLKLYCQCFGVKIYCGPNCRCLDCHNVPAQEDARQNAMKVILSRNPHAFDTKFQKTPVDGATVETPSKLLTHKLGCKCRKSACMKKYCECYAGHVYCNTHCRCTGCKN 331
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|1210519389|dbj|GAX21773.1| (hypothetical protein FisN_31Lh062 [Fistulifera solaris]) HSP 1 Score: 138.272 bits (347), Expect = 5.430e-31 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 386 GCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNG----------EDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGC 489
GC CK++RCLKLYCQCF A+ +C +C C +C N + R EAI+ I+ RNP+AF +KF+ +G + HK+GCKCRKS+C+KKYCEC+ RCS C C+ C
Sbjct: 217 GCTCKKTRCLKLYCQCFQAELYCGTNCRCLSCYNVVAEEAKRKEAIQSILLRNPSAFDSKFKKDGVTERSAHELARELAHKLGCKCRKSSCMKKYCECYAGNVRCSSNCRCINC 330
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|1073000994|ref|XP_018451421.1| (PREDICTED: protein tesmin/TSO1-like CXC 5 [Raphanus sativus]) HSP 1 Score: 139.043 bits (349), Expect = 7.038e-31 Identity = 72/168 (42.86%), Postives = 96/168 (57.14%), Query Frame = 0
Query: 331 SVPGGRLLKPEVGLPVVPSQVASL-PPSTSSQVTP-SQPPTLPAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKF--RPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAG 494
S P L+ P V PVV SQ L P+ + +P S+ + G + T CNCK SRCLKLYC+CFA+ ++C CNC NCLN R +A+ ++RNPNAF++K P+G + GC+C+KS CLKKYCECF A CS+ C C+ C+N G
Sbjct: 45 SKPAPTLVTPSVSSPVVTSQSLILNAPTKQPEESPKSRARPVVEEGRDGTPQKKKKKHCNCKLSRCLKLYCECFASGSYCDDGCNCANCLNNVDNEPARRDAVEATLDRNPNAFRSKIASSPHGVMRDNNKGCRCKKSGCLKKYCECFQANVLCSENCGCLDCKNFEG 212
BLAST of EWM22379.1 vs. NCBI_GenBank
Match: gi|1134897443|gb|OMJ94608.1| (hypothetical protein SteCoe_2258 [Stentor coeruleus]) HSP 1 Score: 132.494 bits (332), Expect = 1.008e-30 Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = 0
Query: 382 GVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTK----FRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNV 492
G C C +S+CLKLYC+CF+ +C CNC NC NT ++R EA+ ++ERNPNAF K F AVH GC C KSACLK YCECF +GA CSD C C GC+N+
Sbjct: 146 GTKISCTCPKSKCLKLYCECFSRGNYC-EDCNCVNCHNTLEFENVRREAMSSLLERNPNAFHPKISTVFGDGVTQAVHSKGCHCTKSACLKNYCECFQSGAVCSDMCQCTGCKNI 259 The following BLAST results are available for this feature:
BLAST of EWM22379.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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