EWM22390.1, cds8282 (CDS) Nannochloropsis gaditana

Overview
NameEWM22390.1
Unique Namecds8282
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:331641..334292 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22390.1
Product5 -3 dna helicase
Orig transcript idgnl|cribi|Naga_100067g25.2678.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:331641..334292 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003678DNA helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0016043cellular component organization
GO:0000723telomere maintenance
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase
Homology
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|585102894|gb|EWM22390.1| (5 -3 dna helicase [Nannochloropsis gaditana])

HSP 1 Score: 1827.37 bits (4732), Expect = 0.000e+0
Identity = 883/883 (100.00%), Postives = 883/883 (100.00%), Query Frame = 0
Query:    1 MIIYYVVCIEESGPKIEGAEGLITSTPAAAHVFQEWAGVKEFLATKTRSTFSIRPFSNLEDAQIYVRTLGYRKCASTVVGEENIATATLAAPCEGSMNMSAGWMHSQLDNMCAGINLDALQYNALEEVLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRGALLCDAETQGPGLERGRVAPRRGARQEVLFSNRGLAFQSDAWWDLDMRVIELKKVFRQDDARFIATLNRVRTGHTTAEDFDWLNQEFYHAPLRREQALQESERKSRERPQLKDGGGREEESDQKKRKLAWKTEGEDGHGVSASGGGPASTSLGEAAQASLRQLGSLEMTRPAPACQIAEEPLHLYPVNALVERRNRVMLDRLPTRLEEYEAQDFVWHEDSGVILRRQETAQGYDGRQRRDLELLLGNHLYYKTCLAAERVKLKLGAKILLLKNVDLLGPQKLVNGSVGMVVEWAPEGNPFFDQDTSGVGAGAAGGESEENLREPSPAPHAVETRPPSSENGTDNKRSLHCYKERLVEAWYTANKSRIPVVLFSNGRKKAIFPELFSETIVGVGCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRVGPRAGLRLAQRLSYSNVKVNPTFLLWHNLHKTMVTRRREVLAMLEAEGDSGAVTHAEGLGLKGLHQEAVAVLMDSTKRAETPVALKRAWASLKKTLDQLKPGKNLQRQDVDILHWQMLDWWRPGNARTMEAIYNVRHSL 883
            MIIYYVVCIEESGPKIEGAEGLITSTPAAAHVFQEWAGVKEFLATKTRSTFSIRPFSNLEDAQIYVRTLGYRKCASTVVGEENIATATLAAPCEGSMNMSAGWMHSQLDNMCAGINLDALQYNALEEVLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRGALLCDAETQGPGLERGRVAPRRGARQEVLFSNRGLAFQSDAWWDLDMRVIELKKVFRQDDARFIATLNRVRTGHTTAEDFDWLNQEFYHAPLRREQALQESERKSRERPQLKDGGGREEESDQKKRKLAWKTEGEDGHGVSASGGGPASTSLGEAAQASLRQLGSLEMTRPAPACQIAEEPLHLYPVNALVERRNRVMLDRLPTRLEEYEAQDFVWHEDSGVILRRQETAQGYDGRQRRDLELLLGNHLYYKTCLAAERVKLKLGAKILLLKNVDLLGPQKLVNGSVGMVVEWAPEGNPFFDQDTSGVGAGAAGGESEENLREPSPAPHAVETRPPSSENGTDNKRSLHCYKERLVEAWYTANKSRIPVVLFSNGRKKAIFPELFSETIVGVGCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRVGPRAGLRLAQRLSYSNVKVNPTFLLWHNLHKTMVTRRREVLAMLEAEGDSGAVTHAEGLGLKGLHQEAVAVLMDSTKRAETPVALKRAWASLKKTLDQLKPGKNLQRQDVDILHWQMLDWWRPGNARTMEAIYNVRHSL
Sbjct:    1 MIIYYVVCIEESGPKIEGAEGLITSTPAAAHVFQEWAGVKEFLATKTRSTFSIRPFSNLEDAQIYVRTLGYRKCASTVVGEENIATATLAAPCEGSMNMSAGWMHSQLDNMCAGINLDALQYNALEEVLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRGALLCDAETQGPGLERGRVAPRRGARQEVLFSNRGLAFQSDAWWDLDMRVIELKKVFRQDDARFIATLNRVRTGHTTAEDFDWLNQEFYHAPLRREQALQESERKSRERPQLKDGGGREEESDQKKRKLAWKTEGEDGHGVSASGGGPASTSLGEAAQASLRQLGSLEMTRPAPACQIAEEPLHLYPVNALVERRNRVMLDRLPTRLEEYEAQDFVWHEDSGVILRRQETAQGYDGRQRRDLELLLGNHLYYKTCLAAERVKLKLGAKILLLKNVDLLGPQKLVNGSVGMVVEWAPEGNPFFDQDTSGVGAGAAGGESEENLREPSPAPHAVETRPPSSENGTDNKRSLHCYKERLVEAWYTANKSRIPVVLFSNGRKKAIFPELFSETIVGVGCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRVGPRAGLRLAQRLSYSNVKVNPTFLLWHNLHKTMVTRRREVLAMLEAEGDSGAVTHAEGLGLKGLHQEAVAVLMDSTKRAETPVALKRAWASLKKTLDQLKPGKNLQRQDVDILHWQMLDWWRPGNARTMEAIYNVRHSL 883          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|553187833|ref|XP_005854688.1| (dna helicase aaa atpase, partial [Nannochloropsis gaditana CCMP526] >gi|422294372|gb|EKU21672.1| dna helicase aaa atpase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 331.643 bits (849), Expect = 1.806e-105
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query:  138 SGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDF 294
            SGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDF
Sbjct:    1 SGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDF 157          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|929761247|ref|XP_014155604.1| (hypothetical protein SARC_05992 [Sphaeroforma arctica JP610] >gi|906952035|gb|KNC81702.1| hypothetical protein SARC_05992 [Sphaeroforma arctica JP610])

HSP 1 Score: 153.68 bits (387), Expect = 2.177e-34
Identity = 102/311 (32.80%), Postives = 149/311 (47.91%), Query Frame = 0
Query:  102 GWMHSQLDNMCAGINLDALQYNALEEVLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRA-FSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQ-----------KLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRGALLCDAETQGPGLERGRVAPRRGARQE----VLFSNRGLAFQSDAWWDLDMRVIELKKVFRQ-DDARFIATLNRVRTGHTTAEDFDWLNQEFYHAPL 395
             W   ++ N    + LD  Q   +   ++  +NVFL+GS GVGKS  T  + + L+R + R  +  +V + A TG+A+TH+DGTT+++ATGVG+P     F RM      + + W++  E+  VDEISM+SGE LD L+  I+           K      PFGG+Q+ F GDF QLPP+                   EG   F  M  +    L      +G  +E+      +  +QE      F NRG AF +  W  LD+  I L K +RQ     F+  LN++R G       D+ NQ  +  PL
Sbjct:  576 NWYQERIRND-PSLTLDEDQLRCVRLTIVDEKNVFLTGSAGVGKSHTTATVRDFLKRLYEREDYPDRVVVAAPTGVAATHIDGTTINSATGVGIPSEVADFQRMM--KPAMYKLWTQDVELFMVDEISMVSGEFLDCLDSQIRLMCMNLPKNMGKKLHELPPFGGIQIFFCGDFLQLPPI-------------------EGSIPFETMKKLDPQQL-----KRGLAIEK-----YKNEKQEWTERSYFLNRGFAFSASTWGRLDLVTITLSKCYRQLGQQLFVHHLNQIRNGRADQRTLDYFNQ--FRTPL 852          

HSP 2 Score: 116.701 bits (291), Expect = 7.743e-23
Identity = 103/315 (32.70%), Postives = 152/315 (48.25%), Query Frame = 0
Query:  484 PLHLYPVNALVERRNRVMLDRLPTRLEEYEAQDFVWHEDSGVILRRQETAQGYDGRQRRDLELLLGNHLYYKTCLAAERVKLKLGAKILLLKNVDLLGPQKL---VNGSVGMVVEWAPEGNPFFDQDTSGVGAGAAGGESEENLREPSPAPHAV----ETRPPSSENGTDNKRSLHCYKE--RLVEAWYTANKSRIPVVLFSNGRKKAIFPELFSETIVGVGCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRV-GPRAGLRLAQRLSYSNVKVNPTFLLWHNL--HKTMVTRRREVLA 786
            P  L+P N  V++ N   L  L ++   + A D V    +G+     ETA             L  + L+    LA   ++LK  A++LL++N+DL G  KL   +NGS G+V  W           TS V A          L     A H+     E    S      ++R+     E  ++V A Y   K ++PVV F+NGR+  I P LF   ++G G T RLQ+PL +G+A+SIHKSQGMTL    V     F  GQ+YVALSRV GP A L +   L+  ++K+    ++++ +     M++R+  VL 
Sbjct:  858 PTTLFPFNKKVQQLNSTKLASLCSQAMTFHAHDHV----NGLNNCHDETA-------------LWESELFKGGSLAERALQLKTNARVLLIRNLDLKGTDKLKPLINGSSGVVTNW-----------TSKVEAEQTVQHRMNYLSTRVEALHSALGHGEYSRGSRACEISDERACEVEHELLQIVAAKY---KWKLPVVEFNNGRQMIILPCLFRNEVMGQGMTYRLQIPLKLGWAVSIHKSQGMTLTAGNVSTAGAFAEGQSYVALSRVTGPEA-LYMIDMLTMKDIKMPRQPVIYNQIMAQLDMLSRKLCVLT 1140          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|909602297|gb|KNE92746.1| (hypothetical protein PSTG_13877 [Puccinia striiformis f. sp. tritici PST-78])

HSP 1 Score: 143.665 bits (361), Expect = 2.925e-31
Identity = 90/260 (34.62%), Postives = 133/260 (51.15%), Query Frame = 0
Query:  133 RNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHF-----------GRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRGALLCDAETQGPGLERGRVAPRRGARQEVLFSNRGLAFQSDAWWDLDMRVIELKKVFRQDDARFIATLNRVRTGHTTAE 381
            RNVF +GS GVGKSF+ + ++ +L+        R+V +TA TGIA+  + G+T+H+   VG+ +   H            G+ F  D    R W  + +VL VDEISML  ++ + ++ + Q +R+SKEPFGG+Q++  GDF QLPPV +D S+T                 +   P   R     D     P  ++    P    R+E  F      F++  W  L ++VIEL KVFRQ+D  FI  LN++R G    E
Sbjct:  157 RNVFFTGSAGVGKSFMLHEVVRMLKSDR-----RRVSVTAPTGIAALAIGGSTIHSWAKVGLGQGSVHTLYNKLLQNKLKGKKFNNDSDDNRIW--NTDVLIVDEISMLHPDLFEKVSILCQAIRQSKEPFGGIQIILSGDFFQLPPVAKDDSFTCM---------------YCGCPKFERIGSTGDIRCVRPLHKQWDEKPCGRVRKEYTF-----CFETPTWLQLKLQVIELTKVFRQEDKHFIDMLNKIRWGTVDDE 389          

HSP 2 Score: 87.4261 bits (215), Expect = 8.278e-14
Identity = 72/224 (32.14%), Postives = 111/224 (49.55%), Query Frame = 0
Query:  561 ERVKLKLGAKILLLKNVDLLGPQKLVNGSVGMVVEWAPEGNPFFDQDTSGVGAGAAGGESEENLREPSPAPHAVETRPPSSENGTDNKRSLHCYKERLVEAWYTANKSRIPVVLFSNGRKKAIFPELFSETIVGVGCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRVGPRAGLRLAQRLSYSNVKVNPTFL-LWHNLHKTMVTRRRE 783
            +++ LK+GA+++LL N+D+    KLVNGS G+V++W                +G+    +  + R+P                    K+ L C ++        ANK  +P VLFS+GR   I P ++   I      CR QLPL + +AI+IHKSQG +L    VD+   F+ GQ YVALSR     GL++    S S V+ +P+    + +LH+     RR+
Sbjct:  463 KKLPLKIGAQVMLLCNLDIKA--KLVNGSRGVVIDWVER-------------SGSHLPTTLTHQRDPDAM-----------------KKMLWCSRQ--------ANK-LLPKVLFSDGRIMLIEPFVWEVEIDKQLTLCRTQLPLSLAWAITIHKSQGQSLDRLCVDLFGIFEHGQAYVALSRARSLEGLQITGWKS-SRVQCHPSVKDFYKSLHEEKPYDRRK 644          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|50546699|ref|XP_500819.1| (YALI0B12892p [Yarrowia lipolytica CLIB122] >gi|49646685|emb|CAG83070.1| YALI0B12892p [Yarrowia lipolytica CLIB122] >gi|1078654506|gb|AOW01621.1| hypothetical protein YALI1_B17050g [Yarrowia lipolytica] >gi|1093604851|emb|SEI30931.1| YALIA101S01e10946g1_1 [Yarrowia lipolytica])

HSP 1 Score: 142.51 bits (358), Expect = 6.937e-31
Identity = 91/243 (37.45%), Postives = 129/243 (53.09%), Query Frame = 0
Query:  134 NVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPR-CWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRGALLCDAETQGPGLERGRVAPRRGARQEVLFSNRGLAFQSDAWWDLDMRVIELKKVFRQDDARFIATLNRVRT 375
            N+F +G+ G GKS +   II  LRR + ++   KV +TASTG+A+ +V GTTLH+  G G+ R   D   +   ++K    RW ++  VL +DEISM+     D L +I QKLRR+K PFGG+Q++  GDF QLPPVP+    T  D  R    ++ G++    M V SR A+  D                     E LF     AF++++W  +      L KVFRQ D  F   LN++RT
Sbjct:  549 NIFFTGAAGTGKSVLLRQIIASLRRKYKKSLD-KVAVTASTGLAACNVQGTTLHSFAGCGLAREDVDSLCKRIRRNKKARDRW-KNVSVLVIDEISMVDARFFDKLEQIAQKLRRNKRPFGGIQLIVTGDFYQLPPVPD----TNKDRFR---GSYGGNKTNTGM-VDSRSAVNSDP--------------------EALF-----AFEAESWSTVIDSTFLLTKVFRQKDPVFANMLNQLRT 756          

HSP 2 Score: 91.2781 bits (225), Expect = 5.550e-15
Identity = 110/370 (29.73%), Postives = 158/370 (42.70%), Query Frame = 0
Query:  460 QASLRQLGSLEMTRP--APACQIAEEPLHLYPVNALVERRNRVMLDRLPTRLEEYEAQDFVWHEDSGVILRRQETAQGYDGRQRRDLELLLGNHLYYKTCLAAERVKLKLGAKILLLKNVDLLGPQKLVNGSVGMVVEW--------------------APEGNP-FFDQDT------------SGVGAGAAGGESEENLREPSPAP-------HAVETRPPSSENGTDNKRSLHCYK--ERLVEAWYTA-NKSRIPVVLF----SNGRKKAIFPELFS-ETIVGVGCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRVGPRAGLRLAQRLSYSNVKVNPTFLLWHNLHKTMVT 779
            QASL   G L ++RP   P   I   P  L+P    V+R N   L  L  +   ++A +                  G   R+ RD   LL N       +  +++ LK GA++++LKN+D      LVNGS+G+VV +                     P   P  +D               +G   G +   SEE+    SPA          ++  P  ++N T  KR L   K  E L +    A N +  PVV F       R   + PE FS E I G     R Q+PL++ +A+SIHK+QG TLQ   VD+ + F+ GQ YVALSR   + GL++   L    VK +P  +     +KT+ T
Sbjct:  761 QASLD--GFLSLSRPLSVPDGII---PTELFPTRREVDRSNFSKLSTLGGKTHTFDALE-----------------TGSAEREFRDK--LLEN------IMVPKKLTLKAGAQVMMLKNMD----PNLVNGSIGVVVGFMSPHNFIAAENAADLDIIREKPSKRPNIYDVSNESELNQLNQLIETGKVVGESSQASEESAFFSSPAQGDSDCVFERLKAFPEDADNATFLKRKLERRKQLEDLAKTNLAAMNGAVYPVVRFRRMDHTFRNVLLHPETFSVENIEGEVLASRTQIPLILAWALSIHKAQGQTLQYVKVDLAKTFERGQAYVALSRATSKEGLQVLNFLP-EKVKTHPKVV---EFYKTLTT 1092          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|936527622|emb|CDO54726.1| (similar to Saccharomyces cerevisiae YML061C PIF1 DNA helicase [Geotrichum candidum])

HSP 1 Score: 138.658 bits (348), Expect = 9.954e-30
Identity = 99/322 (30.75%), Postives = 152/322 (47.20%), Query Frame = 0
Query:   65 YVRTLGYRKCASTVVGEENIATATLAAPCEGSMNMSAGWMHSQLDNMCAGINLDALQYNALEEVLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGV-PRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRG----ALLCDAETQGPGLERGRVAPRRGARQEVLFSNRGLAFQSDAWWDLDMRVIELKKVFRQDDARFIATLNRVRTGHTTAE 381
            ++  L ++  AST+  ++    A  AA    S   S    +S +    A I L   Q   L  V+  RRN+F +G+ G GKS +   II  LR+ H +   + V +TASTG+A+ ++ G TLH+  G+G+             +++   +RW +  +VL +DEISM+ GE+ + L  I + +RR+  PFGG+Q+V  GDF QLPPV          F +R +     ++    M   + G     ++ + E +G                         AF SD W  +    +ELK+VFRQ D RF   LN +R G  T E
Sbjct:  260 FISPLVHKAHASTLAADQATTEAAKAAAVSTSNAQSKNKGNSAI----APIFLSEEQRKVLSMVVDERRNIFFTGAAGTGKSVLLRRIIVELRKKHKKLGPQVVSVTASTGLAACNIGGMTLHSFAGIGLGEETVSQLVDKIRRNRKANQRW-KTTKVLIIDEISMIDGELFEKLEEIARIIRRNPGPFGGIQIVLTGDFYQLPPV----------FKKRNE-----NDGLAAMTTRNGGFKLDEMINEDEPEG-----------------------KFAFDSDCWNTVIETTVELKQVFRQRDDRFSGMLNSLREGAVTDE 538          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|926780036|ref|XP_013898492.1| (ATP-dependent DNA helicase PIF1 [Monoraphidium neglectum] >gi|761968190|gb|KIY99472.1| ATP-dependent DNA helicase PIF1 [Monoraphidium neglectum])

HSP 1 Score: 130.183 bits (326), Expect = 2.298e-29
Identity = 66/142 (46.48%), Postives = 95/142 (66.90%), Query Frame = 0
Query:  128 VLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPV 269
            VL  R+NVF +G+ G GKSF+ + I+  LR   G  FS +V +TA+TGIA+TH+ G TLH+A G G+   +  +GRMF + K  +R   R  + L +DEISM+S E L+ L   ++ LR +  P+GGL++VF GDF+QLPP+
Sbjct:  166 VLQDRQNVFFTGNAGTGKSFLLSHIVGQLRSEFGLLFSTRVAVTAATGIAATHIAGQTLHSAMGCGLINSYRDWGRMF-ERKNAQR--IRDLDTLVLDEISMVSAEFLNELEATLRALRNNARPWGGLRLVFCGDFSQLPPI 304          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|818902842|gb|KKW36682.1| (AAA ATPase [Candidatus Uhrbacteria bacterium GW2011_GWC2_53_7])

HSP 1 Score: 126.716 bits (317), Expect = 2.234e-27
Identity = 66/144 (45.83%), Postives = 93/144 (64.58%), Query Frame = 0
Query:  134 NVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPR---CWD--HFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPED 272
            NVFL+G  G GK+FVTN  ++ L+R        +V +TASTGIA+TH+ G T+H+ +G+G+ +    WD        Y  K ++R       +L +DEISML G  L ++ R+ ++++RSKEPFGGLQVVFVGDF QLPPV  +
Sbjct:   15 NVFLTGEPGSGKTFVTNAYVSFLKRAK-----IEVAVTASTGIAATHIGGRTIHSWSGIGIKKELTSWDVDRIASNEYAAKRIDR-----TRILIIDEISMLDGRTLSSIERVCREVKRSKEPFGGLQVVFVGDFFQLPPVARE 148          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|906319943|emb|CEP20552.1| (PIF1 [Cyberlindnera jadinii])

HSP 1 Score: 128.257 bits (321), Expect = 8.763e-27
Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 0
Query:  110 NMCAGINLDALQYNALEEVLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGV-PRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWH 296
            ++ + + L   Q   LE V+ +  NVF +GS G GKS +   II+ L   HG   SR V + ASTG+A+ ++ G+T++  +G+G+  R    +  M  +   V+ RW R  +VL +DEISML G  LD LN++ Q +R  KEPFGG+Q+V  GDF QLPPVP D +       + Q W +       H
Sbjct:  225 SITSDLKLSDEQKLVLELVVRKGLNVFYTGSAGTGKSLLLREIISALNLKHG---SRAVAVAASTGLAAVNIGGSTINRLSGMGIGDRTPQAYISMIRKKPEVKERW-RLMKVLIIDEISMLDGSFLDKLNQVAQGVRNYKEPFGGVQLVLTGDFFQLPPVP-DKNRAMKFCFQAQSWKYINRTILLH 407          

HSP 2 Score: 90.1225 bits (222), Expect = 9.024e-15
Identity = 83/294 (28.23%), Postives = 127/294 (43.20%), Query Frame = 0
Query:  483 EPLHLYPVNALVERRNRVMLDRLPTRLEEYEAQDFVWHEDSGVILRRQETAQGYDGRQRRDLELLLGNHLYYKTCLAAERVKLKLGAKILLLKNVDLLGPQKLVNGSVGMV-----VEWAPEGNPFFDQDTSGVGAGAAGGESEENLREPSPAPHAVETRPPSSENGTDNKRSLHCYKERLVEAWYTANKSRIPVVLFSNGRKKAIF---PELFSETIVGV---GCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRVGPRAGLRLAQRLSYSNVKVNP 765
            +P  LY     VE  NR  L  LP R++++ A D                    D R  + LE            +A + ++LK+GA++++LKN+D    + LVNGSVG+V      E   E    F   +     G  G +  + ++E +   H  E      E  +  K+     K+    +      +  PVV F       IF   P+ F  +  G        R Q+PL++ +A+SIHK+QG TL    VD+ R F+ GQ YVALSR   +  L++        ++VNP
Sbjct:  451 QPTELYSTRNEVEYSNRKRLAALPGRVKKFTANDI-----------------APDDRAAKMLE----------NTMAVKELELKIGAQVMMLKNID----ETLVNGSVGVVWGYLSSEQYTELRTAFLLSSDDPLDGNEGKKIIDLIQECNAEGHITEEAKTYIEQISSMKKRQSAVKKAAEFSSSVTEAALFPVVRFKTPAGGRIFLAEPDEFQVSERGDDSHSVIARKQVPLLLSWALSIHKAQGQTLNYVRVDLNRVFEAGQVYVALSRAVSKENLQILN-FHPDKIRVNP 712          
BLAST of EWM22390.1 vs. NCBI_GenBank
Match: gi|1152459745|ref|WP_078316849.1| (helicase [Moraxella porci] >gi|1151619770|gb|OOS26459.1| helicase [Moraxella porci DSM 25326])

HSP 1 Score: 127.487 bits (319), Expect = 8.784e-27
Identity = 63/146 (43.15%), Postives = 99/146 (67.81%), Query Frame = 0
Query:  128 VLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWD--HFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPE 271
            +L   +NVFL+G  G GK++V N  I+ LR     A +  V +TASTGIASTH++GTT+HA +G+G+    D  +  ++  +D+ ++R   ++ +VL +DEISML  + +D +N +++  R+S+ PFGG+QV+F GDF QLPP+ E
Sbjct:    9 ILKTGQNVFLTGQAGAGKTYVLNQYIDYLR-----ARNIAVAVTASTGIASTHMNGTTIHAWSGIGIQNSIDKVNLQKLAMRDEYLDR--IKNTKVLIIDEISMLHAKQVDTINAVMKHFRKSELPFGGVQVIFSGDFFQLPPIGE 147          
The following BLAST results are available for this feature:
BLAST of EWM22390.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102894|gb|EWM22390.1|0.000e+0100.005 -3 dna helicase [Nannochloropsis gaditana][more]
gi|553187833|ref|XP_005854688.1|1.806e-105100.00dna helicase aaa atpase, partial [Nannochloropsis ... [more]
gi|929761247|ref|XP_014155604.1|2.177e-3432.80hypothetical protein SARC_05992 [Sphaeroforma arct... [more]
gi|909602297|gb|KNE92746.1|2.925e-3134.62hypothetical protein PSTG_13877 [Puccinia striifor... [more]
gi|50546699|ref|XP_500819.1|6.937e-3137.45YALI0B12892p [Yarrowia lipolytica CLIB122] >gi|496... [more]
gi|936527622|emb|CDO54726.1|9.954e-3030.75similar to Saccharomyces cerevisiae YML061C PIF1 D... [more]
gi|926780036|ref|XP_013898492.1|2.298e-2946.48ATP-dependent DNA helicase PIF1 [Monoraphidium neg... [more]
gi|818902842|gb|KKW36682.1|2.234e-2745.83AAA ATPase [Candidatus Uhrbacteria bacterium GW201... [more]
gi|906319943|emb|CEP20552.1|8.763e-2738.83PIF1 [Cyberlindnera jadinii][more]
gi|1152459745|ref|WP_078316849.1|8.784e-2743.15helicase [Moraxella porci] >gi|1151619770|gb|OOS26... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8306rna8306Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications