EWM22411.1, cds8272 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|585102915|gb|EWM22411.1| (4-phosphopantetheinyl transferase entd [Nannochloropsis gaditana]) HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
Query: 1 MTPALRRPPPTLSVIVLLLHMGLISMVKARGSWSRSLTARVEVKEAFRDQNAAFVDCHSRVRLSRPTRQPGASSYYFTSVTSKSMYPSTVPPCSICLNTVVSTSRASDICFDGRLTAEQLFPTSFELDMPPMGHVLALRLPVSSVSQDPDREWDLSILLDSSTMDTVSRSAAKFPTLLHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDNGRFFLTAVWVRKVEIRS 388
MTPALRRPPPTLSVIVLLLHMGLISMVKARGSWSRSLTARVEVKEAFRDQNAAFVDCHSRVRLSRPTRQPGASSYYFTSVTSKSMYPSTVPPCSICLNTVVSTSRASDICFDGRLTAEQLFPTSFELDMPPMGHVLALRLPVSSVSQDPDREWDLSILLDSSTMDTVSRSAAKFPTLLHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDNGRFFLTAVWVRKVEIRS
Sbjct: 1 MTPALRRPPPTLSVIVLLLHMGLISMVKARGSWSRSLTARVEVKEAFRDQNAAFVDCHSRVRLSRPTRQPGASSYYFTSVTSKSMYPSTVPPCSICLNTVVSTSRASDICFDGRLTAEQLFPTSFELDMPPMGHVLALRLPVSSVSQDPDREWDLSILLDSSTMDTVSRSAAKFPTLLHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDNGRFFLTAVWVRKVEIRS 388
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|1072224633|gb|OEU09382.1| (hypothetical protein FRACYDRAFT_271324 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 134.42 bits (337), Expect = 5.353e-34 Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 0
Query: 193 DSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVE-----EDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDNGRFFLTA 378
+S+ +F GRLA+R +L PI L+D+ G P + V SISHK++ + L+ E D N L+ +G+D+E+ RP ++++ RVLT E+ LG + GI+ + E+LLRFSLKE++YKA +P L +YV FQEAEVTP DGT++ + L A + + + HW++V +G+FFLT+
Sbjct: 6 NSKNSFWLGRLAIRIALNFPDYPI------LKDQYGRPLMIQGVYGSISHKEERGVALISLPEPVIDASDSNVRLAGVGIDLEMTS-RPGRSNVSKRVLTINERQSLGNIP--GITIDEEVLLRFSLKEAIYKAAHPLLCQYVGFQEAEVTPFADGTASCIWLLDTKADKRIVKLTAHWKKVVDGQFFLTS 187
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|1210520791|dbj|GAX20354.1| (hypothetical protein FisN_9Hh064 [Fistulifera solaris]) HSP 1 Score: 126.331 bits (316), Expect = 3.255e-30 Identity = 77/213 (36.15%), Postives = 122/213 (57.28%), Query Frame = 0
Query: 174 FPTLLHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDNGRFFLTAVWVRKVEI 386
PT+LHP EL+ + + +R +F GRLALR Q + ++ +L+D G P LP+ ASISHK + + LL++ + +IGVD+E P+ +A +VLT EQ+ LG + + ++ E E+LLRFS+KES+YKA++P+L YV FQ+ EV P DG + L A L + + +W+++ G +FL++ V V +
Sbjct: 71 IPTVLHPLELEYGRQLPSFKTRNSFFLGRLALR-------QVLDTKEPILKDAYGRPRLPAGYVASISHKGPVGVALLQA------SMMGSIGVDLEYSHGNPN---VARKVLTPHEQESLGQIPT--VTPEEEVLLRFSMKESLYKAMHPYLCHYVGFQQVEVQPTADGRGHVQLLFPN--ATRLSDVQIYWQRM--GPYFLSSCRVLPVSV 261
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|397575909|gb|EJK49959.1| (hypothetical protein THAOC_31114 [Thalassiosira oceanica]) HSP 1 Score: 119.013 bits (297), Expect = 4.666e-26 Identity = 92/261 (35.25%), Postives = 125/261 (47.89%), Query Frame = 0
Query: 155 LSILLDSSTMDTVSRSAAKFPTLLHPKELDLAM-NMSNLDSRLAFLGGRLALRRSLRKL--------PQPIRIEQAVL-----RDEKGAPALPSHVQASISHKQDLAI--------------------CLLRSVEE---------DPNRALSNIGVDIE-ICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDN 371
L + L ST+ +++ LLHP E N + +SR ++ GR ALR SL L P+ R+ AV +D G P LP V SISHK D A+ C + E+ + NR IG+D+E I R S I +VLT E LGGL S+GIS E++LRFSLKES YKA++P + YV+F+EAE+TP DG + + L LK G ++ A WR D+
Sbjct: 112 LCVGLCKSTLGSLTSPHDDGMQLLHPDEYMWGQANFKSSNSRNSYYMGRAALRSSLESLIVDQLGCEPELQRLRSAVRSEPFNKDSFGRPILPVGVMGSISHKNDYAVGLSSMRPNVNVSDEVSWLADCPVLDTEDESSTADIAGNSNRQTRGIGIDLERINDDRGS--RIQHKVLTEWELSHLGGLESIGISKAQEVMLRFSLKESAYKAMHPIICEYVSFKEAEITPFTDGMAKVELSLKSGLSQIAISAS--WRVADS 368
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|298708529|emb|CBJ49162.1| (4'-phosphopantetheinyl transferase [Ectocarpus siliculosus]) HSP 1 Score: 114.39 bits (285), Expect = 4.627e-25 Identity = 79/209 (37.80%), Postives = 111/209 (53.11%), Query Frame = 0
Query: 178 LHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQ--PIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVL---TRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDNGRFFLTAVWV 381
L PKE+ + + +L FLGGRLA+RR+L + QA+L ++ GAP LP V ASISHKQ LA+ L++S E ++G+DIE+ P+ T RE D LGG+ G+S + E+LLRFS+KE+VYKA +PFL R + F++ EV P ++GG E G W G L+A W+
Sbjct: 129 LLPKEMAYCLGLPR-ALQLGFLGGRLAIRRALNGMEDVSAAASSQAILHNQDGAPVLPEGVSASISHKQHLAVALVQSGCE------GHLGIDIEL----PAVQRRLDLRRRVLTPRECDSLGGVD--GMSDQEEVLLRFSMKEAVYKAAHPFLHRPLGFKDVEVQP-----------VRGGGCEVRTTTRGAW-----GGLRLSAGWM 308
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|1177732077|ref|WP_082821548.1| (hypothetical protein [Gemmatimonas phototrophica]) HSP 1 Score: 92.8189 bits (229), Expect = 4.296e-18 Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 0
Query: 178 LHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQ-PIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTN-----SIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHWRQVDNGRFFLTAVW 380
LHP E LA ++ R F+ GR+ALR ++ +L P+ VLR +GAP LP + S++HK LA+ + + L ++G+D+E RP+ S+A ++LT RE L ++ +L+ F+LKE+VYKAI PF+ RYV F E E+ + L L A + E HW +G + + A +
Sbjct: 44 LHPLEASLARSLPAA-RRATFVAGRVALRDAMAQLADVPLTGNTPVLRTHRGAPLLPPQITGSVTHKSTLAMAAVAPRQG----TLQHVGLDLE---HRPTEADLQRPSVARKILTAREFATLEQFEDASLAQREHVLVHFALKEAVYKAIDPFVERYVRFTEVELNLSDASDVQVTLHLPEPAVSAV-RVEAHWHT--DGDWIVAAAY 241
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|1127364165|gb|APR85568.1| (4'-phosphopantetheinyl transferase entD [Minicystis rosea]) HSP 1 Score: 87.8113 bits (216), Expect = 1.778e-16 Identity = 68/198 (34.34%), Postives = 102/198 (51.52%), Query Frame = 0
Query: 178 LHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGES--ELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPH--VDGTSTIVLFLKGGAAEGLFEAEGHWRQVDN 371
L P+E A +S L R ++ GRLAL +L + P ++L +GAP+LP S+SHK+ +A+ L D + +GVD+E + + I+ ++LT E + G S + E+L+RFS+KES+YKA+ PF++RYV F+EAEV P DG L EG F EG W ++
Sbjct: 32 LLPEEQAFAATLSPL-RRGTWVAGRLALASALTSIGAP---RTSMLSTPRGAPSLPRGFAGSVSHKRRMAVAL---AALDTG---AGLGVDLE--ELVAGAHDISRKILTTAEL----AIVDAGSSQDRFREVLVRFSIKESIYKAVDPFVQRYVGFKEAEVDPGPWSDGIQMARAQLSLEQGEGPFAVEGAWVEIGG 213
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|502593395|ref|WP_012830966.1| (4'-phosphopantetheinyl transferase [Haliangium ochraceum] >gi|262082405|gb|ACY18374.1| 4'-phosphopantetheinyl transferase [Haliangium ochraceum DSM 14365]) HSP 1 Score: 87.4261 bits (215), Expect = 3.610e-16 Identity = 66/172 (38.37%), Postives = 91/172 (52.91%), Query Frame = 0
Query: 198 FLGGRLALRRSLRKL---PQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLFLKGGAAEGLFEAEGHW 366
++ GRLALR +L++L P P+ L +GAP LP SISHK DLA+ L + ++ R +GVDIE + I+ RVLT E D L L G+ + +++ FSLKES+YK+I P+L RYV F E V DG + + L G A E +G W
Sbjct: 62 WVAGRLALRAALQRLGASPGPL------LVSARGAPTLPEGFVGSISHKADLAVAL--AARDEGWR----VGVDIE--RSTMGEQDISRRVLTPGEIDALSELPD-GLRNQY-VMVSFSLKESIYKSIDPYLNRYVGFHEMAVALREDGGAEVTSLLSSGEA---LEVQGWW 214
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|501980547|ref|WP_012682646.1| (hypothetical protein [Gemmatimonas aurantiaca] >gi|226089754|dbj|BAH38199.1| hypothetical protein GAU_1157 [Gemmatimonas aurantiaca T-27]) HSP 1 Score: 84.3445 bits (207), Expect = 1.164e-14 Identity = 66/188 (35.11%), Postives = 95/188 (50.53%), Query Frame = 0
Query: 178 LHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRK-LPQPIRI------------------EQAVLRDEKGAPALPSHVQASISHKQDLAICLL----RSVEEDPNRALSNIGVDIEICQPRPSTN-----SIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEV 337
LH E +LA+ M R F+ GR+ALR ++R +P A LR +G P LPS V S+SHK+ LA+ + R V E L ++GVD+E RP+T+ SIA R+LT +E + A+ + LL+ F++KE++YKAI PF+ RYV F E E+
Sbjct: 56 LHGDEAELALAMPE-GRRGTFVAGRMALRHAMRDAIPMATETATAKGAETSGLLSDASLRHMAFLRTARGGPQLPSAVTGSVSHKRTLALAAIAPRHRRVPE--GGLLQHVGVDLER---RPTTDDLRRPSIARRILTPQEIVWVQARATDPLHEREALLIHFAVKEAIYKAIDPFVHRYVRFTEVEL 237
BLAST of EWM22411.1 vs. NCBI_GenBank
Match: gi|914795615|ref|WP_050726262.1| (hypothetical protein [Vulgatibacter incomptus] >gi|913609487|gb|AKU92035.1| 4'-phosphopantetheinyl transferase entD [Vulgatibacter incomptus]) HSP 1 Score: 77.7962 bits (190), Expect = 5.836e-13 Identity = 57/160 (35.62%), Postives = 85/160 (53.12%), Query Frame = 0
Query: 178 LHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEV 337
LHP+E +A + R+ ++GGRLALR + L + AVLR + P P A++SHK+ LA+ L+ E +GVD+E +P SI R+L E+ + L G L+ RF++KE++YKA++P + RYV F EAEV
Sbjct: 38 LHPEEAAVAGTLRG-RRRVEWVGGRLALREAAAGLGVEL---GAVLRGPRNEPLPPPAFSATVSHKRTLAVGLVAPASE------GTLGVDLEELEP--ERMSILQRILRPEEERRILELPEARRWGA--LVTRFAIKEAIYKALHPHVNRYVGFAEAEV 183 The following BLAST results are available for this feature:
BLAST of EWM22411.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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