EWM22438.1, cds8258 (CDS) Nannochloropsis gaditana

Overview
NameEWM22438.1
Unique Namecds8258
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:271586..272292 +
Alignment locationKK037248.1:272457..272967 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22438.1
Productgeranylgeranyl transferase type-2 subunit alpha
Orig transcript idgnl|cribi|Naga_100011g94.3438.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:271586..272292 +
KK037248.1supercontigKK037248.1:272457..272967 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008318protein prenyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0018342protein prenylation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR002088Prenyl_trans_a
Homology
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|585102944|gb|EWM22438.1| (geranylgeranyl transferase type-2 subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVLEKEVKVLRELVEEGEAEGGGYRWAVLTLADLLGKLARRKEGKSEEASLRAESQKLLKRLPALDPDHAGRYQDMLDSLP 405
            MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVLEKEVKVLRELVEEGEAEGGGYRWAVLTLADLLGKLARRKEGKSEEASLRAESQKLLKRLPALDPDHAGRYQDMLDSLP
Sbjct:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVLEKEVKVLRELVEEGEAEGGGYRWAVLTLADLLGKLARRKEGKSEEASLRAESQKLLKRLPALDPDHAGRYQDMLDSLP 405          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|553181255|ref|XP_005853534.1| (rab alpha subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422295527|gb|EKU22826.1| rab alpha subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 278.1 bits (710), Expect = 1.900e-90
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query:   15 ARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRR 148
            ARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRR
Sbjct:    1 ARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRR 134          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|299116084|emb|CBN74500.1| (Rab geranylgeranyltransferase alpha [Ectocarpus siliculosus])

HSP 1 Score: 178.718 bits (452), Expect = 2.074e-48
Identity = 129/430 (30.00%), Postives = 200/430 (46.51%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEA---EGGETEKEECESEREGGKAPLPP------GSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLA-----LAWDTEREKE--------LGERGDQELTPRGVSFAQRVLEKEVKVLRE------LVEEGEAEGGGYRWAVLTLADLLGKLARRKEGKSEEASLRAESQKLLKRLPALDPDHAGRYQDMLD 402
            MHGR+K +     L +++ EK+A + K+  YK+++     +R           TG+       L  +LLR++PD Y++WN RKE ++A     ++A   +GG  + ++   E   G    P           + EL L +DCI++NPKSY AWHH +W L+    L                       +  L  +L LCA  L+LD RNFHCW++R WV  +    + R+EF+F+T +I +NFSNYSAFH R+      + EA    D    L  ELD+   A+FTEP DQ+ WWYH  L++ A        D+ER +         LGE  + E+  +    A  ++ + +    E        ++ E   GG            G +     G +E   +R   + +  RL  LDP H GR+ + ++
Sbjct:    1 MHGRKKSD-----LPQTKEEKDAVRAKISNYKKVVGAIRHKR----------ATGQMDAEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQKKKIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGG--------------------RSALAGDLALCATFLELDGRNFHCWAHRMWVAERM-GLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEA--GHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCKWAEVALLLVSQRLANALEPRPQPPRAQDDETNNGG------------GGVTAAGNGSTEAGEVRESCRGMAARLSELDPMH-GRFYEFVE 379          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|926638497|ref|XP_013785268.1| (PREDICTED: geranylgeranyl transferase type-2 subunit alpha-like, partial [Limulus polyphemus])

HSP 1 Score: 163.31 bits (412), Expect = 1.934e-44
Identity = 111/297 (37.37%), Postives = 149/297 (50.17%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLE----RELDMVQQAVFTEPDDQTAWWYHQHLI 293
            MHGR K +      A  QAEKE  + K     QL +   Q+  E R  KE        D  L +S Q+L+ NPD YT WN R+E++      R E E  +  +EE                     L L+ +C+RKNPKSYGAW+ R W+L                    P P   R+L+        LC + LDLDERNFHCW YRR+V  KH    P +E +F+  ++  NFSNYSA+H+R+S     L   HP+ +  S  E    +E D+VQ AVFT+P DQ+AW+YH+ L+
Sbjct:    1 MHGRLKVK----TTAEQQAEKEKERQKKL---QLFKAGTQKIFEKRKIKEYD------DEGLSISGQILQANPDFYTCWNIRREILTQLKDERTEEEFQQLSQEE---------------------LYLIENCLRKNPKSYGAWNQREWIL-----------------MFMPTPDWERELQ--------LCNRFLDLDERNFHCWDYRRFVC-KHSNVGPDEELKFTLKKVEANFSNYSAWHYRSS----LLPIVHPSCERNSVAEAILLKEYDLVQNAVFTDPSDQSAWFYHRWLL 233          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|552940696|gb|ESA23690.1| (hypothetical protein GLOINDRAFT_104680 [Rhizophagus irregularis DAOM 181602] >gi|595494818|gb|EXX77307.1| Bet4p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 161.384 bits (407), Expect = 2.399e-42
Identity = 125/412 (30.34%), Postives = 209/412 (50.73%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDND-LVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPART----PRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLD---PPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPR-GVSFAQRV--LEKEVKVLRELVE-EGEAEGGGYRWAVLTLADLLGKLARRKEGKSEEASLRAESQKLLKRLPALDPDHAGRYQDM 400
            MHGR++ +     + + + EKE  K K  +Y+ L+E   Q++ +           +  DND L L++++L  NPD Y++WN R+ +I+ +G+L+   E  E +K++                 L TEL  + +  + NPKSY  ++HRRW L+            NP                  D+EL L  K L+LD RNFH W YRR+V SK    T     + EF+F+T++I +NFSNYSA+H R+      ++E   NLD       +++E ++V+ A +T+PDDQ+AW YH  L++      T +  E  +     L     ++ ++R+  L++E+ V+REL+E E ++     ++ + TLA+LL +L  +   K +   +  E   +  RL  +D     RY+D+
Sbjct:    1 MHGRKRVK-PSAEVEKLRKEKEVTKIK--EYRNLVESYFQKKDK-----------KEFDNDALALTTKILSQNPDFYSIWNFRR-LILLNGLLK---ECSEEDKQQT----------------LSTELVFLQELFQLNPKSYWIFNHRRWCLE---------TMQNPD----------------WDKELQLVGKFLELDARNFHAWDYRRYVTSKLSCTTETSLTQIEFDFTTTKINQNFSNYSAWHQRSKLLPLLIKE--KNLDEQEKKKLIDKEFELVKAAFYTDPDDQSAWLYHWWLVAQGSIISTSQMNEESKESSNSLNQNLSINTSERIELLQREINVVRELLELEPDS-----KYCLQTLANLLSEL--KSNVKEDSKKIDDEIVTICDRLIKIDKFRTKRYEDL 344          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|585175681|ref|XP_006739635.1| (PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X1 [Leptonychotes weddellii] >gi|585175683|ref|XP_006739636.1| PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X2 [Leptonychotes weddellii])

HSP 1 Score: 165.622 bits (418), Expect = 4.103e-42
Identity = 115/334 (34.43%), Postives = 169/334 (50.60%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLD-------PPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVL 327
            MHGR K    +T   +++A++   + K+  Y+   +   Q+RQ           GE  ++ L L+SQ+L  NPD  TLWN R+E++                      + E  K+P    + ++TEL  +  C+R NPKSYG WHHR WL                         L R  +P   +EL LCA+ L++DERNFHCW YRR+V ++ P   P +E  F+ S I +NFSNYS++H+R+      L + HP  D       P   L +EL++VQ A FT+P+DQ+AW+YH+ L+  A   D  R   +  R +  LT   VSF++ VL
Sbjct:    1 MHGRLK---VKTSEEQAEAKRLEREQKLKLYQSATQTVFQKRQ----------AGELDESVLELTSQILGANPDFATLWNCRREVL---------------------QQLEAQKSPEELAALVKTELGFLESCLRVNPKSYGTWHHRCWL-------------------------LGRLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAPV-PPAEELAFTDSLITRNFSNYSSWHYRSC----LLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRADPQDALRCLHVS-RDEACLT---VSFSRPVL 266          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|1212200989|ref|XP_021551156.1| (geranylgeranyl transferase type-2 subunit alpha [Neomonachus schauinslandi] >gi|1212200991|ref|XP_021551157.1| geranylgeranyl transferase type-2 subunit alpha [Neomonachus schauinslandi] >gi|1212200993|ref|XP_021551158.1| geranylgeranyl transferase type-2 subunit alpha [Neomonachus schauinslandi] >gi|1212200995|ref|XP_021551159.1| geranylgeranyl transferase type-2 subunit alpha [Neomonachus schauinslandi])

HSP 1 Score: 165.236 bits (417), Expect = 4.450e-42
Identity = 115/334 (34.43%), Postives = 169/334 (50.60%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLD-------PPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVL 327
            MHGR K    +T   +++A++   + K+  Y+   +   Q+RQ           GE  ++ L L+SQ+L  NPD  TLWN R+E++                      + E  K+P    + ++TEL  +  C+R NPKSYG WHHR WL                         L R  +P   +EL LCA+ L++DERNFHCW YRR+V ++ P   P +E  F+ S I +NFSNYS++H+R+      L + HP  D       P   L +EL++VQ A FT+P+DQ+AW+YH+ L+  A   D  R   +  R +  LT   VSF++ VL
Sbjct:    1 MHGRLK---VKTSEEQAEAKRLEREQKLKLYQSATQTVFQKRQ----------AGELDESVLELTSQILGANPDFATLWNCRREVL---------------------QQLEAQKSPEELAALVKTELGFLESCLRVNPKSYGTWHHRCWL-------------------------LGRLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAPV-PPAEELAFTDSLITRNFSNYSSWHYRSC----LLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRADPQDALRCLHVS-RDEACLT---VSFSRPVL 266          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|511867850|ref|XP_004755277.1| (PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X3 [Mustela putorius furo])

HSP 1 Score: 165.236 bits (417), Expect = 4.999e-42
Identity = 115/334 (34.43%), Postives = 170/334 (50.90%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLD-------PPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVL 327
            MHGR K    +T   +++A++   + K+  Y+   +   Q+RQ           GE  ++ L L+SQ+L  NPD  TLWN R+E++                      + E  K+P    + ++TEL  +  C+R NPKSYG WHHR WL                         LSR  +P   +EL LCA+ L++DERNFHCW YRR+V ++  A  P +E  F+ S I +NFSNYS++H+R+      L + HP  D       P   L +EL++VQ A FT+P+DQ+AW+YH+ L+  A   D  R   +  R +  LT   VSF++ +L
Sbjct:    1 MHGRLK---VKTSEEQAKAKRLEREQKLKLYQSATQTVFQKRQ----------AGELDESVLELTSQILGANPDFATLWNCRREVL---------------------QQLEAQKSPEELAALVKTELGFLESCLRVNPKSYGTWHHRCWL-------------------------LSRLPEPNWARELELCARFLEVDERNFHCWDYRRFVATQ-AAVPPAEELAFTDSLITRNFSNYSSWHYRSC----LLPQLHPQPDSGSQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRADPQDALRCLHVS-RDEACLT---VSFSRPIL 266          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|511867841|ref|XP_004755274.1| (PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X1 [Mustela putorius furo] >gi|511867844|ref|XP_004755275.1| PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X1 [Mustela putorius furo])

HSP 1 Score: 164.851 bits (416), Expect = 6.219e-42
Identity = 115/334 (34.43%), Postives = 170/334 (50.90%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLD-------PPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVL 327
            MHGR K    +T   +++A++   + K+  Y+   +   Q+RQ           GE  ++ L L+SQ+L  NPD  TLWN R+E++                      + E  K+P    + ++TEL  +  C+R NPKSYG WHHR WL                         LSR  +P   +EL LCA+ L++DERNFHCW YRR+V ++  A  P +E  F+ S I +NFSNYS++H+R+      L + HP  D       P   L +EL++VQ A FT+P+DQ+AW+YH+ L+  A   D  R   +  R +  LT   VSF++ +L
Sbjct:    1 MHGRLK---VKTSEEQAKAKRLEREQKLKLYQSATQTVFQKRQ----------AGELDESVLELTSQILGANPDFATLWNCRREVL---------------------QQLEAQKSPEELAALVKTELGFLESCLRVNPKSYGTWHHRCWL-------------------------LSRLPEPNWARELELCARFLEVDERNFHCWDYRRFVATQ-AAVPPAEELAFTDSLITRNFSNYSSWHYRSC----LLPQLHPQPDSGSQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRADPQDALRCLHVS-RDEACLT---VSFSRPIL 266          
BLAST of EWM22438.1 vs. NCBI_GenBank
Match: gi|325181585|emb|CCA16035.1| (geranylgeranyl transferase type2 subunit alpha putat [Albugo laibachii Nc14])

HSP 1 Score: 158.688 bits (400), Expect = 1.721e-41
Identity = 127/400 (31.75%), Postives = 198/400 (49.50%), Query Frame = 0
Query:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVLEKEVKVLREL-VEEGEAEGGGYRWAVLTLADLLGKLARRKEGKSEEASLRAESQKLLKRLP-ALDPDHAGRYQ 398
            MHGR K   +     +++ ++    NKV  YK ++   L+ ++E  +  +A V           +  LL +N + + +W +R+E+I  S +L +E E  +T      S  E GK           EL L  + +++NPKSY AW HR+W+LD                         + L   + +E+ LC KLLDLDERNFHCW+YRR+ V+K       +E +FST +I +NFSNYSA HHR+         + P       +  E+++VQQAVFTEPDDQ+ W+Y++ LI  A+  D E  + + E      + +  SF    +  ++  +REL V E  A     +W ++TLADL G+L        +    R + + L ++L   +D DH   Y+
Sbjct:    1 MHGRVKSVERAIDEKKTEDDRVEDLNKVRMYKDIVSKVLRLKKESVY--DAQVALPL-------TRHLLLLNQEFHIVWGYRREII--SHILEKE-ESTDT------SNLELGKE----------ELKLTFEALQRNPKSYAAWFHRQWVLD-------------------------KNLVENVQKEILLCEKLLDLDERNFHCWNYRRY-VAKKLGMGAEEELQFSTIKIEQNFSNYSALHHRSI--------SLPVPLTKDIILEEINLVQQAVFTEPDDQSVWFYYRWLIQNAV--DLENNETVSE------SCQLHSF----IHSQITWVRELYVMEASA-----KWVIVTLADLYGRLCIYTTNGDDIQETREKCRALYRKLSDHIDQDHKHYYE 321          
The following BLAST results are available for this feature:
BLAST of EWM22438.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102944|gb|EWM22438.1|0.000e+0100.00geranylgeranyl transferase type-2 subunit alpha [N... [more]
gi|553181255|ref|XP_005853534.1|1.900e-90100.00rab alpha subunit, partial [Nannochloropsis gadita... [more]
gi|299116084|emb|CBN74500.1|2.074e-4830.00Rab geranylgeranyltransferase alpha [Ectocarpus si... [more]
gi|926638497|ref|XP_013785268.1|1.934e-4437.37PREDICTED: geranylgeranyl transferase type-2 subun... [more]
gi|552940696|gb|ESA23690.1|2.399e-4230.34hypothetical protein GLOINDRAFT_104680 [Rhizophagu... [more]
gi|585175681|ref|XP_006739635.1|4.103e-4234.43PREDICTED: geranylgeranyl transferase type-2 subun... [more]
gi|1212200989|ref|XP_021551156.1|4.450e-4234.43geranylgeranyl transferase type-2 subunit alpha [N... [more]
gi|511867850|ref|XP_004755277.1|4.999e-4234.43PREDICTED: geranylgeranyl transferase type-2 subun... [more]
gi|511867841|ref|XP_004755274.1|6.219e-4234.43PREDICTED: geranylgeranyl transferase type-2 subun... [more]
gi|325181585|emb|CCA16035.1|1.721e-4131.75geranylgeranyl transferase type2 subunit alpha put... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8282rna8282Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications