EWM22388.1, cds8264 (CDS) Nannochloropsis gaditana

Overview
NameEWM22388.1
Unique Namecds8264
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:285376..285465 -
Alignment locationKK037248.1:284399..285211 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22388.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100067g5.2676.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:285376..285465 -
KK037248.1supercontigKK037248.1:284399..285211 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22388.1 vs. NCBI_GenBank
Match: gi|585102892|gb|EWM22388.1| (hypothetical protein Naga_100067g5 [Nannochloropsis gaditana])

HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 
Query:    1 MKHSPSTLLLFLCVATFSGPGSVEVGAFYLTPRVSTGADITSPVIVRAMRLQNFGTYRKSARVLSWVFPQFLRQIMFRGARHGSSTSRSSRSRSRTSGTNDAGPAPRTGRLAATALSYQVGPSFLQRMSAVSYNGVEGEGGRPSQQSVQQPQPQSAQQNVRPALNGEGGLAGAQENSDVIPILIKYTGGVGYKSLYTGVCRVLKERFGNIAIRKTILGVTEVRGGKKLGIFEVVIGDRSFTSKPGAVGVYLPMADLQAAIERVVVRREKENKMLAAAAAAVSAVASDGSDGISYQESIHP 300
            MKHSPSTLLLFLCVATFSGPGSVEVGAFYLTPRVSTGADITSPVIVRAMRLQNFGTYRKSARVLSWVFPQFLRQIMFRGARHGSSTSRSSRSRSRTSGTNDAGPAPRTGRLAATALSYQVGPSFLQRMSAVSYNGVEGEGGRPSQQSVQQPQPQSAQQNVRPALNGEGGLAGAQENSDVIPILIKYTGGVGYKSLYTGVCRVLKERFGNIAIRKTILGVTEVRGGKKLGIFEVVIGDRSFTSKPGAVGVYLPMADLQAAIERVVVRREKENKMLAAAAAAVSAVASDGSDGISYQESIHP
Sbjct:    1 MKHSPSTLLLFLCVATFSGPGSVEVGAFYLTPRVSTGADITSPVIVRAMRLQNFGTYRKSARVLSWVFPQFLRQIMFRGARHGSSTSRSSRSRSRTSGTNDAGPAPRTGRLAATALSYQVGPSFLQRMSAVSYNGVEGEGGRPSQQSVQQPQPQSAQQNVRPALNGEGGLAGAQENSDVIPILIKYTGGVGYKSLYTGVCRVLKERFGNIAIRKTILGVTEVRGGKKLGIFEVVIGDRSFTSKPGAVGVYLPMADLQAAIERVVVRREKENKMLAAAAAAVSAVASDGSDGISYQESIHP 300
The following BLAST results are available for this feature:
BLAST of EWM22388.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102892|gb|EWM22388.1|0.000e+0100.00hypothetical protein Naga_100067g5 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8288rna8288Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications