EWM22400.1, cds8280 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|585102904|gb|EWM22400.1| (hypothetical protein Naga_100067g22 [Nannochloropsis gaditana]) HSP 1 Score: 390.193 bits (1001), Expect = 2.347e-137 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query: 1 MRVLAWTNAALNVALSVELRSGSSPSRIFPTGALGYVTRPSCLEGLVMSTEGGSSGTNDDGRRRASFSSAEHLPASSITTSAHGMEDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
MRVLAWTNAALNVALSVELRSGSSPSRIFPTGALGYVTRPSCLEGLVMSTEGGSSGTNDDGRRRASFSSAEHLPASSITTSAHGMEDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR
Sbjct: 1 MRVLAWTNAALNVALSVELRSGSSPSRIFPTGALGYVTRPSCLEGLVMSTEGGSSGTNDDGRRRASFSSAEHLPASSITTSAHGMEDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|553187829|ref|XP_005854687.1| (hypothetical protein NGA_2002700, partial [Nannochloropsis gaditana CCMP526] >gi|422294371|gb|EKU21671.1| hypothetical protein NGA_2002700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 176.792 bits (447), Expect = 1.724e-54 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 86 EDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVV 171
EDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVV
Sbjct: 1 EDQHKPAEEKGALPPPVVPEKEMKKMRKKAAKAAKREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVV 86
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|223999171|ref|XP_002289258.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974466|gb|EED92795.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 105.531 bits (262), Expect = 9.727e-25 Identity = 46/70 (65.71%), Postives = 52/70 (74.29%), Query Frame = 0
Query: 120 KREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
+RE R K C ICN+ +LLIRC DSS EW MVCGKCW ++SGGVVDGDAAHP+YRYGGLWK R
Sbjct: 156 QREGRGDPTAGQKQCTICNKSVNLLIRCTYDSSEEWGMVCGKCWNDISGGVVDGDAAHPYYRYGGLWKNR 225
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|1129207813|gb|OLQ09640.1| (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [Symbiodinium microadriaticum]) HSP 1 Score: 108.997 bits (271), Expect = 1.881e-24 Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0
Query: 109 KKMRKKAAKAAKREKR-----ESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
++ RKKA KA +R +R E + KPC +C R DLL+RC++D S +W M+CG+CW++ SGGV DGDA+HPHYRYGGLWK R
Sbjct: 311 RRERKKALKAERRARRAQSPEERSAAKRKPCTLCQRPVDLLVRCRIDISQKWHMLCGRCWKKASGGVPDGDASHPHYRYGGLWKNR 396
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|1199292154|gb|OUS47242.1| (hypothetical protein BE221DRAFT_204464 [Ostreococcus tauri]) HSP 1 Score: 102.449 bits (254), Expect = 2.935e-23 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 0
Query: 105 EKEMKKMRKKAAKAAKREKRESN---KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
E+ K + KA KA +R + E N KPC C + + LIRCQ D++ W+MVCGKCW +VSGGVVDGDA HPHYRYGGLWK R
Sbjct: 160 ERAKHKAKVKAQKAERRARLEFNGDPTSGQKPCDECEKMVNELIRCQTDATKRWRMVCGKCWVQVSGGVVDGDAEHPHYRYGGLWKNR 247
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|308806377|ref|XP_003080500.1| (unnamed protein product [Ostreococcus tauri]) HSP 1 Score: 102.449 bits (254), Expect = 2.966e-23 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 0
Query: 105 EKEMKKMRKKAAKAAKREKRESN---KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
E+ K + KA KA +R + E N KPC C + + LIRCQ D++ W+MVCGKCW +VSGGVVDGDA HPHYRYGGLWK R
Sbjct: 160 ERAKHKAKVKAQKAERRARLEFNGDPTSGQKPCDECEKMVNELIRCQTDATKRWRMVCGKCWVQVSGGVVDGDAEHPHYRYGGLWKNR 247
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|1210520722|dbj|GAX20478.1| (hypothetical protein FisN_22Hu046 [Fistulifera solaris]) HSP 1 Score: 101.293 bits (251), Expect = 3.067e-23 Identity = 46/71 (64.79%), Postives = 52/71 (73.24%), Query Frame = 0
Query: 120 KREKRESN-KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
+R KRE K C +C + +LLIRC +D+S EWKMVCGKCW VSGGVVDGDA HPHYRYGGLWK R
Sbjct: 149 RRAKREGKADCGQKSCDVCQKSVNLLIRCTIDASGEWKMVCGKCWHSVSGGVVDGDANHPHYRYGGLWKNR 219
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|693499313|emb|CEF98851.1| (Uncharacterised conserved protein UCP037205 [Ostreococcus tauri]) HSP 1 Score: 100.138 bits (248), Expect = 3.348e-23 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 0
Query: 105 EKEMKKMRKKAAKAAKREKRESN---KLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
E+ K + KA KA +R + E N KPC C + + LIRCQ D++ W+MVCGKCW +VSGGVVDGDA HPHYRYGGLWK R
Sbjct: 73 ERAKHKAKVKAQKAERRARLEFNGDPTSGQKPCDECEKMVNELIRCQTDATKRWRMVCGKCWVQVSGGVVDGDAEHPHYRYGGLWKNR 160
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|219119159|ref|XP_002180346.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408603|gb|EEC48537.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 98.5969 bits (244), Expect = 2.261e-22 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
Query: 120 KREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
+R+ R K C C++ DLLIRC VD+S +W+MVCG+CW+ VSGGVVDGDA HPHYRYGGLWK R
Sbjct: 134 QRQGRADPSYGRKECTQCHQSVDLLIRCVVDASGDWEMVCGRCWKSVSGGVVDGDADHPHYRYGGLWKNR 203
BLAST of EWM22400.1 vs. NCBI_GenBank
Match: gi|397630538|gb|EJK69807.1| (hypothetical protein THAOC_08899 [Thalassiosira oceanica]) HSP 1 Score: 102.449 bits (254), Expect = 5.902e-22 Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 0
Query: 120 KREKRESNKLSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
+RE R K C IC + DLLIRCQ+D S W M CGKCW +VSGGVVDGD +HPHYRYGGLWK R
Sbjct: 616 QREGRGDPSSGQKQCTICGKSVDLLIRCQIDESQTWHMSCGKCWNDVSGGVVDGDDSHPHYRYGGLWKNR 685 The following BLAST results are available for this feature:
BLAST of EWM22400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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