EWM22402.1, cds8266 (CDS) Nannochloropsis gaditana

Overview
NameEWM22402.1
Unique Namecds8266
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:288192..290228 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22402.1
Productreplication protein a 70 kda dna-binding subunit
Orig transcript idgnl|cribi|Naga_100067g7.2690.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:288192..290228 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0006281DNA repair
GO:0006310DNA recombination
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR007199Rep_factor-A_N
IPR004591Rfa1
IPR004365NA-bd_OB_tRNA
IPR012340NA-bd_OB-fold
IPR013955Rep_factor-A_C
Homology
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|585102906|gb|EWM22402.1| (replication protein a 70 kda dna-binding subunit [Nannochloropsis gaditana])

HSP 1 Score: 1417.14 bits (3667), Expect = 0.000e+0
Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 0
Query:    1 MLISRTYPVISPNPNRLISLSIDRTPSPHSDLPAEHICLNVAVLMAPNQEITPHTFERIHAGQTKFSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAASTSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQLNSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLGRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN 678
            MLISRTYPVISPNPNRLISLSIDRTPSPHSDLPAEHICLNVAVLMAPNQEITPHTFERIHAGQTKFSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAASTSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQLNSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLGRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN
Sbjct:    1 MLISRTYPVISPNPNRLISLSIDRTPSPHSDLPAEHICLNVAVLMAPNQEITPHTFERIHAGQTKFSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAASTSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQLNSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLGRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN 678          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|695387406|ref|XP_009518872.1| (hypothetical protein PHYSODRAFT_556228 [Phytophthora sojae] >gi|348683769|gb|EGZ23584.1| hypothetical protein PHYSODRAFT_556228 [Phytophthora sojae])

HSP 1 Score: 462.611 bits (1189), Expect = 1.129e-151
Identity = 266/640 (41.56%), Postives = 390/640 (60.94%), Query Frame = 0
Query:   51 ITPHTFERIHAGQTK--FSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPP-----YNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYIN-RWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAASTSISSGGGGGGGGGG--FADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQL-NSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILL-GRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN 678
            +TP+    ++  QT   F P +Q++D K+++P  G  G  RYR+++SDGT Y   MLATQL  ++    +  + ++ L++++ NEVQGR+I+I+L    + P+   R+G+P           G +G            PA +  A  + P + +    +   N    PP     Y             GPVVR  P   +  I  LNPY   RW IKARVT++  IK W+NA+G G LFSVDLLD   GEIRATFF +  +KFY  L  G V+ F+GGK+K A R++SS+ N+YE TFD +S+I    +D +I    Y+FKKI E+E  P  A +DVIG+V+    ++ IT+K  G+++ KR+++L DD+  E++ T+W ERA +    W N  +VA KG +VSDYNGRS+GTM  S  TV+P +PEA HL NW+ + G  A + S+SSGGGG GGG    FA+R V++ IK +QLGFG+KPDY+ VK T+ +IK D   +Y++C  P C++KV   +  +Y CEKCQ     C  RYIL+V   DH+GS + +CF++   +++ GR+A+E+   + ++    Y++TF+EA F  ++ RLRVKAE V +E RVK+ ++N+ PVN VQE +DL+ AI  YN
Sbjct:    4 LTPNAVSMLYNKQTPDGFEPWLQIIDTKKIKPASGTGGD-RYRIVLSDGTSYISGMLATQLAPMMENESLKTNYVLQLKDYLGNEVQGRRILIVLSIGDIVPAFD-RIGNPQSIE-------GSKGAPIPAAPAASAPPAASLGARPAAPVQSSFQQPSAPVNQYNQPPAAPLSYAPPAKPAPSAYNRGPVVRQDPNVRLSDIQSLNPYAGGRWTIKARVTNRAPIKNWTNARGSGKLFSVDLLDARGGEIRATFFNDGVDKFYETLRPGGVFYFAGGKVKMANRRFSSVDNDYEVTFDQHSDISPAPEDGQISQMNYTFKKIAEIESVPAEANVDVIGIVRDVGQVNEITSKA-GKQLFKRDISLVDDSNAEIKCTMWNERAKEDCSSWLNQ-VVAIKGCRVSDYNGRSIGTMMSSSFTVNPTIPEAGHLVNWFSNGGNAAQTKSLSSGGGGFGGGSLGTFAERAVINDIKGKQLGFGQKPDYITVKGTVNFIKHDTGVFYQAC--PKCQKKVVADVAQNYTCEKCQTSYSNCENRYILSVVMLDHTGSTWTTCFNDQGKVVMNGRTADEIGELRDTN-PTLYESTFKEALFKQYVCRLRVKAENVQEELRVKAGVVNLEPVNFVQESKDLLQAIAQYN 629          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|325187250|emb|CCA21790.1| (replication protein A 70 kDa DNAbinding subunit puta [Albugo laibachii Nc14])

HSP 1 Score: 456.447 bits (1173), Expect = 1.663e-149
Identity = 254/618 (41.10%), Postives = 380/618 (61.49%), Query Frame = 0
Query:   66 FSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQG-GQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYIN-RWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAAST--SISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQL-NSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLG-RSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAY 677
            F P +Q++D K+++P  G  G  RYR+I+SDGT +   MLATQL  L+    + E+ ++ L++++ N+VQGR+I+I+L    + P+   R+G+P        G       G PV       +P++ +++   +      SS+       +   +             G VVR  P   +  I  LNPY   RW IKARVT++  IK W+NA+G+G LFS+DLLD   GEIRAT F +A +KFY +L  G V+ FSGGK++ A R++SS+ N+YE TFD +SEI    DD  IQ   Y+FKKIG LE+ P +A IDVIGVVK   P+S I +K  G+++ KR+L L DD+  EVR+T+W ERA +    W N+ ++A KG ++S+YNGRS+GT+  S   V+P +PEA  L +W+++ G+T+ +T  S+ S G GGG  G FA+R  L  IK  QLGF +KPDY+ VK T+ YIK D   +Y++CT   C +KV   +  +Y CEKCQ     C  RYI+++   DH+GS +++CF++   ++L  R+A+E+   K ++  A ++A F+EA F +++ RLR+KAE V  E RVK  ++N+ P++ V+E +DL+ AI  Y
Sbjct:   11 FEPWLQIIDIKKIKPASG-AGSDRYRIILSDGTSFISGMLATQLVPLMQNESLKENFVVQLKDYLGNDVQGRRILIVLSLGEIKPAYE-RIGNPQSIESINAGRASTPSLGVPVPKPLSIPSPSVQSLSINQLTRTEMTSSTHAVDGQSSISNH------------KGSVVREDPNIRLSDIQSLNPYAGGRWTIKARVTNRAPIKNWTNARGQGKLFSIDLLDSKGGEIRATMFNDAVDKFYDVLRPGQVFYFSGGKIRMANRKFSSVNNDYEITFDQHSEISLASDDRGIQQMNYNFKKIGTLEKLPADANIDVIGVVKQVEPMSEIISKA-GKQLFKRDLVLVDDSMAEVRVTLWNERAQEDCSSWTNN-VLAIKGCRISEYNGRSIGTLSSSSFNVNPTIPEAGFLLSWYNNGGSTSETTSLSVGSSGFGGGSLGSFAERANLMDIKARQLGFDQKPDYITVKGTVNYIKHDSGLYYQACTK--CNKKVIADVAQNYSCEKCQTVYKTCENRYIMSLVIADHTGSSWVTCFNDQGRVILNKRTADEIAEIKDTNT-ALFEAVFKEALFKSYVWRLRIKAENVQGESRVKVNVVNLEPIDYVKESKDLLHAISKY 609          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|301115057|ref|XP_002999298.1| (replication protein A 70 kDa DNA-binding subunit, putative [Phytophthora infestans T30-4] >gi|262111392|gb|EEY69444.1| replication protein A 70 kDa DNA-binding subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 453.366 bits (1165), Expect = 4.671e-148
Identity = 251/644 (38.98%), Postives = 389/644 (60.40%), Query Frame = 0
Query:   51 ITPHTFERIHAGQTK--FSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPS---------GPVVRAGPPQSIIPINDLNPYIN-RWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAAS--TSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQL-NSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILL-GRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN 678
            +TP+    ++  Q    F P +Q++D K+++P  G  G  RYR+++SDGT Y   MLATQL  ++    +  + ++ L++++ NEVQGR+I+I+L+   + P     +G P           G +G            PA    A ++ P +P+       +N    PP     A   Y  P+         GPVVR  P   +  I  LNPY   RW IKARVT+++ IK W+N++G G LFSVDLLD   GEIRATFF +  +KFY +L  G ++ F+GGK+K   R++SS+ N+YE TFD +S+I    +D +I    Y+FKKI E+E  P ++ +D+IG+V+  +P++  T+K  G+++ KR+++L DD+  E++ T+W E+A ++   W N  ++A KG +VS++NGRSL T   S  TV+P +PEA HL  W+ + G    +   S   GG GGG  G F++R V++ IK +QLGFG+KPDY+ VK T+ +IK D   +Y++C  P C++KV   +  +Y CEKCQ   P C  RYIL+V   DH+GS + +CF++   +++ GR+A+E+   + ++  A +++ F+EA F  ++ RLRVKAE V +E RVK++++N+ PVN VQE +DL+ AI  YN
Sbjct:    4 LTPNAVSMLYHNQVPDGFEPWLQIIDTKKIKPASGTGGD-RYRIVLSDGTSYLSGMLATQLAPMMENESLKTNYVLQLKDYLGNEVQGRRIIIVLKVGNIVPHFDC-IGSPQNID-------GSRGPSVPAASSASVPPAAALGARSAAPAQPSYQQPRAPTNQFQQPP----AAPSSYTPPTKPAASTYNRGPVVRQDPNIRLSDIQSLNPYAGGRWTIKARVTTRSPIKNWTNSRGSGKLFSVDLLDAKKGEIRATFFNDGVDKFYEMLRPGGIFYFAGGKVKMTNRRFSSVDNDYEVTFDPHSDISPAPEDGQISQMQYAFKKIAEIENVPADSNVDIIGIVRDVTPVNEFTSKA-GKQLFKRDISLVDDSNVEIKCTMWNEQAQQECSNWLNQ-VLAIKGCRVSEFNGRSLSTAGSSSFTVNPTIPEAGHLVTWFSNGGNATQTKSLSSGGGGFGGGSLGSFSERAVINDIKSKQLGFGQKPDYITVKGTVNFIKHDTGIYYQAC--PKCQKKVVADVAQNYTCEKCQTSYPNCENRYILSVIMLDHTGSTWTTCFNDQGKVVMGGRTADEIGELRDTN-PALFESIFKEALFKQYVCRLRVKAENVQEELRVKASVVNLEPVNFVQESKDLLQAIAQYN 629          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|1126159812|ref|XP_019621789.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit-like isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 451.825 bits (1161), Expect = 1.608e-147
Identity = 259/644 (40.22%), Postives = 374/644 (58.07%), Query Frame = 0
Query:   55 TFERIHAGQTKFSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQ-AMLATQLNVLINEGQITEHGLICLEEFICNEVQ-GRKIVIILRCHVV-SPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGS---------SSAGSSNAGAYPPYNSGGAA----GGYRAPSGPV--VRAGPPQ----SIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAASTSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQLNSYF-CEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLGRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIK 675
            T + I  G +  SPV+QV+  K++Q + G  G  RYRL++SDG H Q  AMLATQ N L+N GQ+ +H +I LE++ICN +Q  R+++I+L   V+ +P +  ++ +P    +A GG                 APA N   G+S   +P  S          S+ + N G   P N GGA     GG  A   P   V A P         PI  LNPY NRW I+ARVT+K  I+ WSNA+GEG LFS+DLLDE  GEIRAT F + C+KFY L+E G VY  S G LK A +QY+SI+N+YE +F+ ++ ++   D+  + S  Y+F  I +LEE  PN  ID+IGV K++  ++TITT++  REV KR+L + D +G +V LT+WG  A K      + P+VA KG ++SD+ GRSL T+  S V ++PD+PEA  L  W+   G  + + SIS+G GGG G     + K   Q+ +E LG GEKPDY   K T+ ++K +    Y++C + DC +KV +  N +F CEKC +E P   YR IL  +  D+SG+ + +CF E A  +L ++ E L + K  D    +D  F EA F ++I  +RVK +  NDE R++ + +  +PV+  +  + LI  I+
Sbjct:    9 TIQEIANGGSPKSPVLQVLGIKKIQ-SAGAQGSERYRLLLSDGKHTQSSAMLATQQNHLVNSGQLEQHCVIRLEKYICNTIQDNRRVLIMLEVQVLGNPKI--KIKNPTPVNQAGGG---------------APAPAQNASFGSSYGRRPLTSVPQPSFYRGGSSHAVNGGMNRPGNQGGAGRPNQGGSGASFYPRSNVAASPGTPGRGKPTPIAGLNPYQNRWTIRARVTNKGSIRTWSNARGEGKLFSMDLLDE-SGEIRATAFNDQCDKFYDLIEIGKVYFISKGGLKTANKQYTSIQNDYEMSFNNDTTVVLCEDESDLPSITYNFVPIEKLEEMNPNTIIDLIGVCKSYGDVTTITTRQTNREVNKRDLQIVDMSGKQVNLTLWGGEADK--FDGSSCPVVAIKGARLSDFGGRSLSTVGSSTVMINPDIPEAFQLRGWYDKVGCNSEAQSISTGAGGGAGRP--TNWKSFKQVIDENLGTGEKPDYFSTKGTIVFMKKE-SAMYQACPTQDCNKKVVDLQNGFFSCEKCSKEFPNFKYRLILQANVADYSGNQWTTCFSEQAETILEQNTEYLGNMKDQD-DTGFDQVFTEANFKSYIFTMRVKMDTYNDESRIRCSCVGAQPVDFKEYSKKLINEIR 627          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|1126159814|ref|XP_019621798.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 451.055 bits (1159), Expect = 2.141e-147
Identity = 252/625 (40.32%), Postives = 367/625 (58.72%), Query Frame = 0
Query:   55 TFERIHAGQTKFSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQ-AMLATQLNVLINEGQITEHGLICLEEFICNEVQ-GRKIVIILRCHVV-SPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAASTSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQLNSYF-CEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLGRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIK 675
            T + I  G +  SPV+QV+  K++Q + G  G  RYRL++SDG H Q  AMLATQ N L+N GQ+ +H +I LE++ICN +Q  R+++I+L   V+ +P +  ++ +P    +A GG        P   Q    + A+N           AG  + G S A  YP  N   + G    P     R  P     PI  LNPY NRW I+ARVT+K  I+ WSNA+GEG LFS+DLLDE  GEIRAT F + C+KFY L+E G VY  S G LK A +QY+SI+N+YE +F+ ++ ++   D+  + S  Y+F  I +LEE  PN  ID+IGV K++  ++TITT++  REV KR+L + D +G +V LT+WG  A K      + P+VA KG ++SD+ GRSL T+  S V ++PD+PEA  L  W+   G  + + SIS+G GGG G     + K   Q+ +E LG GEKPDY   K T+ ++K +    Y++C + DC +KV +  N +F CEKC +E P   YR IL  +  D+SG+ + +CF E A  +L ++ E L + K  D    +D  F EA F ++I  +RVK +  NDE R++ + +  +PV+  +  + LI  I+
Sbjct:    9 TIQEIANGGSPKSPVLQVLGIKKIQ-SAGAQGSERYRLLLSDGKHTQSSAMLATQQNHLVNSGQLEQHCVIRLEKYICNTIQDNRRVLIMLEVQVLGNPKI--KIKNPTPVNQAGGG-------APAPAQNGGSSHAVNGGMNRPGNQGGAGRPNQGGSGASFYPRSNVAASPG---TPG----RGKP----TPIAGLNPYQNRWTIRARVTNKGSIRTWSNARGEGKLFSMDLLDE-SGEIRATAFNDQCDKFYDLIEIGKVYFISKGGLKTANKQYTSIQNDYEMSFNNDTTVVLCEDESDLPSITYNFVPIEKLEEMNPNTIIDLIGVCKSYGDVTTITTRQTNREVNKRDLQIVDMSGKQVNLTLWGGEADK--FDGSSCPVVAIKGARLSDFGGRSLSTVGSSTVMINPDIPEAFQLRGWYDKVGCNSEAQSISTGAGGGAGRP--TNWKSFKQVIDENLGTGEKPDYFSTKGTIVFMKKE-SAMYQACPTQDCNKKVVDLQNGFFSCEKCSKEFPNFKYRLILQANVADYSGNQWTTCFSEQAETILEQNTEYLGNMKDQD-DTGFDQVFTEANFKSYIFTMRVKMDTYNDESRIRCSCVGAQPVDFKEYSKKLINEIR 605          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|635371602|emb|CCI40312.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 449.129 bits (1154), Expect = 1.233e-146
Identity = 254/622 (40.84%), Postives = 386/622 (62.06%), Query Frame = 0
Query:   66 FSPVVQVM----DFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQG-GQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYIN-RWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAAST--SISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQL-NSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLG-RSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAY 677
            F P +QV+    D K+++P  G  G  RYR+I+SDGT +   MLATQL  L+    + E+ ++ L++++ N+VQGR+I+I+L    + P+   R+G+P     + GG       G PV   +P   P+ +++   S+  +     +  +  AG     N+           G VVR  P   +  I  LNPY   RW IKARVT++  IK W+NA+G+G LFS+DLLD   GEIR T F +A +KFY +L  G V+ FSGGK++ A R++SS+ N+YE TFD +SEI    DD  IQ   Y+FKKIG LE+ P +A +DVIGVVK   P+S I +K  G+++ KR+L L DD+  EVR+T+W +RA +    W N+ ++A KG ++S+YNGRS+GT+  S  +V+P + EA  L +W+++ G+T+ +T  S+ S G GGG  G FA+R  L+ IK  QLGF +KPDY+ VK T+ YIK D   +Y++CT   C +KV   +  +Y CEKCQ     C  RYI+++   DH+GS +++CF++   ++L  R+A+E+   K ++  A ++  F+EA F +++LRLR+KAE V  E RVK  ++N+ P++ ++E +DL+ AI+ Y
Sbjct:   11 FEPWLQVLMHIIDIKKIKPASG-AGSDRYRIILSDGTSFISGMLATQLVPLMQNESLKENYIVQLKDYLGNDVQGRRILIVLSLGEIKPAYE-RIGNPQSIESSNGGRPATPSVGIPV--PKPLSLPS-SSVQSMSIHQQARTEMTPSTHAAGGRASINN---------QKGSVVREDPNIRLSDIQSLNPYTGGRWTIKARVTNRAPIKNWTNARGQGKLFSIDLLDSKGGEIRGTMFNDAVDKFYDVLRPGQVFYFSGGKIRMANRKFSSVNNDYEITFDQHSEISLASDDRGIQQMNYNFKKIGMLEKLPADANVDVIGVVKQLEPVSEIISKA-GKQLFKRDLVLVDDSMAEVRVTLWNDRAQEDCSSWVNN-VLAIKGCRISEYNGRSIGTLSSSHFSVNPAISEAGFLLSWYNNGGSTSETTSLSVGSSGFGGGSLGSFAERANLTDIKGRQLGFDQKPDYITVKGTVNYIKHDSGLYYQACTK--CNKKVIADVAQNYSCEKCQTVYKTCENRYIMSLVIVDHTGSSWVTCFNDQGRVILNKRTADEIAEIKDTNT-ALFETIFKEALFKSYVLRLRIKAENVQGESRVKVNVVNLEPIDYMKESKDLLHAIRKY 613          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|813185975|ref|XP_012207159.1| (hypothetical protein SPRG_10939 [Saprolegnia parasitica CBS 223.65] >gi|641527858|gb|KDO22120.1| hypothetical protein SPRG_10939 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 442.965 bits (1138), Expect = 4.465e-144
Identity = 253/639 (39.59%), Postives = 388/639 (60.72%), Query Frame = 0
Query:   51 ITPHTFERIHAGQTK--FSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGY-RVGDPVEYGKAAGGNGGMQG---GQPVYGQQPQQAPALNTMAGASVP-YKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYIN-RWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQP-EQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATAASTSISSGGGGGGGGGG-FADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQ-LNSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILL-GRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAY 677
            +TP+  + +H+ Q+   F P +Q++D K++    G+ G  RYRL++SDG +Y   ML++QL+    +G ++ +  + L +++ N VQGRKI+I+L    V P  GY R+G P    KA  G+  +       P Y     QAP+    A    P Y P  + +   +      PY +            PVVR  P   I  I  LNPY   RW IKARVT++  +K W+NA+G+G L S DLLD   GEIRAT F +A + FY  L    V+ FSGGK+K A R+YS+I N+YE TFD +S+I+   +DH IQ+  Y+FK I  +E  PP +TID+IG+VK  +P + +T+K  G++++KR++T+ DDT  E+++T+W ERA     + W +  ++A KG +VS+YNGRS+GT   +   ++P LPE+  L NW+   GA+ A+ S+S GGGG   G G F  R +++ IK+ +LG+G+KPDY+ +K  ++YIK D +  Y++C  P C++KV +    +Y CEKCQ  +P C  RYIL++   D +GS + S F++   I++ G++A+EL   K +++ + Y++ F+ A F T++ R+R KAE   D+ RVKS I+N+ P+N VQE  +L+ AI  Y
Sbjct:    4 LTPNAVQMLHSRQSPDGFQPWLQLIDIKKIPSASGKGGD-RYRLVLSDGQYYMSGMLSSQLSNATEDGTLSINCFVQLMDYVGNTVQGRKILILLGLGDVHP--GYERIGAPESIEKA--GSAPVPAPTYAAPTYAAPTYQAPSYQAPAPVQQPSYLPQAAPAHTPATTMTRNPYAAPAMN------KAPVVREDPNMRISDIASLNPYSGGRWTIKARVTARAPVKNWTNARGQGKLCSFDLLDAKGGEIRATLFNDAVDAFYDRLVPNGVFFFSGGKIKMANRKYSAINNDYEVTFDASSDIVPAGEDHAIQAVQYNFKPITSIESVPPESTIDMIGIVKTVAPCAELTSKA-GKQLQKRDITMVDDTLAEIKVTLWSERAQDPTCDTWVDQ-VLAIKGCRVSEYNGRSIGTFSSTGFVLNPPLPESARLLNWYRGGGASTATKSLSVGGGGVSAGMGTFDQRSLVTDIKDRRLGYGQKPDYITLKGAVSYIKHDANVSYQAC--PKCQKKVVQDAARNYNCEKCQSSLPTCENRYILSLVLQDSAGSTWASAFNDQGKIIMQGKTADELFELKDANV-SLYESLFKAALFKTYLFRVRCKAEPHMDDLRVKSQIVNLEPLNYVQESAELLDAIAKY 626          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|1214703659|gb|OWZ15637.1| (DAN Replication protein [Phytophthora megakarya])

HSP 1 Score: 442.58 bits (1137), Expect = 5.581e-144
Identity = 248/636 (38.99%), Postives = 383/636 (60.22%), Query Frame = 0
Query:   51 ITPHTFERIHAGQTK--FSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGAS-VPYKPAGSSSAGSSNAGAYPPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYIN-RWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAG--ATAASTSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQLNSYF-CEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILL-GRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN 678
            +TP+    +   Q    F P +QV+D K+++P  G  G  RYR+I+SDG+ Y   MLATQL  ++    +  + ++ L++F+ N+VQGR+I+I+L            VGD V +  A G    ++G +      P  +       GA   P +P+    A  +   A   Y +           GPVVR  P   +  I  LNPY   RW IKARVT+++ ++ WSNA+G G LFS+DLLD   GEIR TFF +  +KFY +L  G V+ F+GGK+K   R++SS+ N+YE +FD +S+I    +D +I    Y+FKKI E+E  P ++ +DVI +V+    ++ IT+K  G+++ KR+++L DD+  E++ T+W E A +    W N  ++A KG +VS++NGRS+GT  GS  TV+P +PEA HL +W+ + G    A S S   GG GGG  G FA+R +++ IK +QLGFG+KPDY+ VK T+ +IK D   +Y++C  P C++KV   +   F CEKCQ     C  RYIL+V   DH+GS + +CF++   +++ GR+A+E+   + ++  + +++ F++A F  ++ RLRVKAE V +E RVK++++N+ PVN VQE +DL+ AI  Y+
Sbjct:    4 LTPNAVSMLFNKQAPDGFEPWLQVIDTKKIKPASGTGGD-RYRIILSDGSSYISGMLATQLAPMMENESLQTNFVLQLKDFLVNDVQGRRILIVLN-----------VGDIVPHFDAIGSPQNIEGAKGPAVPAPASSAPPAAALGARPAPARPSYQQPAQPTPPTAPSSYTAPARPAPSAYNRGPVVRQDPNIRLSDIRSLNPYAGGRWTIKARVTTRSQVRTWSNARGSGKLFSIDLLDANGGEIRGTFFNDGVDKFYEMLRPGGVFFFAGGKVKMTNRKWSSVDNDYEISFDPHSDISPAPEDGQISQMNYAFKKIAEIESVPADSNLDVIAIVRDVGQVNEITSKA-GKQLFKRDISLVDDSNAEIKCTMWNESAKEDCSSWLNQ-VLAIKGCRVSEFNGRSIGTTSGSSFTVNPAIPEAGHLVSWFSNGGNATQAKSLSSGGGGFGGGSLGTFAERAIINDIKGKQLGFGQKPDYITVKGTVNFIKHDTGIYYQAC--PKCQKKVVPDVAGNFTCEKCQTSYDHCENRYILSVVMLDHTGSTWTTCFNDQGKVVMNGRTADEIGELRDTN-PSLFESIFKDALFKQYVCRLRVKAENVQEELRVKASVVNMEPVNFVQESKDLLQAIAQYS 622          
BLAST of EWM22402.1 vs. NCBI_GenBank
Match: gi|1173945860|gb|OQR94443.1| (replication protein A 70 kDa DNA-binding subunit [Achlya hypogyna])

HSP 1 Score: 441.039 bits (1133), Expect = 1.959e-143
Identity = 265/641 (41.34%), Postives = 379/641 (59.13%), Query Frame = 0
Query:   51 ITPHTFERIHAGQTK--FSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGY-RVGDPVEYGKAAGGNGGMQGGQPVYGQQPQQAPALNTMAGASVPYKPAGSSSAGSSNAGAYPPYNSGGAAGG---YRAPS---GPVVRAGPPQSIIPINDLNPYIN-RWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQP-EQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAG-ATAASTSISSGGGGGGGGGGFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPDPWYRSCTSPDCKRKVTEQL-NSYFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILL-GRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAY 677
            +TP+    +H  Q    F P VQ++D K++    G+ G  RYRL++SDG H+   ML++QL+  + +G ++ +  + L++++ N VQGRKI+I+L    V P  GY RVG P    K      G             Q PA  T    + P KP              P YN+  A      Y AP+    PVVR  P   I  I  LNPY   RW IKARVT++  IK W+NA+G+G L SVDLLD   GEIRAT F +A + FY  L    V+ FSGGK+K A R++S+I N+YE TFDT+S+I+   +DH IQS  Y+FK IG +E   P++TID+IG+VK   P + +T+K  G++++KR+ TL DDT  E+++T+W ERA     + W +  ++A KG +VSDY GRS+GT   +    +P LPEA  L NW+ + G ATA  +   SGGG GGG G F  R V++ IKE +LG+G+KPDY+ VK T++YIK D    Y++C    C++KV   +  +Y CEKCQ     C  RYIL++   D SGS + SCF++   I++ G++A+E+   K ++    Y+ TF+ A F T++ R+R KAE   D+ RVKS ++++ P+N V E  DL+ AI  Y
Sbjct:    4 LTPNAVSMLHTRQNPDGFEPWVQLIDLKKIPSASGKGGD-RYRLMLSDGQHFMSGMLSSQLSTAMEDGTLSVNCFVKLKDYVGNTVQGRKILILLGIAEVQP--GYERVGAPESIDKV-----GAAAAAAPAAAPAYQPPAQPTYVPQAAP-KPT-------------PAYNAAPAPMARNPYAAPAVNKAPVVREDPGMRISDIASLNPYSGGRWTIKARVTARAPIKNWTNARGQGKLCSVDLLDAKGGEIRATLFNDAVDAFYDRLVPNGVFYFSGGKIKMANRKFSAINNDYEVTFDTSSDIVPAAEDHAIQSVQYNFKPIGSIETVAPDSTIDMIGIVKTVGPCTELTSKA-GKQLQKRDCTLVDDTLAEIKVTLWSERAQDPACDSWLDQ-VLAIKGCRVSDYGGRSIGTFSSTGFVTNPPLPEAARLLNWYRAGGSATATKSLSGSGGGVGGGMGSFDQRAVVNDIKERRLGYGQKPDYITVKGTVSYIKHDSGVSYQACVK--CQKKVVPDVAQNYNCEKCQTVYASCENRYILSMVVQDGSGSTWASCFNDQGKIIMQGKTADEMAELKDANFNL-YEGTFKAALFKTYLFRMRCKAEPHQDDVRVKSQVVSVEPINYVTESHDLLEAIAKY 617          
The following BLAST results are available for this feature:
BLAST of EWM22402.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102906|gb|EWM22402.1|0.000e+0100.00replication protein a 70 kda dna-binding subunit [... [more]
gi|695387406|ref|XP_009518872.1|1.129e-15141.56hypothetical protein PHYSODRAFT_556228 [Phytophtho... [more]
gi|325187250|emb|CCA21790.1|1.663e-14941.10replication protein A 70 kDa DNAbinding subunit pu... [more]
gi|301115057|ref|XP_002999298.1|4.671e-14838.98replication protein A 70 kDa DNA-binding subunit, ... [more]
gi|1126159812|ref|XP_019621789.1|1.608e-14740.22PREDICTED: replication protein A 70 kDa DNA-bindin... [more]
gi|1126159814|ref|XP_019621798.1|2.141e-14740.32PREDICTED: replication protein A 70 kDa DNA-bindin... [more]
gi|635371602|emb|CCI40312.1|1.233e-14640.84unnamed protein product [Albugo candida][more]
gi|813185975|ref|XP_012207159.1|4.465e-14439.59hypothetical protein SPRG_10939 [Saprolegnia paras... [more]
gi|1214703659|gb|OWZ15637.1|5.581e-14438.99DAN Replication protein [Phytophthora megakarya][more]
gi|1173945860|gb|OQR94443.1|1.959e-14341.34replication protein A 70 kDa DNA-binding subunit [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8290rna8290Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications