EWM22361.1, cds8290 (CDS) Nannochloropsis gaditana

Overview
NameEWM22361.1
Unique Namecds8290
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:360324..361901 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22361.1
Productprogrammed cell death protein 2
Orig transcript idgnl|cribi|Naga_100066g4.10318.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:360324..361901 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
IPR007320PDCD2_C
Homology
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|585102862|gb|EWM22361.1| (programmed cell death protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 1079.7 bits (2791), Expect = 0.000e+0
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0
Query:    1 MVVEPTGIMDGDETQAGMTPSTIKIPVDCRRMLTKEEGWNSGTDSKYRCEAKGSGRGKDVSPTSTSPLLVPVADTEIKRKVGCIGEDGRSSDDSSDDDGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKTGHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKPMA 525
            MVVEPTGIMDGDETQAGMTPSTIKIPVDCRRMLTKEEGWNSGTDSKYRCEAKGSGRGKDVSPTSTSPLLVPVADTEIKRKVGCIGEDGRSSDDSSDDDGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKTGHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKPMA
Sbjct:    1 MVVEPTGIMDGDETQAGMTPSTIKIPVDCRRMLTKEEGWNSGTDSKYRCEAKGSGRGKDVSPTSTSPLLVPVADTEIKRKVGCIGEDGRSSDDSSDDDGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKTGHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKPMA 525          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|553187168|ref|XP_005854556.1| (programmed cell death protein 2 [Nannochloropsis gaditana CCMP526] >gi|422294503|gb|EKU21803.1| programmed cell death protein 2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 503.442 bits (1295), Expect = 8.979e-174
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
Query:  276 KVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKPMA 525
            KVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKPMA
Sbjct:  121 KVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKPMA 370          

HSP 2 Score: 247.669 bits (631), Expect = 9.186e-74
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
Query:   85 GEDGRSSDDSSDDDGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVK 199
            GEDGRSSDDSSDDDGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPG V+
Sbjct:    9 GEDGRSSDDSSDDDGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGKVE 123          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|298714742|emb|CBJ25641.1| (pcdc2/rp-8 (programmed cell death protein 2) [Ectocarpus siliculosus])

HSP 1 Score: 253.832 bits (647), Expect = 5.262e-75
Identity = 173/463 (37.37%), Postives = 223/463 (48.16%), Query Frame = 0
Query:   98 DGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPR---DIRKNGGRIKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKT-GHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSE-------TDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQV-------QAPGHLQLG------------SLDWGTLAVYTCVKSCRTGEKVT---GIEEGTGGEEGR----YVEEFVWRQKP 523
            D + G+QLG V  L   + + +LF++ DW DWDGGK GG P+WLNPRDLP  + + C  C  PLSF++Q+YCPLD  ++AFHR LYVF C K  C     VKALRCQLPR+N FY  +P     I     +         + C VCG  A   C+ C+   YC  +HQ   WKT GHK  C        +  G G       T+G + A +      +A                S F E+E+ +  E        D R   A+  L+ +      S+        DDD+ L Q  L++  G    + D  +L+FL      P Q++RY     A  LW S    P  + D+P C  CG  R FEFQVMP LLHHL VDA V       +A  H + G             +DWGTLAVYTC  SC    + T   G++E    EEG     YVEEFVWRQ P
Sbjct:   31 DEETGVQLGTVLPLEVSLADSVLFKNVDWHDWDGGKAGGWPVWLNPRDLPAPQDMRCGECSHPLSFLVQLYCPLDHEDDAFHRCLYVFCCPKASCSKNSSVKALRCQLPRENDFYPYEPSHKASILAKQQKGSDPETWGAKLCCVCGQSAKSACSKCRIARYCGREHQALHWKTGGHKKAC-------ASDNGAGTIAAPKSTAGTLHARTTPKTLVSA----------------SVFREFEVEVRPEPPPPPPAPDGRT--AENVLMGQMGLEGSSDDGEPADGEDDDSKLSQAELDKVAGVH-GVKDKTTLQFLTRTQANP-QVVRYDA-VGAGPLWSSSKNIPEEA-DVPPCARCGRTRKFEFQVMPHLLHHLGVDANVNVKALDTKAAAHRREGPGAAAPPLITGECMDWGTLAVYTCPDSCPAVTQNTARGGVDE---DEEGPPVVGYVEEFVWRQPP 461          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|1173941029|gb|OQR90284.1| (programmed cell death protein 2 [Thraustotheca clavata])

HSP 1 Score: 240.736 bits (613), Expect = 1.206e-70
Identity = 153/437 (35.01%), Postives = 216/437 (49.43%), Query Frame = 0
Query:   98 DGDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRD-IRKNGGRIKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKTGHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETD------DDASLDQQHLNQATGAKLALT---DALSLRFLAVIGRYPAQILRYARWDDAA-ALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKP 523
            D +  ++LGFV  + EE  +        + +WDGGKVGG+P+WL+P       + +   C   +SF+LQIYCPLD P +AFHR+LYVF C+   C   G  +  R QLP++N FY+    D  RK    +K     A + C VCGL+    C+ C    YC+  HQK+ WK GHK DC    ++K   E   +    N    G P                             FPEY I IE E       R   + +++A +++ ++   ++ T+      DD+ +D   L+Q   AK+  T   D   + FL  +     Q+LRY+RWDD    LWV   ++P   TDIP C +C   R FEFQ+MPQLL+HL++  ++     L+   +DWGTL VYTC +SC   +K   I           VEEFVWRQ P
Sbjct:   37 DAEAEIELGFVSNVEEEHLSGA------YVNWDGGKVGGQPVWLDPS----VNIEVPCECGVNMSFLLQIYCPLDTPPQAFHRSLYVFCCRTRGCSKIGHARVFRVQLPQKNAFYSEKEDDPTRKQPEYLK-----AAKQCAVCGLKGIFACSACNIAQYCSKVHQKDHWKHGHKQDCPASAQQKKLIESNAEAIRLN----GTPF---------------------------VFPEYSIHIEHE-----PDRSIAQNESEARMMQAFEQASLNRTEGNDVFTDDSEID---LSQKDIAKMLGTQAQDKTYVGFLTRVALAKDQVLRYSRWDDEEPVLWVHSQDKP---TDIPCCSICHGPRRFEFQIMPQLLYHLKLSTELTT---LKDQEVDWGTLVVYTCPQSCSAKDKDVDI-----------VEEFVWRQSP 402          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|301106410|ref|XP_002902288.1| (programmed cell death protein 2, putative [Phytophthora infestans T30-4] >gi|262098908|gb|EEY56960.1| programmed cell death protein 2, putative [Phytophthora infestans T30-4])

HSP 1 Score: 237.654 bits (605), Expect = 1.173e-69
Identity = 152/399 (38.10%), Postives = 207/399 (51.88%), Query Frame = 0
Query:  103 MQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRD--LPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAA-LAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKT-GHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDARE--QDADAALLEKYKHVI--VSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSC 493
            ++LGFV   P  +  + L  +PDW  WDGG++GG+P WL P    +P  + L C  C  PLSF+LQIYCPLDE E+AFHR+LYVFVC+   C   G  KA R QLPR N FYA++       GG ++ ++    V  C +CG RA   C+ C    YC+  HQK+ W   GHK  C +     L  E   + RG  +T G                             +  FPE+++ I+ E        D+RE   + +A L+ +++       E D D  + Q+ LN A G      D   +RFL  +     Q+LRY+RW++ A LWV  +     S D+P C  CG  R FEFQV+PQLL++L VD Q  + G +   S +WGTLAVYTC KSC
Sbjct:   18 VELGFVCDDPVTVDAKPLHCEPDWTKWDGGQIGGRPSWLVPSTSGIPSTEQLQCVKCHSPLSFLLQIYCPLDELEDAFHRSLYVFVCRSPGCSRQGDGKAFRLQLPRNNAFYAAE-------GGAMQPKSTETNVDLCALCGQRATFTCSACHVAQYCSKAHQKDHWTAGGHKQTCAQSLETHLLVE-SEETRGQMITKGS----------------------------KWVFPEHDLEIDHE-------PDSREAANEYEAKLMAEFEKSAKEEDEDDMDMDVTQRELNDALG-HTKDQDPQYVRFLTRVALAKDQVLRYSRWEEGAVLWVHSE--GMHSGDVPPCERCGGERKFEFQVLPQLLNYLGVDHQ-SSLGDISSRSCEWGTLAVYTCAKSC 369          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|673019774|ref|XP_008863848.1| (hypothetical protein H310_02197 [Aphanomyces invadans] >gi|574480762|gb|ETW07755.1| hypothetical protein H310_02197 [Aphanomyces invadans])

HSP 1 Score: 238.424 bits (607), Expect = 2.136e-69
Identity = 161/432 (37.27%), Postives = 221/432 (51.16%), Query Frame = 0
Query:   99 GDRGMQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRDLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKTGHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDA-SLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDA-AALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRV--DAQVQAPGHLQLG--SLDWGTLAVYTCVKSCRTGEKVTGIEEGTGGEEGRYVEEFVWRQKPM 524
            GD  ++LGF+       +  +    P + DWDGGKVGG P+WL+P      K   C  C   +SF+LQIYCPLD P++AFHR+LY+F C+   C   G  +  RCQLP+ NLFYA+   D+     R       +++ C +CGL+A   C+ C    YC+ +HQK+ WK GHK DC +    +   E    E    L   G  +  + P  A   D   PA S  +N       E +++   ER Q+ + R A +Q+ D              TDD A  + Q+ L+   G+  A+ D   L FL  +     Q+LRY RW++  A LWV  ++RPA   +IP+C  CGA R FEFQVMPQLL+HL++  D  +++          LDWGTL VYTC  SC  G   T             VEEFVWRQ P+
Sbjct:   43 GDMEVELGFLG------EKEVHLHGP-YGDWDGGKVGGSPVWLHPNTHVDVK---CNGCDKSMSFLLQIYCPLDHPDQAFHRSLYLFCCRTSDCARLGHARVFRCQLPQDNLFYANH-EDVNY---RPLDHVDRSLKRCALCGLKAMFSCSACHVAHYCSKEHQKDHWKHGHKQDCPQCLALQELFE--DVEHATTLEDNG--SKYLFPEYAIHID-PEPASSVAQNT-----TEAKMMEAFERAQS-SRRVASDQNEDVF------------TDDSAIDISQKDLSALLGSSPAV-DKTYLAFLTRVALAKDQVLRYCRWNEQDAVLWVHSNDRPA---EIPACSSCGAPRLFEFQVMPQLLYHLKLAGDDSIESLAATTNAKRELDWGTLVVYTCPNSCSQGRHDT----------VDLVEEFVWRQSPL 423          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|1214711133|gb|OWZ22165.1| (Programmed cell death protein 2 [Phytophthora megakarya])

HSP 1 Score: 235.728 bits (600), Expect = 1.539e-68
Identity = 149/400 (37.25%), Postives = 210/400 (52.50%), Query Frame = 0
Query:  103 MQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPRD--LPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKTGHKLDCRKVEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDARE--QDADAALLEKY-----KHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSC 493
            ++LGFV   P  +    L  +PDW  WDGG+VGG+P WL P    +P  + L C  C+ PLSF+LQIYCPLDE E+AFHR+LYVFVC+   C   G  K  R QLP+ N FYA++        G  + +A   +  C +CG RA   C+ C    YC   HQK+ W  GHK +C +     +  E   + R   +T G   +  V P Q    D    +   V         E+E   +++ ++ D   D+RE   + +A L+ ++     +     E + D  + Q+ LN+A G      D   +RFL  +     Q+LRY+RW++ A LWV  +     + D+P C  CG  R FEFQV+PQLL++L VD Q  + G +   S +WGTLAVYTC KSC
Sbjct:   18 VELGFVCDDPVSINATPLHCEPDWTKWDGGQVGGRPSWLIPSTSCIPSTEHLQCDECKCPLSFLLQIYCPLDEEEDAFHRSLYVFVCRATGCSRQGDGKTFRLQLPKDNAFYAAE-------SGATELKAT-KMDLCTLCGQRATFTCSACHVAQYCCKAHQKDHWTAGHKQNCPQCLETHMLVE-SDEAREKMITKG---SKWVFPEQDLEIDHEPDSREAVNEYEAKLMAEFE---KKQDLEIDHEPDSREAVNEYEAKLMAEFEKNKDQKEGEDEEEMDMDVTQRELNEALG-HTKDQDPQYVRFLTRVTLAKDQVLRYSRWENEAVLWVHSE--SMHTGDVPPCERCGGERKFEFQVLPQLLNYLGVDQQ-GSLGDITSRSCEWGTLAVYTCTKSC 398          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|567967013|gb|ETK92201.1| (hypothetical protein L915_04382 [Phytophthora parasitica])

HSP 1 Score: 231.106 bits (588), Expect = 2.898e-67
Identity = 148/396 (37.37%), Postives = 203/396 (51.26%), Query Frame = 0
Query:  103 MQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPR--DLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAAL-AVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKT-GHKLDCRK-VEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSC 493
            ++LGF+   P  +  + L  +PDW  WDGG+VGG+P WL P    +P  + L C  CQ PLSF+LQIYCPLD+ E+AFHR+LYVFVC+   C   G  KA R QLP+ N FYA++       GG ++ ++    V  C +CG RA   C+ C    YC+  HQK+ W   GHK  C + +E + L      +E+  +  S  V                              FPE ++ I+ E    +AV +  E    A   +        E D D  + Q+ LN A G      D   +RFL  +     Q+LRY+RW++ A LWV  +     + D+P C  CG  R FEFQV+PQLL++L VD Q  + G +   S +WGTLAVYTC KSC
Sbjct:   18 VELGFICDEPVALDTKPLHCEPDWTKWDGGQVGGRPSWLIPSTSSIPSTEQLQCVECQSPLSFLLQIYCPLDDEEDAFHRSLYVFVCRSPGCSRQGDGKAFRLQLPKDNAFYAAE-------GGSMQLKSIEPKVDLCALCGQRATFTCSACHVAQYCSKAHQKDHWTIGGHKQTCAQCLETQSLVESEEAREKMISKGSKWV------------------------------FPEQDLEIDHEPDSREAVNE-YEAKLMAEFEKNKDKKDEGEDDMDMDVTQRELNDALG-HTKDQDPQYVRFLTRVALAKDQVLRYSRWENEAVLWVHSE--GMHTGDVPPCERCGGERKFEFQVLPQLLNYLGVDHQ-SSLGDITSRSCEWGTLAVYTCAKSC 371          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|566029402|gb|ETI52313.1| (hypothetical protein F443_04509 [Phytophthora parasitica P1569] >gi|568024729|gb|ETL98757.1| hypothetical protein L917_04226 [Phytophthora parasitica] >gi|570333132|gb|ETO81080.1| hypothetical protein F444_04536 [Phytophthora parasitica P1976])

HSP 1 Score: 231.106 bits (588), Expect = 4.530e-67
Identity = 148/396 (37.37%), Postives = 203/396 (51.26%), Query Frame = 0
Query:  103 MQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPR--DLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAAL-AVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKT-GHKLDCRK-VEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSC 493
            ++LGF+   P  +  + L  +PDW  WDGG+VGG+P WL P    +P  + L C  CQ PLSF+LQIYCPLD+ E+AFHR+LYVFVC+   C   G  KA R QLP+ N FYA++       GG ++ ++    V  C +CG RA   C+ C    YC+  HQK+ W   GHK  C + +E + L      +E+  +  S  V                              FPE ++ I+ E    +AV +  E    A   +        E D D  + Q+ LN A G      D   +RFL  +     Q+LRY+RW++ A LWV  +     + D+P C  CG  R FEFQV+PQLL++L VD Q  + G +   S +WGTLAVYTC KSC
Sbjct:   18 VELGFICDEPVALDTKPLHCEPDWTKWDGGQVGGRPSWLIPSTSSIPSTEQLQCVECQSPLSFLLQIYCPLDDEEDAFHRSLYVFVCRSPGCSRQGDGKAFRLQLPKDNAFYAAE-------GGSMQLKSIEPKVDLCALCGQRATFTCSACHVAQYCSKAHQKDHWTIGGHKQTCAQCLETQSLVESEEAREKMISKGSKWV------------------------------FPEQDLEIDHEPDSREAVNE-YEAKLMAEFEKNKDKKDEGEDDMDMDVTQRELNDALG-HTKDQDPQYVRFLTRVALAKDQVLRYSRWENEAVLWVHSE--GMHTGDVPPCERCGGERKFEFQVLPQLLNYLGVDHQ-SSLGDITSRSCEWGTLAVYTCAKSC 371          
BLAST of EWM22361.1 vs. NCBI_GenBank
Match: gi|567995448|gb|ETL45584.1| (hypothetical protein L916_04353 [Phytophthora parasitica] >gi|568055170|gb|ETM51925.1| hypothetical protein L914_04331 [Phytophthora parasitica] >gi|570957151|gb|ETP22130.1| hypothetical protein F441_04485 [Phytophthora parasitica CJ01A1] >gi|570992535|gb|ETP50022.1| hypothetical protein F442_04550 [Phytophthora parasitica P10297])

HSP 1 Score: 230.72 bits (587), Expect = 6.226e-67
Identity = 148/396 (37.37%), Postives = 203/396 (51.26%), Query Frame = 0
Query:  103 MQLGFVERLPEEMQNRLLFQDPDWRDWDGGKVGGKPIWLNPR--DLPPQKLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGCVKALRCQLPRQNLFYASDPRDIRKNGGRIKGRAAL-AVRTCDVCGLRADKVCAGCKRVSYCTPKHQKEGWKT-GHKLDCRK-VEREKLATEGGGQERGANLTSGGVPASSVNPPQANAPDLGRPADSGVKNALRSTFPEYEIVIEEERVQNDAVRDAREQDADAALLEKYKHVIVSETDDDASLDQQHLNQATGAKLALTDALSLRFLAVIGRYPAQILRYARWDDAAALWVSRDERPASSTDIPSCPLCGARRAFEFQVMPQLLHHLRVDAQVQAPGHLQLGSLDWGTLAVYTCVKSC 493
            ++LGF+   P  +  + L  +PDW  WDGG+VGG+P WL P    +P  + L C  CQ PLSF+LQIYCPLD+ E+AFHR+LYVFVC+   C   G  KA R QLP+ N FYA++       GG ++ ++    V  C +CG RA   C+ C    YC+  HQK+ W   GHK  C + +E + L      +E+  +  S  V                              FPE ++ I+ E    +AV +  E    A   +        E D D  + Q+ LN A G      D   +RFL  +     Q+LRY+RW++ A LWV  +     + D+P C  CG  R FEFQV+PQLL++L VD Q  + G +   S +WGTLAVYTC KSC
Sbjct:   18 VELGFICDEPVALDTKPLHCEPDWTKWDGGQVGGRPSWLIPSTSSIPSTEQLQCVECQSPLSFLLQIYCPLDDEEDAFHRSLYVFVCRSPGCSRQGDGKAFRLQLPKDNAFYAAE-------GGAMQLKSIEPKVDLCALCGQRATFTCSACHVAQYCSKAHQKDHWTIGGHKQTCAQCLETQSLVESEEAREKMISKGSKWV------------------------------FPEQDLEIDHEPDSREAVNE-YEAKLMAEFEKNKDKKDEGEDDMDMDVTQRELNDALG-HTKDQDPQYVRFLTRVALAKDQVLRYSRWENEAVLWVHSE--GMHTGDVPPCERCGGERKFEFQVLPQLLNYLGVDHQ-SSLGDITSRSCEWGTLAVYTCAKSC 371          
The following BLAST results are available for this feature:
BLAST of EWM22361.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102862|gb|EWM22361.1|0.000e+0100.00programmed cell death protein 2 [Nannochloropsis g... [more]
gi|553187168|ref|XP_005854556.1|8.979e-174100.00programmed cell death protein 2 [Nannochloropsis g... [more]
gi|298714742|emb|CBJ25641.1|5.262e-7537.37pcdc2/rp-8 (programmed cell death protein 2) [Ecto... [more]
gi|1173941029|gb|OQR90284.1|1.206e-7035.01programmed cell death protein 2 [Thraustotheca cla... [more]
gi|301106410|ref|XP_002902288.1|1.173e-6938.10programmed cell death protein 2, putative [Phytoph... [more]
gi|673019774|ref|XP_008863848.1|2.136e-6937.27hypothetical protein H310_02197 [Aphanomyces invad... [more]
gi|1214711133|gb|OWZ22165.1|1.539e-6837.25Programmed cell death protein 2 [Phytophthora mega... [more]
gi|567967013|gb|ETK92201.1|2.898e-6737.37hypothetical protein L915_04382 [Phytophthora para... [more]
gi|566029402|gb|ETI52313.1|4.530e-6737.37hypothetical protein F443_04509 [Phytophthora para... [more]
gi|567995448|gb|ETL45584.1|6.226e-6737.37hypothetical protein L916_04353 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8317rna8317Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications