EWM22409.1, cds8283 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|585102913|gb|EWM22409.1| (beta-hydroxylase [Nannochloropsis gaditana]) HSP 1 Score: 1060.44 bits (2741), Expect = 0.000e+0 Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query: 1 MPQLAWHLLPVSDIKEFLSLCRPCVGWLPLKHASSLFTLFVVDSEDTCRSTHDRKNAAVAACVRLGIHIHPLYTSEITMGSTGLLKPTSCETMLYCNDSATLPLRPGALDCVVFRVKDSSVGALHSSVTQLASYLTADKLTPSLFCVVIPGYLTVDVLVAIEETFNLLLAPSFSSSPLRKDAGLRIVTLRQLTPDKVWQCGPCVLGSVGNSPDSNGGTFGLVQLQRHSLAASSTEPEATTSPSNNPTLDSRMRLLHLLETSLYLDLHAPGVSGSHASHSPAVSRVPASGAPVLSAEDWDYLLPPTPSTCSLHLPNYYDDWRRHYPALRLLLENFDILRAEAAGVSSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAFQ 522
MPQLAWHLLPVSDIKEFLSLCRPCVGWLPLKHASSLFTLFVVDSEDTCRSTHDRKNAAVAACVRLGIHIHPLYTSEITMGSTGLLKPTSCETMLYCNDSATLPLRPGALDCVVFRVKDSSVGALHSSVTQLASYLTADKLTPSLFCVVIPGYLTVDVLVAIEETFNLLLAPSFSSSPLRKDAGLRIVTLRQLTPDKVWQCGPCVLGSVGNSPDSNGGTFGLVQLQRHSLAASSTEPEATTSPSNNPTLDSRMRLLHLLETSLYLDLHAPGVSGSHASHSPAVSRVPASGAPVLSAEDWDYLLPPTPSTCSLHLPNYYDDWRRHYPALRLLLENFDILRAEAAGVSSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAFQ
Sbjct: 1 MPQLAWHLLPVSDIKEFLSLCRPCVGWLPLKHASSLFTLFVVDSEDTCRSTHDRKNAAVAACVRLGIHIHPLYTSEITMGSTGLLKPTSCETMLYCNDSATLPLRPGALDCVVFRVKDSSVGALHSSVTQLASYLTADKLTPSLFCVVIPGYLTVDVLVAIEETFNLLLAPSFSSSPLRKDAGLRIVTLRQLTPDKVWQCGPCVLGSVGNSPDSNGGTFGLVQLQRHSLAASSTEPEATTSPSNNPTLDSRMRLLHLLETSLYLDLHAPGVSGSHASHSPAVSRVPASGAPVLSAEDWDYLLPPTPSTCSLHLPNYYDDWRRHYPALRLLLENFDILRAEAAGVSSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAFQ 522
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|635366922|emb|CCI44810.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 207.994 bits (528), Expect = 1.039e-59 Identity = 104/213 (48.83%), Postives = 141/213 (66.20%), Query Frame = 0
Query: 312 HLPNYYDDWRRHYPALRLLLENFDILRAEAAGVS---SWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
HL N+Y+ + +P L +L EN+ I+ E A +W WPE H+ E WR++PF +TFPA D + W+ +TC++CP V++LQSL P LRTAL S+LGP T LSAH GW DL+NH+LRVHL+LV P L +G C V E + H E + IVFDDSK+H A+N HP+++R+VLI+DL RP ++ G A GGHT ELD+F+ F
Sbjct: 68 HLQNFYN-YADIFPELLILKENYSIILEEMAAAEKSKNWPIWPENHYVSESRE--WRILPFCYTFPAFDASKTTWVDATCSQCPKTVKILQSL-PNLRTALFSKLGPATCLSAHRGWADLSNHILRVHLSLVVPKLS-DGSPCCSMVVGNEAQVHEEGELIVFDDSKLHYAYNRHPSKTRVVLIVDLHRPDHIPRGRARGGHTNELDEFVKVF 275
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|675188945|ref|XP_008903357.1| (hypothetical protein PPTG_10414 [Phytophthora parasitica INRA-310] >gi|568096827|gb|ETN11574.1| hypothetical protein PPTG_10414 [Phytophthora parasitica INRA-310] >gi|970631438|gb|KUF78047.1| Aspartate beta-hydroxylase domain-containing protein 2 [Phytophthora nicotianae] >gi|970651517|gb|KUF90324.1| Aspartate beta-hydroxylase domain-containing protein 2 [Phytophthora nicotianae]) HSP 1 Score: 215.312 bits (547), Expect = 2.636e-59 Identity = 106/211 (50.24%), Postives = 142/211 (67.30%), Query Frame = 0
Query: 314 PNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
PNYY ++ +P L L +N++++ E V ++W WPE H+ +G +++WRV PF +TFPA D + W+ +TC+ CP ++L+SL P +RTAL S+LGP+T L+AH GW DLANHVLRVH LV P L PNG C V GE H ER+FIVFDDSK+H AFN HP E+R+VLI+D RP + G A GGH++ELD+FI F
Sbjct: 351 PNYYP-YQELFPQLDTLKDNYNVILEEMQAVQQMATWPFWPEKHYTEG--DSEWRVFPFCYTFPAYDASKTTWVSTTCSMCPRTAEILKSL-PNIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPRL-PNGDPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDETRLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 556
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|953494613|emb|CEG44207.1| (conserved hypothetical protein [Plasmopara halstedii]) HSP 1 Score: 214.542 bits (545), Expect = 3.364e-59 Identity = 107/212 (50.47%), Postives = 139/212 (65.57%), Query Frame = 0
Query: 313 LPNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
+PNYY ++ +P L L +NFD++ E V + W WPE H+ +G +++WRV PF +TFPA D + W+PSTC CP ++L+SL P +RTAL S+LGP+ L+AH GW DLANHVLRVH L+ P L NG C V GE H ER FIVFDDSK+H AFN HP +R+VLI+D RP ++ G A GGHT+ELD+FI F
Sbjct: 338 MPNYYP-YQDLFPQLDRLKKNFDVILKEMQAVQEIAKWPFWPEKHYNEG--DSEWRVFPFCYTFPAFDASKTTWVPSTCLMCPRTTEILKSL-PNIRTALFSKLGPNMTLTAHRGWADLANHVLRVHFPLIVPTLF-NGDPCCAMVVGGETCYHSERKFIVFDDSKLHYAFNHHPEATRLVLIVDFYRPDHLPKGRARGGHTDELDEFIENF 544
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|567965099|gb|ETK90572.1| (hypothetical protein L915_05693 [Phytophthora parasitica] >gi|570955285|gb|ETP20471.1| hypothetical protein F441_05831 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 215.312 bits (547), Expect = 3.379e-59 Identity = 106/211 (50.24%), Postives = 142/211 (67.30%), Query Frame = 0
Query: 314 PNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
PNYY ++ +P L L +N++++ E V ++W WPE H+ +G +++WRV PF +TFPA D + W+ +TC+ CP ++L+SL P +RTAL S+LGP+T L+AH GW DLANHVLRVH LV P L PNG C V GE H ER+FIVFDDSK+H AFN HP E+R+VLI+D RP + G A GGH++ELD+FI F
Sbjct: 372 PNYYP-YQELFPQLDTLKDNYNVILEEMQAVQQMATWPFWPEKHYTEG--DSEWRVFPFCYTFPAYDASKTTWVSTTCSMCPRTAEILKSL-PNIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPTL-PNGDPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDETRLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 577
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|567993812|gb|ETL43982.1| (hypothetical protein L916_05631 [Phytophthora parasitica]) HSP 1 Score: 215.312 bits (547), Expect = 3.633e-59 Identity = 106/211 (50.24%), Postives = 142/211 (67.30%), Query Frame = 0
Query: 314 PNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
PNYY ++ +P L L +N++++ E V ++W WPE H+ +G +++WRV PF +TFPA D + W+ +TC+ CP ++L+SL P +RTAL S+LGP+T L+AH GW DLANHVLRVH LV P L PNG C V GE H ER+FIVFDDSK+H AFN HP E+R+VLI+D RP + G A GGH++ELD+FI F
Sbjct: 372 PNYYP-YQELFPQLDTLKDNYNVILEEMQAVQQMATWPFWPEKHYTEG--DSEWRVFPFCYTFPAYDASKTTWVSTTCSMCPRTAEILKSL-PNIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPTL-PNGDPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDETRLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 577
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|568023065|gb|ETL97129.1| (hypothetical protein L917_05518 [Phytophthora parasitica] >gi|568053457|gb|ETM50285.1| hypothetical protein L914_05635 [Phytophthora parasitica] >gi|570990408|gb|ETP48364.1| hypothetical protein F442_05871 [Phytophthora parasitica P10297]) HSP 1 Score: 214.927 bits (546), Expect = 5.056e-59 Identity = 106/211 (50.24%), Postives = 142/211 (67.30%), Query Frame = 0
Query: 314 PNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
PNYY ++ +P L L +N++++ E V ++W WPE H+ +G +++WRV PF +TFPA D + W+ +TC+ CP ++L+SL P +RTAL S+LGP+T L+AH GW DLANHVLRVH LV P L PNG C V GE H ER+FIVFDDSK+H AFN HP E+R+VLI+D RP + G A GGH++ELD+FI F
Sbjct: 372 PNYYP-YQELFPQLDTLKDNYNVILEEMQAVQQMATWPFWPEKHYTEG--DSEWRVFPFCYTFPAYDASKTTWVSTTCSMCPRTAEILKSL-PNIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPRL-PNGDPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDETRLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 577
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|566027786|gb|ETI50697.1| (hypothetical protein F443_05827 [Phytophthora parasitica P1569]) HSP 1 Score: 214.927 bits (546), Expect = 5.162e-59 Identity = 106/211 (50.24%), Postives = 142/211 (67.30%), Query Frame = 0
Query: 314 PNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
PNYY ++ +P L L +N++++ E V ++W WPE H+ +G +++WRV PF +TFPA D + W+ +TC+ CP ++L+SL P +RTAL S+LGP+T L+AH GW DLANHVLRVH LV P L PNG C V GE H ER+FIVFDDSK+H AFN HP E+R+VLI+D RP + G A GGH++ELD+FI F
Sbjct: 372 PNYYP-YQELFPQLDTLKDNYNVILEEMQAVQQMATWPFWPEKHYTEG--DSEWRVFPFCYTFPAYDASKTTWVSTTCSMCPRTAEILKSL-PNIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPRL-PNGDPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDETRLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 577
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|570331482|gb|ETO79430.1| (hypothetical protein F444_05875 [Phytophthora parasitica P1976]) HSP 1 Score: 214.927 bits (546), Expect = 5.843e-59 Identity = 106/211 (50.24%), Postives = 142/211 (67.30%), Query Frame = 0
Query: 314 PNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
PNYY ++ +P L L +N++++ E V ++W WPE H+ +G +++WRV PF +TFPA D + W+ +TC+ CP ++L+SL P +RTAL S+LGP+T L+AH GW DLANHVLRVH LV P L PNG C V GE H ER+FIVFDDSK+H AFN HP E+R+VLI+D RP + G A GGH++ELD+FI F
Sbjct: 372 PNYYP-YQELFPQLDTLKDNYNVILEEMQAVQQMATWPFWPEKHYTEG--DSEWRVFPFCYTFPAYDASKTTWVSTTCSMCPRTAEILKSL-PNIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPRL-PNGDPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDETRLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 577
BLAST of EWM22409.1 vs. NCBI_GenBank
Match: gi|1214681675|gb|OWZ00323.1| (hypothetical protein PHMEG_00028513 [Phytophthora megakarya]) HSP 1 Score: 211.46 bits (537), Expect = 6.953e-58 Identity = 104/211 (49.29%), Postives = 141/211 (66.82%), Query Frame = 0
Query: 314 PNYYDDWRRHYPALRLLLENFDILRAEAAGV---SSWTPWPEYHFRDGGVENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPLGPNGVGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAF 521
PNYY ++ +P L LL +N++++ E V ++W WPE H+ +G +++WRV PF +TFPA D + W+ TC+ CP ++L+SL P +RTAL S+LGP+T L+AH GW DLANHVLRVH +V P L P+G C V GE H ERDFIVFDDSK+H A+N HP +R+VLI+D RP + G A GGH++ELD+FI F
Sbjct: 349 PNYYP-YQEFFPQLDLLKDNYNVILEEMLAVQQMATWPFWPEKHYTEG--DSEWRVFPFCYTFPAYDESKTTWVTPTCSMCPRTAELLKSL-PNIRTALFSKLGPNTTLAAHRGWADLANHVLRVHFPVVVPTL-PDGTPCCAMVVGGETTYHSERDFIVFDDSKLHHAYNHHPDATRLVLIIDFYRPDELPRGRARGGHSDELDEFIETF 554 The following BLAST results are available for this feature:
BLAST of EWM22409.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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