EWM22400.1, cds8280 (CDS) Nannochloropsis gaditana

Overview
NameEWM22400.1
Unique Namecds8280
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:326764..327333 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22400.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100067g22.2688.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:326764..327333 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|585102904|gb|EWM22400.1| (hypothetical protein Naga_100067g22 [Nannochloropsis gaditana])

HSP 1 Score: 390.193 bits (1001), Expect = 2.347e-137
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query:    1 MRVLAWTNAALNVALSVELRSGSSPSRIFPTGALGYVTRPSCLEGLVMSTEGGSSGTNDDGRRRASFSSAEHLPASSITTSAHGMEDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            MRVLAWTNAALNVALSVELRSGSSPSRIFPTGALGYVTRPSCLEGLVMSTEGGSSGTNDDGRRRASFSSAEHLPASSITTSAHGMEDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR
Sbjct:    1 MRVLAWTNAALNVALSVELRSGSSPSRIFPTGALGYVTRPSCLEGLVMSTEGGSSGTNDDGRRRASFSSAEHLPASSITTSAHGMEDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|553187829|ref|XP_005854687.1| (hypothetical protein NGA_2002700, partial [Nannochloropsis gaditana CCMP526] >gi|422294371|gb|EKU21671.1| hypothetical protein NGA_2002700, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 176.792 bits (447), Expect = 1.724e-54
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query:   86 EDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVV 171
            EDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVV
Sbjct:    1 EDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVV 86          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|223999171|ref|XP_002289258.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974466|gb|EED92795.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 105.531 bits (262), Expect = 9.727e-25
Identity = 46/70 (65.71%), Postives = 52/70 (74.29%), Query Frame = 0
Query:  120 KREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            +RE R       K C ICN+  +LLIRC  DSS EW MVCGKCW ++SGGVVDGDAAHP+YRYGGLWK R
Sbjct:  156 QREGRGDPTAGQKQCTICNKSVNLLIRCTYDSSEEWGMVCGKCWNDISGGVVDGDAAHPYYRYGGLWKNR 225          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|1129207813|gb|OLQ09640.1| (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [Symbiodinium microadriaticum])

HSP 1 Score: 108.997 bits (271), Expect = 1.881e-24
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0
Query:  109 KKMRKKAAKAAKREKR-----ESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            ++ RKKA KA +R +R     E +    KPC +C R  DLL+RC++D S +W M+CG+CW++ SGGV DGDA+HPHYRYGGLWK R
Sbjct:  311 RRERKKALKAERRARRAQSPEERSAAKRKPCTLCQRPVDLLVRCRIDISQKWHMLCGRCWKKASGGVPDGDASHPHYRYGGLWKNR 396          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|1199292154|gb|OUS47242.1| (hypothetical protein BE221DRAFT_204464 [Ostreococcus tauri])

HSP 1 Score: 102.449 bits (254), Expect = 2.935e-23
Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  105 EKEMKKMRKKAAKAAKREKRESN---KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            E+   K + KA KA +R + E N       KPC  C +  + LIRCQ D++  W+MVCGKCW +VSGGVVDGDA HPHYRYGGLWK R
Sbjct:  160 ERAKHKAKVKAQKAERRARLEFNGDPTSGQKPCDECEKMVNELIRCQTDATKRWRMVCGKCWVQVSGGVVDGDAEHPHYRYGGLWKNR 247          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|308806377|ref|XP_003080500.1| (unnamed protein product [Ostreococcus tauri])

HSP 1 Score: 102.449 bits (254), Expect = 2.966e-23
Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  105 EKEMKKMRKKAAKAAKREKRESN---KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            E+   K + KA KA +R + E N       KPC  C +  + LIRCQ D++  W+MVCGKCW +VSGGVVDGDA HPHYRYGGLWK R
Sbjct:  160 ERAKHKAKVKAQKAERRARLEFNGDPTSGQKPCDECEKMVNELIRCQTDATKRWRMVCGKCWVQVSGGVVDGDAEHPHYRYGGLWKNR 247          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|1210520722|dbj|GAX20478.1| (hypothetical protein FisN_22Hu046 [Fistulifera solaris])

HSP 1 Score: 101.293 bits (251), Expect = 3.067e-23
Identity = 46/71 (64.79%), Postives = 52/71 (73.24%), Query Frame = 0
Query:  120 KREKRESN-KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            +R KRE       K C +C +  +LLIRC +D+S EWKMVCGKCW  VSGGVVDGDA HPHYRYGGLWK R
Sbjct:  149 RRAKREGKADCGQKSCDVCQKSVNLLIRCTIDASGEWKMVCGKCWHSVSGGVVDGDANHPHYRYGGLWKNR 219          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|693499313|emb|CEF98851.1| (Uncharacterised conserved protein UCP037205 [Ostreococcus tauri])

HSP 1 Score: 100.138 bits (248), Expect = 3.348e-23
Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  105 EKEMKKMRKKAAKAAKREKRESN---KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            E+   K + KA KA +R + E N       KPC  C +  + LIRCQ D++  W+MVCGKCW +VSGGVVDGDA HPHYRYGGLWK R
Sbjct:   73 ERAKHKAKVKAQKAERRARLEFNGDPTSGQKPCDECEKMVNELIRCQTDATKRWRMVCGKCWVQVSGGVVDGDAEHPHYRYGGLWKNR 160          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|219119159|ref|XP_002180346.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408603|gb|EEC48537.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 98.5969 bits (244), Expect = 2.261e-22
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
Query:  120 KREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            +R+ R       K C  C++  DLLIRC VD+S +W+MVCG+CW+ VSGGVVDGDA HPHYRYGGLWK R
Sbjct:  134 QRQGRADPSYGRKECTQCHQSVDLLIRCVVDASGDWEMVCGRCWKSVSGGVVDGDADHPHYRYGGLWKNR 203          
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|397630538|gb|EJK69807.1| (hypothetical protein THAOC_08899 [Thalassiosira oceanica])

HSP 1 Score: 102.449 bits (254), Expect = 5.902e-22
Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 0
Query:  120 KREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
            +RE R       K C IC +  DLLIRCQ+D S  W M CGKCW +VSGGVVDGD +HPHYRYGGLWK R
Sbjct:  616 QREGRGDPSSGQKQCTICGKSVDLLIRCQIDESQTWHMSCGKCWNDVSGGVVDGDDSHPHYRYGGLWKNR 685          
The following BLAST results are available for this feature:
BLAST of EWM22400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102904|gb|EWM22400.1|2.347e-137100.00hypothetical protein Naga_100067g22 [Nannochlorops... [more]
gi|553187829|ref|XP_005854687.1|1.724e-54100.00hypothetical protein NGA_2002700, partial [Nannoch... [more]
gi|223999171|ref|XP_002289258.1|9.727e-2565.71predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1129207813|gb|OLQ09640.1|1.881e-2454.65Ubiquinone/menaquinone biosynthesis C-methyltransf... [more]
gi|1199292154|gb|OUS47242.1|2.935e-2355.68hypothetical protein BE221DRAFT_204464 [Ostreococc... [more]
gi|308806377|ref|XP_003080500.1|2.966e-2355.68unnamed protein product [Ostreococcus tauri][more]
gi|1210520722|dbj|GAX20478.1|3.067e-2364.79hypothetical protein FisN_22Hu046 [Fistulifera sol... [more]
gi|693499313|emb|CEF98851.1|3.348e-2355.68Uncharacterised conserved protein UCP037205 [Ostre... [more]
gi|219119159|ref|XP_002180346.1|2.261e-2261.43predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397630538|gb|EJK69807.1|5.902e-2262.86hypothetical protein THAOC_08899 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8304rna8304Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications